Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G18
(211 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase D... 65 4e-11
AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein. 65 4e-11
AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein. 65 4e-11
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 32 0.29
AL035406-11|CAI19894.1| 1195|Homo sapiens chromodomain helicase ... 32 0.29
AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase D... 32 0.29
AL035406-1|CAI19883.1| 808|Homo sapiens chromodomain helicase D... 32 0.29
AL031847-11|CAI19451.1| 1195|Homo sapiens chromodomain helicase ... 32 0.29
AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase ... 32 0.29
AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase D... 32 0.29
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 32 0.29
AB007913-1|BAA32289.1| 978|Homo sapiens KIAA0444 protein protein. 32 0.29
X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein. 31 0.67
BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein. 31 0.67
BC023144-1|AAH23144.1| 1052|Homo sapiens SWI/SNF related, matrix... 30 1.6
AC099396-1|AAY40920.1| 367|Homo sapiens unknown protein. 30 1.6
AB010882-1|BAA25173.1| 1052|Homo sapiens hSNF2H protein. 30 1.6
Z97832-1|CAI20187.1| 993|Homo sapiens protein ( Human DNA seque... 29 2.1
BC052263-1|AAH52263.2| 992|Homo sapiens signal peptide, CUB dom... 29 2.1
AY639608-1|AAU08347.1| 993|Homo sapiens signal peptide, CUB and... 29 2.1
AK092062-1|BAC03798.1| 880|Homo sapiens protein ( Homo sapiens ... 29 2.1
AK092010-1|BAC03789.1| 581|Homo sapiens protein ( Homo sapiens ... 29 2.1
AF452494-1|AAN76808.1| 993|Homo sapiens CUB and EGF containing ... 29 2.1
M89907-1|AAA80560.1| 769|Homo sapiens transcription activator p... 29 2.7
M88163-1|AAA80559.1| 976|Homo sapiens transcription activator p... 29 2.7
BC117447-1|AAI17448.1| 1054|Homo sapiens SWI/SNF related, matrix... 29 2.7
AL138745-3|CAI42614.1| 1005|Homo sapiens SWI/SNF related, matrix... 29 2.7
AL138745-2|CAI42612.1| 1042|Homo sapiens SWI/SNF related, matrix... 29 2.7
AL138745-1|CAI42613.1| 1054|Homo sapiens SWI/SNF related, matrix... 29 2.7
AL022577-3|CAI42684.1| 1005|Homo sapiens SWI/SNF related, matrix... 29 2.7
AL022577-2|CAI42682.1| 1042|Homo sapiens SWI/SNF related, matrix... 29 2.7
AL022577-1|CAI42683.1| 1054|Homo sapiens SWI/SNF related, matrix... 29 2.7
CR456730-1|CAG33011.1| 422|Homo sapiens NOL4 protein. 28 4.8
BT006763-1|AAP35409.1| 422|Homo sapiens nucleolar protein 4 pro... 28 4.8
BC000313-1|AAH00313.1| 422|Homo sapiens NOL4 protein protein. 28 4.8
AK123039-1|BAC85521.1| 971|Homo sapiens protein ( Homo sapiens ... 28 4.8
AJ400877-1|CAB92285.1| 999|Homo sapiens CEGP1 protein protein. 28 4.8
AB017800-1|BAA34576.1| 524|Homo sapiens nolp protein. 28 4.8
AB015339-1|BAA34797.1| 303|Homo sapiens HRIHFB2255 protein. 28 4.8
BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, al... 27 8.3
BC116180-1|AAI16181.1| 846|Homo sapiens COL24A1 protein protein. 27 8.3
BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, al... 27 8.3
AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV colla... 27 8.3
AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, al... 27 8.3
AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, al... 27 8.3
AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, al... 27 8.3
AF399514-1|AAK94999.1| 217|Homo sapiens olfactory receptor prot... 27 8.3
AF162669-1|AAG43387.1| 311|Homo sapiens olfactory receptor-like... 27 8.3
AF162668-1|AAG43386.1| 311|Homo sapiens olfactory receptor-like... 27 8.3
AB065725-1|BAC05946.1| 320|Homo sapiens seven transmembrane hel... 27 8.3
>BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase DNA
binding protein 1 protein.
