Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G24
(288 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 192 6e-52
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 192 6e-52
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 192 6e-52
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 187 3e-50
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 32 0.001
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 3.0
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 20 5.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 5.3
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 20 7.0
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 20 7.0
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 19 9.2
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 19 9.2
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 19 9.2
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 19 9.2
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 192 bits (469), Expect = 6e-52
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = +3
Query: 3 TRIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 182
T IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ
Sbjct: 15 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 74
Query: 183 LIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIG 287
LIVGVNKMDSTEPPYSE+RFEEIKKEVSSYIKKIG
Sbjct: 75 LIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIG 109
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 192 bits (469), Expect = 6e-52
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = +3
Query: 3 TRIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 182
T IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ
Sbjct: 31 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 90
Query: 183 LIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIG 287
LIVGVNKMDSTEPPYSE+RFEEIKKEVSSYIKKIG
Sbjct: 91 LIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIG 125
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 192 bits (469), Expect = 6e-52
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = +3
Query: 3 TRIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 182
T IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 147
Query: 183 LIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIG 287
LIVGVNKMDSTEPPYSE+RFEEIKKEVSSYIKKIG
Sbjct: 148 LIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIG 182
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 187 bits (455), Expect = 3e-50
Identities = 90/95 (94%), Positives = 92/95 (96%)
Frame = +3
Query: 3 TRIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 182
T IDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGVKQ
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQ 147
Query: 183 LIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIG 287
LIVGVNKMD T+PPYSE+RFEEIKKEVSSYIKKIG
Sbjct: 148 LIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIG 182
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 32.3 bits (70), Expect = 0.001
Identities = 27/84 (32%), Positives = 37/84 (44%)
Frame = +3
Query: 3 TRIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 182
T +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 196 TFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV-P 247
Query: 183 LIVGVNKMDSTEPPYSESRFEEIK 254
+IV +NK+D + ++E K
Sbjct: 248 IIVAINKIDKPNIDIIKVQYELAK 271
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 3.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 225 YSESRFEEIKKEVS 266
Y E R+EEI+++ S
Sbjct: 17 YGEDRWEEIRRQAS 30
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 20.2 bits (40), Expect = 5.3
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 41 EHDHWNVSS*LRRAYCRRWYW*IRSRYLKER 133
E +WN ++ LR + WY +++ K R
Sbjct: 22 EGSNWNWNTLLRPNFLDGWYQTLQTHMKKVR 52
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.2 bits (40), Expect = 5.3
Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 211 ESILFTPTISCL-TPSVKASRACSRVCPFFEIPASNSPVPAATI 83
+S++ T + + TP+ P +PAS++ + + T+
Sbjct: 828 QSVVVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSINSITV 871
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 19.8 bits (39), Expect = 7.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2
Query: 107 FTSTSGDNKH 78
FTS+SGDN +
Sbjct: 48 FTSSSGDNTY 57
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 19.8 bits (39), Expect = 7.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2
Query: 107 FTSTSGDNKH 78
FTS+SGDN +
Sbjct: 50 FTSSSGDNTY 59
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 19.4 bits (38), Expect = 9.2
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 41 EHDHWNVSS*LRRAYCRRWYW*IRS 115
E +WN ++ LR + WY ++S
Sbjct: 66 EGSNWNWNTLLRPNFLDGWYQTLQS 90
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 19.4 bits (38), Expect = 9.2
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 41 EHDHWNVSS*LRRAYCRRWYW*IRS 115
E +WN ++ LR + WY ++S
Sbjct: 66 EGSNWNWNTLLRPNFLDGWYQTLQS 90
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 19.4 bits (38), Expect = 9.2
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 41 EHDHWNVSS*LRRAYCRRWYW*IRS 115
E +WN ++ LR + WY ++S
Sbjct: 66 EGSNWNWNTLLRPNFLDGWYQTLQS 90
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 19.4 bits (38), Expect = 9.2
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -1
Query: 237 ETHCMVAQWSPFCLLL 190
E+HCM ++ F L +
Sbjct: 76 ESHCMTITFASFLLFI 91
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,129
Number of Sequences: 438
Number of extensions: 1293
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5744526
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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