Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G21
(294 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 71 2e-13
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 70 6e-13
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 67 4e-12
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 66 5e-12
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 65 1e-11
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 65 1e-11
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 64 2e-11
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 62 9e-11
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 62 1e-10
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 62 1e-10
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 60 4e-10
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 60 4e-10
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 58 2e-09
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 58 3e-09
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 58 3e-09
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 58 3e-09
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 56 1e-08
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 56 1e-08
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 56 1e-08
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 56 1e-08
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 56 1e-08
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 56 1e-08
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 56 1e-08
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 53 5e-08
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 53 7e-08
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 47 5e-06
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 47 5e-06
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 44 2e-05
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 44 2e-05
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 44 4e-05
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 44 4e-05
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 29 1.3
BT011141-1|AAR82809.1| 520|Drosophila melanogaster GM02206p pro... 28 1.8
BT001894-1|AAN71683.1| 1047|Drosophila melanogaster SD17880p pro... 28 1.8
AE014135-25|AAN06556.2| 1314|Drosophila melanogaster CG32000-PB,... 28 1.8
AE014135-24|AAN06554.2| 1314|Drosophila melanogaster CG32000-PA,... 28 1.8
AE014135-22|AAS64610.1| 1388|Drosophila melanogaster CG32000-PG,... 28 1.8
BT011394-1|AAR96186.1| 867|Drosophila melanogaster AT28069p pro... 28 2.3
BT010119-1|AAQ22588.1| 1042|Drosophila melanogaster AT28434p pro... 28 2.3
BT001265-1|AAN71021.1| 561|Drosophila melanogaster AT04085p pro... 28 2.3
AE013599-2271|AAM68521.1| 466|Drosophila melanogaster CG6262-PC... 28 2.3
AE013599-2270|AAF58004.3| 867|Drosophila melanogaster CG6262-PB... 28 2.3
AE013599-2267|AAF58003.2| 1042|Drosophila melanogaster CG6262-PA... 28 2.3
AE013599-1472|AAF58520.1| 166|Drosophila melanogaster CG8836-PA... 27 4.0
AY060332-1|AAL25371.1| 304|Drosophila melanogaster GH22139p pro... 26 7.1
AE013599-822|AAM68821.1| 304|Drosophila melanogaster CG8026-PB,... 26 7.1
AE013599-821|AAF58969.1| 360|Drosophila melanogaster CG8026-PA,... 26 7.1
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 71.3 bits (167), Expect = 2e-13
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +1
Query: 13 LHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGM 192
L + + +N KS +VEFLG+ VTA GIK +KV A+ P +++EL+R+LGM
Sbjct: 305 LSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGM 364
Query: 193 LNFYRKFIPYAAHVQAPLHNILSG 264
++YRKFI A V PL N+ G
Sbjct: 365 TSYYRKFIQDYAKVAKPLTNLTRG 388
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 69.7 bits (163), Expect = 6e-13
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +1
Query: 10 RLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLG 189
+L E + + K + E EFLG +T GIKP K+ AV+N+ PK+ +E++ +LG