Length = 1709
Score = 64.9 bits (151), Expect = 4e-11
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNNAGA 125
SVEEDI+ERAK+KMVLDHLVIQRMDTTG+TVL+ A
Sbjct: 917 SVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSA 953
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 104 SVEQCGSRPATTANNPFNKEDLNAILKFGARRV 202
+V GS P+++ PFNKE+L+AILKFGA +
Sbjct: 946 TVLHTGSAPSSST--PFNKEELSAILKFGAEEL 976
>AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein.
Length = 1739
Score = 64.9 bits (151), Expect = 4e-11
Identities = 30/37 (81%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQRMDTTGRTVL-NNAG 122
+VEE+I+ERAK+KMVLDHLVIQRMDTTGRT+L NN+G
Sbjct: 920 TVEEEIIERAKKKMVLDHLVIQRMDTTGRTILENNSG 956
Score = 34.3 bits (75), Expect = 0.072
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 143 NNPFNKEDLNAILKFGA 193
+NPFNKE+L AILKFGA
Sbjct: 960 SNPFNKEELTAILKFGA 976
>AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein.
Length = 1709
Score = 64.9 bits (151), Expect = 4e-11
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNNAGA 125
SVEEDI+ERAK+KMVLDHLVIQRMDTTG+TVL+ A
Sbjct: 917 SVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSA 953
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 104 SVEQCGSRPATTANNPFNKEDLNAILKFGARRV 202
+V GS P+++ PFNKE+L+AILKFGA +
Sbjct: 946 TVLHTGSAPSSST--PFNKEELSAILKFGAEEL 976
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase protein.
Length = 2000
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TRARSVEEDIVERAKRKMVLDHLVIQ 80
TRA SVEE I + AKRKM+L HLV++
Sbjct: 1186 TRA-SVEERITQVAKRKMMLTHLVVR 1210
>AL035406-11|CAI19894.1| 1195|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1195
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TRARSVEEDIVERAKRKMVLDHLVIQ 80
TRA SVEE I + AKRKM+L HLV++
Sbjct: 666 TRA-SVEERITQVAKRKMMLTHLVVR 690
>AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TRARSVEEDIVERAKRKMVLDHLVIQ 80
TRA SVEE I + AKRKM+L HLV++
Sbjct: 1150 TRA-SVEERITQVAKRKMMLTHLVVR 1174
>AL035406-1|CAI19883.1| 808|Homo sapiens chromodomain helicase
DNA binding protein 5 protein.
Length = 808
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TRARSVEEDIVERAKRKMVLDHLVIQ 80
TRA SVEE I + AKRKM+L HLV++
Sbjct: 7 TRA-SVEERITQVAKRKMMLTHLVVR 31
>AL031847-11|CAI19451.1| 1195|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1195
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TRARSVEEDIVERAKRKMVLDHLVIQ 80
TRA SVEE I + AKRKM+L HLV++
Sbjct: 666 TRA-SVEERITQVAKRKMMLTHLVVR 690
>AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TRARSVEEDIVERAKRKMVLDHLVIQ 80
TRA SVEE I + AKRKM+L HLV++
Sbjct: 1150 TRA-SVEERITQVAKRKMMLTHLVVR 1174
>AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TRARSVEEDIVERAKRKMVLDHLVIQ 80
TRA SVEE I + AKRKM+L HLV++
Sbjct: 1150 TRA-SVEERITQVAKRKMMLTHLVVR 1174
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TRARSVEEDIVERAKRKMVLDHLVIQ 80
TRA SVEE I + AKRKM+L HLV++
Sbjct: 1186 TRA-SVEERITQVAKRKMMLTHLVVR 1210
>AB007913-1|BAA32289.1| 978|Homo sapiens KIAA0444 protein protein.
