Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G18
(211 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h... 69 7e-13
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro... 69 7e-13
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro... 69 7e-13
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ... 69 7e-13
AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protei... 31 0.29
AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB... 31 0.29
AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA... 31 0.29
AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein. 29 0.67
AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA... 29 0.67
L27127-1|AAA19868.1| 1027|Drosophila melanogaster ISWI protein p... 29 0.89
AY094908-1|AAM11261.1| 1027|Drosophila melanogaster RH13158p pro... 29 0.89
AE013599-1548|AAM68638.1| 1027|Drosophila melanogaster CG8625-PC... 29 0.89
AE013599-1547|AAM68637.1| 1027|Drosophila melanogaster CG8625-PB... 29 0.89
AE013599-1546|AAF58479.1| 1027|Drosophila melanogaster CG8625-PA... 29 0.89
X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein. 26 6.3
L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protei... 26 6.3
BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p pro... 26 6.3
BT001872-1|AAN71644.1| 935|Drosophila melanogaster SD07661p pro... 26 6.3
AY089252-1|AAL89990.1| 109|Drosophila melanogaster AT03788p pro... 26 6.3
AE014297-881|AAO41523.1| 935|Drosophila melanogaster CG9755-PE,... 26 6.3
AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,... 26 6.3
AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,... 26 6.3
AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,... 26 6.3
AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,... 26 6.3
D89663-1|BAA20906.1| 832|Drosophila melanogaster myosin light c... 26 8.3
BT030408-1|ABO52828.1| 732|Drosophila melanogaster IP04158p pro... 26 8.3
BT010026-1|AAQ22495.1| 1439|Drosophila melanogaster RE05911p pro... 26 8.3
AY128477-1|AAM75070.1| 939|Drosophila melanogaster RE39339p pro... 26 8.3
AY113646-1|AAM29651.1| 576|Drosophila melanogaster RH74685p pro... 26 8.3
AY061461-1|AAL29009.1| 1430|Drosophila melanogaster LD41803p pro... 26 8.3
AF255667-1|AAG01794.1| 536|Drosophila melanogaster Stretchin-ML... 26 8.3
AE014298-628|AAF45943.3| 939|Drosophila melanogaster CG3626-PA ... 26 8.3
AE014297-3624|AAF56334.1| 1439|Drosophila melanogaster CG6879-PA... 26 8.3
AE014297-3525|AAF56280.2| 1430|Drosophila melanogaster CG5728-PA... 26 8.3
AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-P... 26 8.3
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P... 26 8.3
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P... 26 8.3
>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
chromodomain-helicase-DNA-bindingprotein protein.
Length = 1883
Score = 69.3 bits (162), Expect = 7e-13
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 9 ARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNNAG 122
ARSVEE IVERAK+KMVLDHLVIQRMDTTGRTVL+ +G
Sbjct: 963 ARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSG 1000
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 95 GQNSVEQCGSRPATTANNPFNKEDLNAILKFGARRV 202
G+ +++ G+ ++ +N PFNK+DL+AILKFGA +
Sbjct: 992 GRTVLDKSGNGHSSNSN-PFNKDDLSAILKFGAEEL 1026
>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p protein.
Length = 1645
Score = 69.3 bits (162), Expect = 7e-13
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 9 ARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNNAG 122
ARSVEE IVERAK+KMVLDHLVIQRMDTTGRTVL+ +G
Sbjct: 963 ARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSG 1000
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 95 GQNSVEQCGSRPATTANNPFNKEDLNAILKFGARRV 202
G+ +++ G+ ++ +N PFNK+DL+AILKFGA +
Sbjct: 992 GRTVLDKSGNGHSSNSN-PFNKDDLSAILKFGAEEL 1026
>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p
protein.
Length = 1101
Score = 69.3 bits (162), Expect = 7e-13
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 9 ARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNNAG 122
ARSVEE IVERAK+KMVLDHLVIQRMDTTGRTVL+ +G
Sbjct: 431 ARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSG 468
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 95 GQNSVEQCGSRPATTANNPFNKEDLNAILKFGARRV 202
G+ +++ G+ ++ +N PFNK+DL+AILKFGA +
Sbjct: 460 GRTVLDKSGNGHSSNSN-PFNKDDLSAILKFGAEEL 494
>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
protein.
