Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_G22
         (264 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    20   4.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    20   4.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   4.5  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    19   7.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    19   7.8  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 210 DVVAPDATVRALTEVAKPR 154
           D  AP+A  R +  V KPR
Sbjct: 380 DPTAPNAEERRVQGVTKPR 398


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 210 DVVAPDATVRALTEVAKPR 154
           D  AP+A  R +  V KPR
Sbjct: 295 DPTAPNAEERRVQGVTKPR 313


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 210 DVVAPDATVRALTEVAKPR 154
           D  AP+A  R +  V KPR
Sbjct: 614 DPTAPNAEERRVQGVTKPR 632


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 63  NQRNEDRASGGP 98
           + RN DR++G P
Sbjct: 189 SSRNSDRSAGSP 200


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +1

Query: 52  TKSLTSVTKTELQEAHIHAIFSQPDNAISTLSFFTRLR-DLGKRADG 189
           TKSL S+T  E     +  +    +N   +  F  RLR +L  +  G
Sbjct: 458 TKSLASLTDAENSRRAMENLGDGRNNKEDSEEFRQRLRKELDSKTGG 504


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,630
Number of Sequences: 438
Number of extensions: 1176
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4887441
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)