Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G18
(211 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 31 0.13
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 31 0.17
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 31 0.17
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 30 0.22
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 29 0.39
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 28 0.90
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 28 1.2
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 27 1.6
03_02_0525 - 9138107-9138237,9138327-9139301,9139379-9139507,913... 27 1.6
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 27 2.1
11_08_0019 + 27697918-27698609,27701107-27701372,27701778-277019... 27 2.7
07_01_0043 + 343777-343953,345198-346716,346831-346977,347378-34... 27 2.7
01_06_1446 - 37409074-37409783,37409896-37409986,37410645-374119... 26 3.6
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 26 4.8
06_01_0943 + 7258740-7258809,7258883-7259100,7260023-7260558,726... 26 4.8
06_01_0768 + 5742938-5743196,5743291-5744729 26 4.8
02_05_0280 + 27435166-27435254,27436348-27436437,27436764-274368... 26 4.8
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 26 4.8
08_02_0139 + 13065468-13065902,13067196-13067279,13068221-13068499 25 6.3
02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,188... 25 6.3
01_06_1483 + 37683559-37683922,37684916-37685193,37685865-37686167 25 6.3
01_06_0767 + 31823659-31823734,31823859-31823979,31824078-318241... 25 6.3
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 25 8.4
03_01_0013 - 105281-105552,105762-105838,105839-106524,106655-10... 25 8.4
02_03_0318 - 17664121-17664522 25 8.4
01_07_0353 + 42962769-42962972,42963062-42963138,42963571-429638... 25 8.4
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 31.1 bits (67), Expect = 0.13
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQRMDTTGRTVL 110
++EE +++ K+KMVL+HLV+ R+ T G ++
Sbjct: 740 TIEERMMQLTKKKMVLEHLVVGRL-TKGTNIV 770
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 30.7 bits (66), Expect = 0.17
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
++EE ++ERA +K+ LD LVIQ+
Sbjct: 715 TIEEKVIERAYKKLALDALVIQQ 737
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 30.7 bits (66), Expect = 0.17
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
++EE ++ERA +K+ LD LVIQ+
Sbjct: 661 TIEEKVIERAYKKLALDALVIQQ 683
>05_01_0318 -
2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 30.3 bits (65), Expect = 0.22
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
S+EE+I++RAK+KM +D VIQ
Sbjct: 835 SIEEEILDRAKQKMGIDAKVIQ 856
>02_05_0366 - 28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 29.5 bits (63), Expect = 0.39
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
++EE+I+++A +K LD LVIQR
Sbjct: 1331 TIEENILKKANQKRALDDLVIQR 1353
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 28.3 bits (60), Expect = 0.90
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
SV+E+I E A+RK+VLD ++Q
Sbjct: 788 SVDENIYEIARRKLVLDAAILQ 809
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 47 KENGSRSPRHTADGYDGQNSVEQC 118
++N S P H D YDG SV C
Sbjct: 578 EDNSSSVPLHYVDNYDGIQSVSTC 601
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQRMDT 92
SVEE I+ AK+K++LD L + + ++
Sbjct: 1052 SVEERILHLAKKKLMLDQLFVNKSES 1077
>03_02_0525 -
9138107-9138237,9138327-9139301,9139379-9139507,
9139623-9139867,9139986-9140137,9140236-9140346
Length = 580
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 141 AVVAGRLPHCSTLFCPSYPSAV*RGDREPFSFSL 40
A AG +L CP YPS V R +PF F++
Sbjct: 341 AFAAGFAAKLRSLACPDYPSNVPRRVDKPFFFAV 374
>01_06_0116 -
26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 26 RYSRESEKENGSRSPRHTADGYDGQNSVEQCGSRPATTANN 148
RY K+NGS++ R DGY + E S NN
Sbjct: 267 RYDDGGAKKNGSKASRGEEDGYSYKRDTEINASATKEKYNN 307
>11_08_0019 +
27697918-27698609,27701107-27701372,27701778-27701948,
27702187-27703166,27703723-27703804,27704148-27704170
Length = 737
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 12 RSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNNAGAVL 131
+S++ED+ ER K VL+HL + R T +G +L
Sbjct: 682 QSLKEDVDERPTMKHVLEHLHLARSMIPKSTSGQQSGRIL 721
>07_01_0043 +
343777-343953,345198-346716,346831-346977,347378-347940
Length = 801
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 24 EDIVERAKRKMVLDHLVIQRMDTTGRTVLNNAGAVLPRQ 140
E ++ A +K + L + +MD+ +TV +NAG+ P Q
Sbjct: 66 EQVILGASQKDTM--LAVSQMDSQDQTVKSNAGSASPNQ 102
>01_06_1446 -
37409074-37409783,37409896-37409986,37410645-37411988,
37412062-37412709,37412801-37412852,37413141-37413214,
37414370-37414419,37414488-37414569,37414779-37414828,