Length = 978
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TRARSVEEDIVERAKRKMVLDHLVIQ 80
TRA SVEE I + AKRKM+L HLV++
Sbjct: 174 TRA-SVEERITQVAKRKMMLTHLVVR 198
>X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein.
Length = 1912
Score = 31.1 bits (67), Expect = 0.67
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TRARSVEEDIVERAKRKMVLDHLVIQ 80
TRA SVEE I + AK+KM+L HLV++
Sbjct: 1176 TRA-SVEERITQVAKKKMMLTHLVVR 1200
>BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein.
Length = 1937
Score = 31.1 bits (67), Expect = 0.67
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TRARSVEEDIVERAKRKMVLDHLVIQ 80
TRA SVEE I + AK+KM+L HLV++
Sbjct: 1173 TRA-SVEERITQVAKKKMMLTHLVVR 1197
>BC023144-1|AAH23144.1| 1052|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1052
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 612 TVEERIVERAEMKLRLDSIVIQQ 634
>AC099396-1|AAY40920.1| 367|Homo sapiens unknown protein.
Length = 367
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 345 TVEERIVERAEMKLRLDSIVIQQ 367
>AB010882-1|BAA25173.1| 1052|Homo sapiens hSNF2H protein.
Length = 1052
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 612 TVEERIVERAEMKLRLDSIVIQQ 634
>Z97832-1|CAI20187.1| 993|Homo sapiens protein ( Human DNA sequence
from clone RP3-329A5 on chromosome 6p21.1-21.33
Contains the gene for a novel EGF-like and CUB domain
protein ).
Length = 993
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 23 GRYSRESEKENGSRSPRHTADGYDGQNSVEQCGSR 127
G Y + + SR P +T+ +DG SV QC +R
Sbjct: 768 GSYQPDFRQNFCSRCPGNTSTDFDGSTSVAQCKNR 802
>BC052263-1|AAH52263.2| 992|Homo sapiens signal peptide, CUB
domain, EGF-like 3 protein.
Length = 992
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 23 GRYSRESEKENGSRSPRHTADGYDGQNSVEQCGSR 127
G Y + + SR P +T+ +DG SV QC +R
Sbjct: 767 GSYQPDFRQNFCSRCPGNTSTDFDGSTSVAQCKNR 801
>AY639608-1|AAU08347.1| 993|Homo sapiens signal peptide, CUB and
EGF-like domain containing protein 3 protein.
Length = 993
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 23 GRYSRESEKENGSRSPRHTADGYDGQNSVEQCGSR 127
G Y + + SR P +T+ +DG SV QC +R
Sbjct: 768 GSYQPDFRQNFCSRCPGNTSTDFDGSTSVAQCKNR 802
>AK092062-1|BAC03798.1| 880|Homo sapiens protein ( Homo sapiens
cDNA FLJ34743 fis, clone MESAN2009019, moderately
similar to CEGP1 protein. ).
Length = 880
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 23 GRYSRESEKENGSRSPRHTADGYDGQNSVEQCGSR 127
G Y + + SR P +T+ +DG SV QC +R
Sbjct: 655 GSYQPDFRQNFCSRCPGNTSTDFDGSTSVAQCKNR 689
>AK092010-1|BAC03789.1| 581|Homo sapiens protein ( Homo sapiens
cDNA FLJ34691 fis, clone MESAN2000909, moderately
similar to Homo sapiens CEGP1 protein (CEGP1), mRNA. ).
Length = 581
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 23 GRYSRESEKENGSRSPRHTADGYDGQNSVEQCGSR 127
G Y + + SR P +T+ +DG SV QC +R
Sbjct: 356 GSYQPDFRQNFCSRCPGNTSTDFDGSTSVAQCKNR 390
>AF452494-1|AAN76808.1| 993|Homo sapiens CUB and EGF containing
protein protein.
Length = 993
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 23 GRYSRESEKENGSRSPRHTADGYDGQNSVEQCGSR 127
G Y + + SR P +T+ +DG SV QC +R
Sbjct: 768 GSYQPDFRQNFCSRCPGNTSTDFDGSTSVAQCKNR 802
>M89907-1|AAA80560.1| 769|Homo sapiens transcription activator
protein.
