Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_G19
         (136 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7AD8 Cluster: PREDICTED: similar to vegetable ...    31   6.6  
UniRef50_A6VFA6 Cluster: DNA methylase N-4/N-6 domain protein; n...    31   6.6  

>UniRef50_UPI0000DB7AD8 Cluster: PREDICTED: similar to vegetable
           CG6657-PA, isoform A; n=1; Apis mellifera|Rep:
           PREDICTED: similar to vegetable CG6657-PA, isoform A -
           Apis mellifera
          Length = 409

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 35  LFIKSNVAHTSVVAKYLLI*TICLFKLLIIYYD 133
           +F K NV H+SV+   +LI  IC  K  II+YD
Sbjct: 103 IFFKLNV-HSSVLIAAVLINIICFVKSAIIFYD 134


>UniRef50_A6VFA6 Cluster: DNA methylase N-4/N-6 domain protein; n=1;
           Methanococcus maripaludis C7|Rep: DNA methylase N-4/N-6
           domain protein - Methanococcus maripaludis C7
          Length = 1019

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 120 INNLNKQIV*ISKYFATTDVCATLDFMNKQRYKYIL 13
           + N  K++    K+  +TD C TLD ++K+ Y  IL
Sbjct: 369 VENFQKKLWEKKKFVVSTDYCITLDRIDKKHYSKIL 404


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,466,971
Number of Sequences: 1657284
Number of extensions: 1174180
Number of successful extensions: 1963
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1956
length of database: 575,637,011
effective HSP length: 25
effective length of database: 534,204,911
effective search space used: 10149893309
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)