Sbjct: 376 KLREANLKLQLDKCEFLKKETEFLGHIITTDGIKPNPAKIKAVVNFPIPKSTKEIKSFLG 435
Query: 190 MLNFYRKFIPYAAHVQAPL 246
+ FYRKFIP A + P+
Sbjct: 436 LCGFYRKFIPNFAKIAKPM 454
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 66.9 bits (156), Expect = 4e-12
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
E+L + + + K + E EFLG VT GIKP K A+ N+ PK ++++ +L
Sbjct: 460 EKLRDANLKLQLDKCEFMKKETEFLGHIVTTNGIKPNPNKTKAITNFPLPKTPKQIKSFL 519
Query: 187 GMLNFYRKFIPYAAHVQAPL 246
G+ FYRKFIP A + P+
Sbjct: 520 GLCGFYRKFIPNFAKIVKPM 539
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 66.5 bits (155), Expect = 5e-12
Identities = 32/87 (36%), Positives = 49/87 (56%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
E+L + +KS+ E+EFLG VT G+KP K+SA+ + P N R ++ +L
Sbjct: 496 EKLRAANFKLQPSKSEFLRKEIEFLGHIVTQDGVKPNPNKISAIKKFPCPTNRRAIKSFL 555
Query: 187 GMLNFYRKFIPYAAHVQAPLHNILSGQ 267
G+L +YRKFI A + P+ L G+
Sbjct: 556 GLLGYYRKFIRDFARITKPMTKQLKGK 582
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/67 (41%), Positives = 46/67 (68%)
Frame = +1
Query: 67 EVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYAAHVQAPL 246
+VEFLGF V+ GI+ + KV A+ ++ P+ ++ELR +LG+ +YR+FIP A + PL
Sbjct: 395 KVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRSFLGLSGYYRRFIPNYAKLAKPL 454
Query: 247 HNILSGQ 267
++L G+
Sbjct: 455 SSLLRGE 461
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/67 (41%), Positives = 46/67 (68%)
Frame = +1
Query: 67 EVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYAAHVQAPL 246
+VEFLGF V+ GI+ + KV A+ ++ P+ ++ELR +LG+ +YR+FIP A + PL
Sbjct: 239 KVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRSFLGLSGYYRRFIPNYAKLAKPL 298
Query: 247 HNILSGQ 267
++L G+
Sbjct: 299 SSLLRGE 305
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 64.5 bits (150), Expect = 2e-11
Identities = 31/85 (36%), Positives = 49/85 (57%)
Frame = +1
Query: 13 LHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGM 192
L++ + I+ KS+ V FLGF VT G +KV A+ + PKN+ E+R +LG+
Sbjct: 341 LYDANMRISAEKSRFFKKSVSFLGFIVTNNGAATDPEKVKAIKEFPEPKNVFEVRSFLGL 400
Query: 193 LNFYRKFIPYAAHVQAPLHNILSGQ 267
++YR FI A + P+ +IL G+
Sbjct: 401 ASYYRCFIKDFASIARPISDILKGE 425
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 62.5 bits (145), Expect = 9e-11
Identities = 31/87 (35%), Positives = 50/87 (57%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
+RL + ++ KS VE+LGF V++ GI + KV A+ Y +P N+ +R +L
Sbjct: 368 DRLSGANMRVSKEKSFFFKESVEYLGFMVSSGGITTSPSKVEAIQKYNQPTNLFSVRSFL 427
Query: 187 GMLNFYRKFIPYAAHVQAPLHNILSGQ 267
G+ ++YR FI A + PL +IL G+
Sbjct: 428 GLASYYRCFIKDFASIARPLTDILKGE 454
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 62.1 bits (144), Expect = 1e-10
Identities = 34/94 (36%), Positives = 50/94 (53%)
Frame = +1
Query: 10 RLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLG 189
+L + + + K + E FLG VT GIKP KV A+++Y P +E+R +LG
Sbjct: 387 KLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLG 446
Query: 190 MLNFYRKFIPYAAHVQAPLHNILSGQCLKATTLI 291
+ +YRKFIP A + P+ + CLK T I
Sbjct: 447 LTGYYRKFIPNYADIAKPMTS-----CLKKRTKI 475
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 62.1 bits (144), Expect = 1e-10
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
E+L + + + K + E FLG +T GIKP +K+ A+ +Y P +E++ +L
Sbjct: 349 EKLSQANLKLQLDKCEFLRQETTFLGHVITKDGIKPNPEKIKAIQDYPLPSKPKEIKAFL 408
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G+ +YRKFIP + + PL L
Sbjct: 409 GITGYYRKFIPNFSDIAKPLTKCL 432
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 60.5 bits (140), Expect = 4e-10
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
E+L + + + K + E FLG +T GIKP +K+ A+ Y P +E++ +L
Sbjct: 387 EKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFL 446
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G+ +YRKFIP A + P+ L
Sbjct: 447 GLTGYYRKFIPNFADIAKPMTKCL 470
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 60.5 bits (140), Expect = 4e-10
