Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H03
         (226 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   2.5  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    21   2.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   5.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    19   9.9  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 217 IIESVSFFTSILGFYSVSCLYLIRKCYF 134
           IIE + F   +   Y +SCL  I K  F
Sbjct: 51  IIEILQFILDVRLDYRISCLLSIFKQEF 78


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 217 IIESVSFFTSILGFYSVSCLYLIRKCYF 134
           IIE + F   +   Y +SCL  I K  F
Sbjct: 19  IIEILQFILDVRLDYRISCLLSIFKQEF 46


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 143 LADQIEAGNTVKSKNRSKERNRLDD 217
           L D+  AGN   +    KE+N  +D
Sbjct: 142 LFDEKNAGNNKITMKSKKEQNAEED 166


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -1

Query: 190 SILGFYSVSCLYLIRKCYFYRLV 122
           ++LG       Y I   YF+ +V
Sbjct: 443 NVLGVQGALLSYFIEPIYFHSIV 465



 Score = 18.6 bits (36), Expect = 9.9
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 205 VSFFTSILGFYSVSCLYLIRKCYFYRLV 122
           +S+F   + F+S+    L+   + YR V
Sbjct: 452 LSYFIEPIYFHSIVLGSLLNPSHMYRAV 479


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,971
Number of Sequences: 438
Number of extensions: 931
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3533460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)