Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G21
(294 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 72 2e-14
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 72 2e-14
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 72 2e-14
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 72 2e-14
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 72 2e-14
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 72 2e-14
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 72 2e-14
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 72 2e-14
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 72 2e-14
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 72 2e-14
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 72 2e-14
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 28 0.25
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 26 1.3
SPAC17A5.05c |||conserved fungal protein|Schizosaccharomyces pom... 25 1.8
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 25 2.3
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 25 3.1
SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S... 24 4.0
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 24 5.3
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 24 5.3
SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog 1|Schizosa... 24 5.3
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 23 7.1
SPCC794.01c |||glucose-6-phosphate 1-dehydrogenase |Schizosaccha... 23 7.1
SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe... 23 7.1
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 23 9.3
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.1 bits (169), Expect = 2e-14
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G +N+ RKFIP + + PL+N+L
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNLL 670
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 72.1 bits (169), Expect = 2e-14
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G +N+ RKFIP + + PL+N+L
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNLL 670
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.1 bits (169), Expect = 2e-14
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G +N+ RKFIP + + PL+N+L
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNLL 670
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.1 bits (169), Expect = 2e-14
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G +N+ RKFIP + + PL+N+L
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNLL 670
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 72.1 bits (169), Expect = 2e-14
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G +N+ RKFIP + + PL+N+L
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNLL 670
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.1 bits (169), Expect = 2e-14
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G +N+ RKFIP + + PL+N+L
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNLL 670
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.1 bits (169), Expect = 2e-14
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G +N+ RKFIP + + PL+N+L
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNLL 670
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 72.1 bits (169), Expect = 2e-14
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G +N+ RKFIP + + PL+N+L
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNLL 670
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 72.1 bits (169), Expect = 2e-14
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G +N+ RKFIP + + PL+N+L
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNLL 670
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.1 bits (169), Expect = 2e-14
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G +N+ RKFIP + + PL+N+L
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNLL 670
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 72.1 bits (169), Expect = 2e-14
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G +N+ RKFIP + + PL+N+L
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNLL 670
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 28.3 bits (60), Expect = 0.25
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 46 KSQLGVPEVEFLGFTVTAAGIK---PTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFI 216
K + VP+ L F + AG+K P +KV +L +R N +R + R
Sbjct: 78 KGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVE 137
Query: 217 PYAAHVQAPLHNI 255
PY + LH++
Sbjct: 138 PYVMYGIPNLHSV 150
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 25.8 bits (54), Expect = 1.3
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 61 VPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYAAHVQA 240
V +V F V AG+K T + ++ + T ++R + + N YR + + Q
Sbjct: 832 VSDVSFSSIRVNIAGVKITAKSSTSNSSSTAEYHVRSRHAVIPVNNRYRSAVVFEFRKQL 891
Query: 241 P-LHNILS 261
HN+ +
Sbjct: 892 QRKHNVFA 899
>SPAC17A5.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 168 SYIFRTCII*YCTDLLCRWLNTCSSHRKTQ 79
S +F TC Y + CRWL H+K +
Sbjct: 177 SKLFSTC---YALSVQCRWLLVLGPHKKPE 203
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 30 THQLREISTWRS*SGISGFYG 92
TH+LR+ ++WR+ GI+ +G
Sbjct: 169 THKLRKTASWRTSFGINMLWG 189
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 24.6 bits (51), Expect = 3.1
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 30 THQLREISTWRS*SGISGFYG 92
TH+LR+ ++WR+ GI+ +G
Sbjct: 169 THKLRKTASWRTSFGINILWG 189
>SPAC3H1.04c |mdm31||mitochondrial inner membrane protein
Mdm31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.2 bits (50), Expect = 4.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 172 LRRYLGMLNFYRKFIPYAAHVQAPL 246
+R + +N R FIP HV PL
Sbjct: 504 IRPIIAYINSTRTFIPILCHVSKPL 528
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 160 NIRELRRYLGMLNFYRKFIPYAAHVQAPLHN 252
N R ++ L +NF RK+I YA P+ N
Sbjct: 571 NARTKKKELLNINFVRKYIQYAKSRIHPILN 601
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 23.8 bits (49), Expect = 5.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 16 HEHGVLINCAKSQLGVPEVEF 78
HE+G L+ CA S V +EF
Sbjct: 110 HEYGALLACASSDGKVSVLEF 130
>SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 941
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3
Query: 207 EIHSLCSPCTSSSA 248
EIHSL SP SSSA
Sbjct: 457 EIHSLLSPLESSSA 470
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 23.4 bits (48), Expect = 7.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 4 QERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAG 105
++R+ EH +L+ C KS + E + + +AAG
Sbjct: 514 EDRVSEHMLLLECEKSDVVEVPYECILTSSSAAG 547
>SPCC794.01c |||glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 475
Score = 23.4 bits (48), Expect = 7.1
Identities = 11/47 (23%), Positives = 21/47 (44%)
Frame = +1
Query: 103 GIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYAAHVQAP 243
G+ PT + ++ PK L+ ++ F R+ +P V+ P
Sbjct: 351 GMFPTVDSSNVLVLRVYPKEFIALKGHIKQPGFSRQIVPVTLDVKYP 397
>SPAPB1A11.04c |||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 23.4 bits (48), Expect = 7.1
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -1
Query: 138 YCTDLLCRWLNTCSSHRKTQKFHFRNAKLRFRAIDEYTMF 19
Y D+ WLN HR + + L RA+ YT +
Sbjct: 374 YTKDITPPWLNQSQFHRSFELLKAWHENLPPRAVWSYTNY 413
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 23.0 bits (47), Expect = 9.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 120 CRWLNTCSSHRKTQKFHF 67
C WLNTC R+ +++F
Sbjct: 212 CIWLNTCIG-RRNYRYYF 228
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,211,700
Number of Sequences: 5004
Number of extensions: 22315
Number of successful extensions: 63
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 71828050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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