37414907-37414949,37415030-37415110,37415198-37415243,
37415336-37415382,37415467-37415532,37415612-37415678,
37415761-37415858
Length = 1182
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 32 SRESEKE-NGSRSPRHTADGYDGQNSVEQCGSRPATTANNPFNKEDLNA 175
SR S+K +GS+ + D S E+ S P+T++NN + E A
Sbjct: 289 SRSSQKSMSGSQCSSISGSDIDSIQSSERNTSGPSTSSNNTIDTEGAEA 337
>07_03_1567 - 27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 57 VLDHLVIQRMDTTGR 101
VLDHLVIQ+++ GR
Sbjct: 1003 VLDHLVIQKLNAEGR 1017
>06_01_0943 +
7258740-7258809,7258883-7259100,7260023-7260558,
7260915-7261698
Length = 535
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 147 LFAVVAGRLPHCSTLFCPSYPSAV*RGDREP 55
L+A++ R+P CSTLF P Y ++ +G P
Sbjct: 103 LWALLHTRMP-CSTLFFPLYLISIGQGGYNP 132
>06_01_0768 + 5742938-5743196,5743291-5744729
Length = 565
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 17 CGGRYSRESEKENGSRSP-RHTADGYDGQNSVE-QCGSRPATTA 142
C RYS ++N +RSP RH Q +++ +CG P T A
Sbjct: 107 CASRYSSAMYRKNTARSPCRHLVKRLREQEALQRRCG--PGTAA 148
>02_05_0280 +
27435166-27435254,27436348-27436437,27436764-27436866,
27437318-27437377,27437745-27439148,27439227-27439328,
27439424-27439609,27439695-27439820,27439905-27440000,
27440509-27440574
Length = 773
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 32 SRESEKENGSRSPRHTADGYDGQNSVEQCGSRPATTANNPFNKEDLNAILKFGA 193
S ES + S S +++ +G S E C S P N + +N + F +
Sbjct: 184 SVESLRSLASFSSKYSQSSSNGFTSYESCNSMNPHIVAMPVNSKSINTVRAFNS 237
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -3
Query: 209 FEQLFVRQTSKWRSNPPC*KDCSL---SWQDGS 120
FE + R TS W SNP + C + S +DGS
Sbjct: 2979 FENQWYRPTSGWGSNPASDQGCDVGPWSTKDGS 3011
>08_02_0139 + 13065468-13065902,13067196-13067279,13068221-13068499
Length = 265
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 98 QNSVEQCGSRPATTANNPFNKEDLNAILKFGARRVV 205
++ V+ G PA T PF E+L K A RV+
Sbjct: 229 RDKVDSIGRLPAPTKPLPFTPEELEFAAKREAARVI 264
>02_01_0282 +
1882844-1883413,1883519-1883644,1883733-1883930,
1884442-1884666,1884844-1885224,1885282-1885989,
1886546-1886839,1887211-1887709,1887949-1888721
Length = 1257
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 20 GGRYSRESEKENGSRSPRHTADGYDG 97
GGR ESE E G S R A+ DG
Sbjct: 141 GGRKEGESEAEGGDGSSRMEAEKDDG 166
>01_06_1483 + 37683559-37683922,37684916-37685193,37685865-37686167
Length = 314
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 86 GYDGQNSVEQCGSRPATTANNP 151
G +G S+ +CGS ATT +P
Sbjct: 15 GEEGTESIVRCGSPLATTTTSP 36
>01_06_0767 +
31823659-31823734,31823859-31823979,31824078-31824189,
31824278-31824691,31824795-31824898,31825017-31825136,
31825344-31825467,31826567-31826680,31826789-31826980,
31827328-31827424,31827505-31827653,31828729-31829013
Length = 635
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 38 ESEKENGSRSPRHTADGYDGQNSVEQCGSRPATTANNPFNKEDLN 172
ES E +++ H A Y +N GS A+++ FN ED++
Sbjct: 547 ESSSEP-NKAEEHKAAQYVDRNKFNTAGSNSASSSTWMFNVEDID 590
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 25.0 bits (52), Expect = 8.4
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = -3
Query: 116 IVQHCSARRIHPLYDE 69
+ HC+A+++H +YD+
Sbjct: 2813 LADHCNAKKVHLIYDK 2828
>03_01_0013 -
105281-105552,105762-105838,105839-106524,106655-106738,
106914-107114,107202-107309,107766-107855,108505-108551,
109096-109276,110010-110135,110220-110386,110877-111072
Length = 744
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 30 IVERAKRKMVLDHLVIQRMDTT---GRTVLNNA 119
I+ RA+RK+ L H VI D T G+ V N A
Sbjct: 402 IMRRAERKLKLSHSVIGEEDATYGKGKYVENEA 434
>02_03_0318 - 17664121-17664522
Length = 133
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 5 EG*ICGGRYSRESEKENGSRSPRHTADGYDGQNSVEQCGSRPATTA 142
EG G R R S R R A + QC SRP+T++
Sbjct: 53 EGSSSGDRRGRRSSAVEERREEREMAMCRHHRRPQSQCASRPSTSS 98
>01_07_0353 +
42962769-42962972,42963062-42963138,42963571-42963817,
42963907-42964476,42964998-42965171,42965514-42965640,
42965719-42965828,42966707-42966907,42966999-42967966,
42968110-42968358,42968760-42969105
Length = 1090
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 32 SRESEKENGSRSPRHTADGYDGQNSVEQCGSRPATTANNPFNKED 166
S S+ E+GS S YD ++ V+ R A +N N+ED
Sbjct: 704 SINSDAESGS-STYDGGSVYDSESEVDGSSDRNAADSNTKDNQED 747
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,364,679
Number of Sequences: 37544
Number of extensions: 114797
Number of successful extensions: 343
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 14,793,348
effective HSP length: 49
effective length of database: 12,953,692
effective search space used: 259073840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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