Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H03
         (226 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    22   2.3  
U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...    22   3.1  
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    22   3.1  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    22   3.1  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    21   5.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    21   5.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            20   9.4  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 66  IPLLIKRNKHAHRF 25
           I  L+KR+KH H F
Sbjct: 203 IDALLKRHKHQHEF 216


>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 61  RYILIYDRLHKMGKVKKLK 117
           R ILI  R+H++ +  K+K
Sbjct: 114 RLILIESRIHRLARYYKIK 132


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
          protein AgamOBP42 protein.
          Length = 288

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 45 NKHAHRFYKYLVPNY 1
          N   HR Y+YL+ NY
Sbjct: 45 NLPKHRLYQYLMYNY 59


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
          protein OBPjj83d protein.
          Length = 288

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 45 NKHAHRFYKYLVPNY 1
          N   HR Y+YL+ NY
Sbjct: 45 NLPKHRLYQYLMYNY 59


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -1

Query: 91  YVNDRILKYTFI 56
           +VND ++++TFI
Sbjct: 263 FVNDLVIRFTFI 274


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 155 IEAGNTVKSKNRSKERN 205
           ++AG T KS NR+  R+
Sbjct: 564 VQAGRTAKSFNRTNGRD 580


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 64  YILIYDRLHKMGKVKKLKPSQVGK 135
           YI +  RLH + +    KPS   K
Sbjct: 136 YIGVISRLHSVVEFSSAKPSDPRK 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,351
Number of Sequences: 2352
Number of extensions: 3550
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 51
effective length of database: 444,027
effective search space used: 10212621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)