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +1
Query: 76 FLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYAAHVQAPLHNI 255
FLG V+ GI+P +K+ A+ NY P +E++ +LG+ FYRKFIP+ A + PL
Sbjct: 357 FLGHMVSPEGIRPNPEKLRAIENYPLPTKPKEIKSFLGLTGFYRKFIPHFAQIAKPLTTC 416
Query: 256 L 258
L
Sbjct: 417 L 417
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 58.0 bits (134), Expect = 2e-09
Identities = 28/85 (32%), Positives = 44/85 (51%)
Frame = +1
Query: 10 RLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLG 189
RL + KS E EFLG V+ G++P K+ A+ N+ P + + ++ +LG
Sbjct: 383 RLRSANFKVQLTKSYFLRRETEFLGHIVSQEGVRPNPNKIEAIKNFPCPHSKKSIKSFLG 442
Query: 190 MLNFYRKFIPYAAHVQAPLHNILSG 264
+L +YRKFI A + P+ L G
Sbjct: 443 LLGYYRKFIRDFARLTQPMTQKLRG 467
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 57.6 bits (133), Expect = 3e-09
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
+R E G+ I K + FLG + I P +K SAV ++ P+N++ ++ +L
Sbjct: 664 KRAAEFGLKIKWKKCNFMQRRIHFLGHIIEGGQICPGKEKTSAVNSFGTPQNVKAVQGFL 723
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G+ F+RKFIP A + PL ++L
Sbjct: 724 GLTGFFRKFIPGYAQIARPLTDLL 747
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 57.6 bits (133), Expect = 3e-09
Identities = 24/84 (28%), Positives = 49/84 (58%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
+RL E+ + + K + +++LGF + GI P + + A+ N+ P N+ ++ +L
Sbjct: 892 KRLVENKLELRIDKCEFMQSSIKYLGFIINKDGIMPNDKGIEAIKNFPIPNNVHTVQSFL 951
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G+ +++R+FI + + PLH+IL
Sbjct: 952 GLCSYFRRFIKDFSRLAKPLHDIL 975
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 57.6 bits (133), Expect = 3e-09
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
+R E G+ I K + FLG + I P +K SAV ++ P+N++ ++ +L
Sbjct: 358 KRAAEFGLKIKWKKCNFMQRRIHFLGHIIEGGQICPGKEKTSAVNSFGTPQNVKAVQGFL 417
Query: 187 GMLNFYRKFIPYAAHVQAPLHNIL 258
G+ F+RKFIP A + PL ++L
Sbjct: 418 GLTGFFRKFIPGYAQIARPLTDLL 441
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/84 (27%), Positives = 50/84 (59%)
Frame = +1
Query: 13 LHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGM 192
L + G N AK V++LG+ V A I+P +K++++ + P+ + +R+++G+
Sbjct: 623 LTKAGFTFNLAKCSFLKTTVQYLGYEVRAGEIRPNVRKIASLSSLPPPQTVSGVRQFIGL 682
Query: 193 LNFYRKFIPYAAHVQAPLHNILSG 264
+++RKF+ + + PL+++ SG
Sbjct: 683 ASYFRKFVSGFSQLMKPLYSLSSG 706
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +1
Query: 46 KSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYA 225
K++ VE+LGF V+ G K +KV A+ Y P + ++R +LG+ ++YR FI
Sbjct: 355 KTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDF 414
Query: 226 AHVQAPLHNILSGQ 267
A + P+ +IL G+
Sbjct: 415 AAIARPITDILKGE 428
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +1
Query: 46 KSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYA 225
K++ VE+LGF V+ G K +KV A+ Y P + ++R +LG+ ++YR FI
Sbjct: 350 KTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDF 409
Query: 226 AHVQAPLHNILSGQ 267
A + P+ +IL G+
Sbjct: 410 AAIARPITDILKGE 423
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +1
Query: 46 KSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYA 225
K++ VE+LGF V+ G K +KV A+ Y P + ++R +LG+ ++YR FI
Sbjct: 385 KTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDF 444
Query: 226 AHVQAPLHNILSGQ 267
A + P+ +IL G+
Sbjct: 445 AAIARPITDILKGE 458
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +1
Query: 46 KSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYA 225
K++ VE+LGF V+ G K +KV A+ Y P + ++R +LG+ ++YR FI
Sbjct: 350 KTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDF 409
Query: 226 AHVQAPLHNILSGQ 267
A + P+ +IL G+
Sbjct: 410 AAIARPITDILKGE 423
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +1
Query: 46 KSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYA 225
K++ VE+LGF V+ G K +KV A+ Y P + ++R +LG+ ++YR FI
Sbjct: 350 KTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDF 409
