Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_G21
         (294 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   1.4  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   1.4  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   1.4  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   1.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   3.1  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   4.2  

>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 221 MQPMYKLLCIISYQDNVLRL 280
           +QP++KL C  ++ + V+ L
Sbjct: 41  LQPLFKLACTDTFMEGVIVL 60


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 171 LSYIF-RTCII*YCTDLLCRWLNTCSSH 91
           +SYI+    I+    D  CR  +TCSSH
Sbjct: 96  ISYIYILMAILRMSADGGCRNFSTCSSH 123


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 171 LSYIF-RTCII*YCTDLLCRWLNTCSSH 91
           +SYI+    I+    D  CR  +TCSSH
Sbjct: 95  ISYIYILMAILRMSADGGCRNFSTCSSH 122


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 121 QKVSAVLNYTRPKNIRELRRYLG 189
           + VS V+NY  PK I E    +G
Sbjct: 518 KNVSHVINYDLPKGIDEYVHRIG 540


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 8/29 (27%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -1

Query: 117 RWLNTCSSHRKTQKFH--FRNAKLRFRAI 37
           RW+ +C  + K  K H  +++   R+ A+
Sbjct: 65  RWIFSCIGYYKLNKIHDAYKDLNQRYGAL 93


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 142 NYTRPKNIRELRRYL 186
           NY  P  + +L+RYL
Sbjct: 37  NYDHPTTLLKLKRYL 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,219
Number of Sequences: 438
Number of extensions: 1821
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5994288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)