Length = 769
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 627 TVEERIVERAEIKLRLDSIVIQQ 649
>M88163-1|AAA80559.1| 976|Homo sapiens transcription activator
protein.
Length = 976
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 549 TVEERIVERAEIKLRLDSIVIQQ 571
>BC117447-1|AAI17448.1| 1054|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1054
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 627 TVEERIVERAEIKLRLDSIVIQQ 649
>AL138745-3|CAI42614.1| 1005|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1005
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 606 TVEERIVERAEIKLRLDSIVIQQ 628
>AL138745-2|CAI42612.1| 1042|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1042
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 615 TVEERIVERAEIKLRLDSIVIQQ 637
>AL138745-1|CAI42613.1| 1054|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1054
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 627 TVEERIVERAEIKLRLDSIVIQQ 649
>AL022577-3|CAI42684.1| 1005|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1005
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 606 TVEERIVERAEIKLRLDSIVIQQ 628
>AL022577-2|CAI42682.1| 1042|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1042
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 615 TVEERIVERAEIKLRLDSIVIQQ 637
>AL022577-1|CAI42683.1| 1054|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1054
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQR 83
+VEE IVERA+ K+ LD +VIQ+
Sbjct: 627 TVEERIVERAEIKLRLDSIVIQQ 649
>CR456730-1|CAG33011.1| 422|Homo sapiens NOL4 protein.
Length = 422
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 RYSRESEKENGSRSPRHTADGYD-GQNSVEQCGSRPATTANNPFNKED 166
+ RE+ +ENGS+SP H+ YD G+N G+ + +++D
Sbjct: 227 KMEREA-RENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDD 273
>BT006763-1|AAP35409.1| 422|Homo sapiens nucleolar protein 4
protein.
Length = 422
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 RYSRESEKENGSRSPRHTADGYD-GQNSVEQCGSRPATTANNPFNKED 166
+ RE+ +ENGS+SP H+ YD G+N G+ + +++D
Sbjct: 227 KMEREA-RENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDD 273
>BC000313-1|AAH00313.1| 422|Homo sapiens NOL4 protein protein.
Length = 422
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 RYSRESEKENGSRSPRHTADGYD-GQNSVEQCGSRPATTANNPFNKED 166
+ RE+ +ENGS+SP H+ YD G+N G+ + +++D
Sbjct: 227 KMEREA-RENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDD 273
>AK123039-1|BAC85521.1| 971|Homo sapiens protein ( Homo sapiens
cDNA FLJ41044 fis, clone NT2RP7000466, highly similar
to Mus musculus CUB domain and EGF-like repeat
containing 1 (Cegf1). ).
Length = 971
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 23 GRYSRESEKENGSRSPRHTADGYDGQNSVEQCGSR 127
G Y E K N P +T +DG ++ QC +R
Sbjct: 745 GTYQPEFGKNNCVSCPGNTTTDFDGSTNITQCKNR 779
>AJ400877-1|CAB92285.1| 999|Homo sapiens CEGP1 protein protein.
Length = 999
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 23 GRYSRESEKENGSRSPRHTADGYDGQNSVEQCGSR 127
G Y E K N P +T +DG ++ QC +R
Sbjct: 773 GTYQPEFGKNNCVSCPGNTTTDFDGSTNITQCKNR 807
>AB017800-1|BAA34576.1| 524|Homo sapiens nolp protein.
Length = 524
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 RYSRESEKENGSRSPRHTADGYD-GQNSVEQCGSRPATTANNPFNKED 166
+ RE+ +ENGS+SP H+ YD G+N G+ + +++D
Sbjct: 227 KMEREA-RENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDD 273
>AB015339-1|BAA34797.1| 303|Homo sapiens HRIHFB2255 protein.