Query: 226 AHVQAPLHNILSGQ 267
A + P+ +IL G+
Sbjct: 410 AAIARPITDILKGE 423
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +1
Query: 46 KSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYA 225
K++ VE+LGF V+ G K +KV A+ Y P + ++R +LG+ ++YR FI
Sbjct: 803 KTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDF 862
Query: 226 AHVQAPLHNILSGQ 267
A + P+ +IL G+
Sbjct: 863 AAIARPITDILKGE 876
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 53.2 bits (122), Expect = 5e-08
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = +1
Query: 46 KSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYA 225
K++ VE+LGF V+ G +KV A+ Y P + ++R +LG+ ++YR FI
Sbjct: 385 KTRFFTESVEYLGFIVSKDGTISDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDF 444
Query: 226 AHVQAPLHNILSGQ 267
A + P+ +IL G+
Sbjct: 445 AAIARPITDILKGE 458
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 52.8 bits (121), Expect = 7e-08
Identities = 20/67 (29%), Positives = 40/67 (59%)
Frame = +1
Query: 46 KSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPYA 225
K + E+EFLG T+ + G+KP+ +K+ A+ P N ++++ +LG+ + R++I
Sbjct: 325 KCEFAREEIEFLGHTINSEGLKPSQKKIDAICKINLPTNQKQIKSFLGITGYLRRYIKDY 384
Query: 226 AHVQAPL 246
+ + PL
Sbjct: 385 SKIAQPL 391
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 46.8 bits (106), Expect = 5e-06
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +1
Query: 10 RLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLG 189
+ E+ + ++ K + EV FLG T GI P +K + NY P + RR++
Sbjct: 496 KCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVA 555
Query: 190 MLNFYRKFI 216
N+YR+FI
Sbjct: 556 FCNYYRRFI 564
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 46.8 bits (106), Expect = 5e-06
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +1
Query: 10 RLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLG 189
+ E+ + ++ K + EV FLG T GI P +K + NY P + RR++
Sbjct: 259 KCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVA 318
Query: 190 MLNFYRKFI 216
N+YR+FI
Sbjct: 319 FCNYYRRFI 327
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 19 EHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLN 198
++ + ++ K + EV FLG T G+ P +K + NY P + RR++ N
Sbjct: 88 KYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDDKKYDVIKNYPVPHDADSARRFVAFCN 147
Query: 199 FYRKFI 216
+YR+FI
Sbjct: 148 YYRRFI 153
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 19 EHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLN 198
++ + ++ K + EV FLG T G+ P +K + NY P + RR++ N
Sbjct: 88 KYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDDKKYDVIKNYPVPHDADSARRFVAFCN 147
Query: 199 FYRKFI 216
+YR+FI
Sbjct: 148 YYRRFI 153
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 43.6 bits (98), Expect = 4e-05
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
E H + ++ K + EV +LG T GI P K + Y P + RR++
Sbjct: 250 ELCRRHNLKLHPGKCSFFMKEVTYLGHKCTDKGILPDDTKYEVIEKYPIPTDADSARRFV 309
Query: 187 GMLNFYRKFI 216
N+YR+FI
Sbjct: 310 AFCNYYRRFI 319
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 43.6 bits (98), Expect = 4e-05
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 7 ERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 186
E ++ + ++ K + EV FLG T GI P K A+ Y P + RR++
Sbjct: 389 ELCRKNNLKLHPDKCSFFMSEVTFLGHKCTDKGILPDDTKYDAIQRYPVPTDADSARRFV 448
Query: 187 GMLNFYRKFI 216
N+YR+FI
Sbjct: 449 AFCNYYRRFI 458
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 10 RLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAV 138
+L + I +K E++FLG VT G+KP K+ +
Sbjct: 365 KLQNANLKIQPSKCSFLRKEIDFLGHIVTQEGVKPNPLKIQTI 407
>BT011141-1|AAR82809.1| 520|Drosophila melanogaster GM02206p
protein.
Length = 520
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 70 VEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNI 165
+EFLGF + +KP T KV LN + + I
Sbjct: 426 MEFLGFVILENRLKPDTTKVINALNAAKIRTI 457
>BT001894-1|AAN71683.1| 1047|Drosophila melanogaster SD17880p
protein.
Length = 1047
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 70 VEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNI 165
+EFLGF + +KP T KV LN + + I
Sbjct: 802 MEFLGFVILENRLKPDTTKVINALNAAKIRTI 833
>AE014135-25|AAN06556.2| 1314|Drosophila melanogaster CG32000-PB,
isoform B protein.
Length = 1314
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 70 VEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNI 165
+EFLGF + +KP T KV LN + + I
Sbjct: 728 MEFLGFVILENRLKPDTTKVINALNAAKIRTI 759
>AE014135-24|AAN06554.2| 1314|Drosophila melanogaster CG32000-PA,
isoform A protein.
Length = 1314
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 70 VEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNI 165
+EFLGF + +KP T KV LN + + I
Sbjct: 728 MEFLGFVILENRLKPDTTKVINALNAAKIRTI 759
>AE014135-22|AAS64610.1| 1388|Drosophila melanogaster CG32000-PG,
isoform G protein.
Length = 1388
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 70 VEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNI 165
+EFLGF + +KP T KV LN + + I
Sbjct: 802 MEFLGFVILENRLKPDTTKVINALNAAKIRTI 833
>BT011394-1|AAR96186.1| 867|Drosophila melanogaster AT28069p
protein.
Length = 867
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 122 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCS 18
CV G P+ V ST+ T + DFAQ PCS
Sbjct: 411 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCS 444
>BT010119-1|AAQ22588.1| 1042|Drosophila melanogaster AT28434p
protein.
Length = 1042
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 122 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCS 18
CV G P+ V ST+ T + DFAQ PCS
Sbjct: 586 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCS 619
>BT001265-1|AAN71021.1| 561|Drosophila melanogaster AT04085p
protein.
Length = 561
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 122 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCS 18
CV G P+ V ST+ T + DFAQ PCS
Sbjct: 105 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCS 138
>AE013599-2271|AAM68521.1| 466|Drosophila melanogaster CG6262-PC,
isoform C protein.
Length = 466
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 122 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCS 18
CV G P+ V ST+ T + DFAQ PCS
Sbjct: 10 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCS 43
>AE013599-2270|AAF58004.3| 867|Drosophila melanogaster CG6262-PB,
isoform B protein.
Length = 867
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 122 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCS 18
CV G P+ V ST+ T + DFAQ PCS
Sbjct: 411 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCS 444
>AE013599-2267|AAF58003.2| 1042|Drosophila melanogaster CG6262-PA,
isoform A protein.
Length = 1042
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 122 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCS 18
CV G P+ V ST+ T + DFAQ PCS
Sbjct: 586 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCS 619
>AE013599-1472|AAF58520.1| 166|Drosophila melanogaster CG8836-PA
protein.
Length = 166
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 145 YTRPKNIRELRRYLGMLNFYRKFIPYAAHVQA 240
Y R +++ LRR+ FY+K+ PY A QA
Sbjct: 38 YYRNRDLYNLRRFYD--GFYKKYNPYIAAAQA 67
>AY060332-1|AAL25371.1| 304|Drosophila melanogaster GH22139p
protein.
Length = 304
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 163 IRELRRYLGMLNFYRKFIPYAAHV 234
I++ RY M FY+ +PY HV
Sbjct: 265 IKQTWRYERMRGFYKGLVPYLVHV 288
>AE013599-822|AAM68821.1| 304|Drosophila melanogaster CG8026-PB,
isoform B protein.
Length = 304
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 163 IRELRRYLGMLNFYRKFIPYAAHV 234
I++ RY M FY+ +PY HV
Sbjct: 265 IKQTWRYERMRGFYKGLVPYLVHV 288
>AE013599-821|AAF58969.1| 360|Drosophila melanogaster CG8026-PA,
isoform A protein.
Length = 360
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 163 IRELRRYLGMLNFYRKFIPYAAHV 234
I++ RY M FY+ +PY HV
Sbjct: 265 IKQTWRYERMRGFYKGLVPYLVHV 288
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,947,420
Number of Sequences: 53049
Number of extensions: 242946
Number of successful extensions: 764
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 506778984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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