Length = 303
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 RYSRESEKENGSRSPRHTADGYD-GQNSVEQCGSRPATTANNPFNKED 166
+ RE+ +ENGS+SP H+ YD G+N G+ + +++D
Sbjct: 6 KMEREA-RENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDD 52
>BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 187 KLQNGVQILLVKRIVRCRGRTAPALFN 107
+LQ GVQ+L K +V RG+ PA+FN
Sbjct: 130 RLQLGVQLLPKKLVVHIRGK-QPAVFN 155
>BC116180-1|AAI16181.1| 846|Homo sapiens COL24A1 protein protein.
Length = 846
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 187 KLQNGVQILLVKRIVRCRGRTAPALFN 107
+LQ GVQ+L K +V RG+ PA+FN
Sbjct: 130 RLQLGVQLLPKKLVVHIRGK-QPAVFN 155
>BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 187 KLQNGVQILLVKRIVRCRGRTAPALFN 107
+LQ GVQ+L K +V RG+ PA+FN
Sbjct: 130 RLQLGVQLLPKKLVVHIRGK-QPAVFN 155
>AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV collagen
precursor protein.
Length = 1714
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 187 KLQNGVQILLVKRIVRCRGRTAPALFN 107
+LQ GVQ+L K +V RG+ PA+FN
Sbjct: 130 RLQLGVQLLPKKLVVHIRGK-QPAVFN 155
>AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 187 KLQNGVQILLVKRIVRCRGRTAPALFN 107
+LQ GVQ+L K +V RG+ PA+FN
Sbjct: 130 RLQLGVQLLPKKLVVHIRGK-QPAVFN 155
>AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 187 KLQNGVQILLVKRIVRCRGRTAPALFN 107
+LQ GVQ+L K +V RG+ PA+FN
Sbjct: 130 RLQLGVQLLPKKLVVHIRGK-QPAVFN 155
>AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 187 KLQNGVQILLVKRIVRCRGRTAPALFN 107
+LQ GVQ+L K +V RG+ PA+FN
Sbjct: 130 RLQLGVQLLPKKLVVHIRGK-QPAVFN 155
>AF399514-1|AAK94999.1| 217|Homo sapiens olfactory receptor
protein.
Length = 217
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 172 VQILLVKRIVRCRGRTAPALFNTVLPVVSIRCMTR*SRTIFLFAL-STISSSTDLAL 5
V L R+ CR R + F + P+++I C + LFA+ I ++T LA+
Sbjct: 91 VHTTLTFRLSFCRSRKINSFFCDIPPLLAISCSDTSLNELLLFAICGFIQTATVLAI 147
>AF162669-1|AAG43387.1| 311|Homo sapiens olfactory receptor-like
protein JCG2 protein.
Length = 311
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 139 CRGRTAPALFNTVLPVVSIRCMTR*SRTIFLFALSTISS-STDLALV 2
CR T F +LP++++ C + I LF + +++ +T LA++
Sbjct: 169 CRSHTVSHYFCDILPLLTLSCSSTHINEILLFIIGGVNTLATTLAVL 215
>AF162668-1|AAG43386.1| 311|Homo sapiens olfactory receptor-like
protein JCG2 protein.
Length = 311
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 139 CRGRTAPALFNTVLPVVSIRCMTR*SRTIFLFALSTISS-STDLALV 2
CR T F +LP++++ C + I LF + +++ +T LA++
Sbjct: 169 CRSHTVSHYFCDILPLLTLSCSSTHINEILLFIIGGVNTLATTLAVL 215
>AB065725-1|BAC05946.1| 320|Homo sapiens seven transmembrane helix
receptor protein.
Length = 320
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 172 VQILLVKRIVRCRGRTAPALFNTVLPVVSIRCMTR*SRTIFLFAL-STISSSTDLAL 5
V L R+ CR R + F + P+++I C + LFA+ I ++T LA+
Sbjct: 162 VHTTLTFRLSFCRSRKINSFFCDIPPLLAISCSDTSLNELLLFAICGFIQTATVLAI 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,317,072
Number of Sequences: 237096
Number of extensions: 583306
Number of successful extensions: 5591
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 5507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5591
length of database: 76,859,062
effective HSP length: 48
effective length of database: 65,478,454
effective search space used: 1375047534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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