Length = 1883
Score = 69.3 bits (162), Expect = 7e-13
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 9 ARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNNAG 122
ARSVEE IVERAK+KMVLDHLVIQRMDTTGRTVL+ +G
Sbjct: 963 ARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSG 1000
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 95 GQNSVEQCGSRPATTANNPFNKEDLNAILKFGARRV 202
G+ +++ G+ ++ +N PFNK+DL+AILKFGA +
Sbjct: 992 GRTVLDKSGNGHSSNSN-PFNKDDLSAILKFGAEEL 1026
>AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protein
protein.
Length = 1982
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
SVEE + + AKRKM+L HLV++
Sbjct: 1181 SVEERVTQVAKRKMMLTHLVVR 1202
>AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB,
isoform B protein.
Length = 1983
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
SVEE + + AKRKM+L HLV++
Sbjct: 1182 SVEERVTQVAKRKMMLTHLVVR 1203
>AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA,
isoform A protein.
Length = 1982
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
SVEE + + AKRKM+L HLV++
Sbjct: 1181 SVEERVTQVAKRKMMLTHLVVR 1202
>AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.
Length = 1518
Score = 29.5 bits (63), Expect = 0.67
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
SVEE I++ AK KM+L HLV++
Sbjct: 718 SVEERIMQVAKHKMMLTHLVVR 739
>AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA
protein.
Length = 892
Score = 29.5 bits (63), Expect = 0.67
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
SVEE I++ AK KM+L HLV++
Sbjct: 715 SVEERIMQVAKHKMMLTHLVVR 736
>L27127-1|AAA19868.1| 1027|Drosophila melanogaster ISWI protein
protein.
Length = 1027
Score = 29.1 bits (62), Expect = 0.89
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
+VEE IVERA+ K+ LD +VIQ
Sbjct: 560 TVEEKIVERAEVKLRLDKMVIQ 581
>AY094908-1|AAM11261.1| 1027|Drosophila melanogaster RH13158p
protein.
Length = 1027
Score = 29.1 bits (62), Expect = 0.89
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
+VEE IVERA+ K+ LD +VIQ
Sbjct: 560 TVEEKIVERAEVKLRLDKMVIQ 581
>AE013599-1548|AAM68638.1| 1027|Drosophila melanogaster CG8625-PC,
isoform C protein.
Length = 1027
Score = 29.1 bits (62), Expect = 0.89
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
+VEE IVERA+ K+ LD +VIQ
Sbjct: 560 TVEEKIVERAEVKLRLDKMVIQ 581
>AE013599-1547|AAM68637.1| 1027|Drosophila melanogaster CG8625-PB,
isoform B protein.
Length = 1027
Score = 29.1 bits (62), Expect = 0.89
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
+VEE IVERA+ K+ LD +VIQ
Sbjct: 560 TVEEKIVERAEVKLRLDKMVIQ 581
>AE013599-1546|AAF58479.1| 1027|Drosophila melanogaster CG8625-PA,
isoform A protein.
Length = 1027
Score = 29.1 bits (62), Expect = 0.89
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 15 SVEEDIVERAKRKMVLDHLVIQ 80
+VEE IVERA+ K+ LD +VIQ
Sbjct: 560 TVEEKIVERAEVKLRLDKMVIQ 581
>X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein.
Length = 1533
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 119 RIVQHCSARRIHPLYDEVIEN 57
RI++HC+A + P+ DE+ E+
Sbjct: 1275 RILEHCTAEQTTPILDELHEH 1295
>L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protein
protein.
Length = 1533
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 119 RIVQHCSARRIHPLYDEVIEN 57
RI++HC+A + P+ DE+ E+
Sbjct: 1275 RILEHCTAEQTTPILDELHEH 1295
>BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p protein.
Length = 1533
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 119 RIVQHCSARRIHPLYDEVIEN 57
RI++HC+A + P+ DE+ E+
Sbjct: 1275 RILEHCTAEQTTPILDELHEH 1295
>BT001872-1|AAN71644.1| 935|Drosophila melanogaster SD07661p
protein.
Length = 935
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 119 RIVQHCSARRIHPLYDEVIEN 57
RI++HC+A + P+ DE+ E+
Sbjct: 677 RILEHCTAEQTTPILDELHEH 697
>AY089252-1|AAL89990.1| 109|Drosophila melanogaster AT03788p
protein.
Length = 109
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 7 GLDLWRKI*SRERKGKWFSITSSYSGWIRRAEQC*TMREPSCH 135
G WR+ + K +W T + G +R QC SCH
Sbjct: 23 GHTFWRRSGAPAGKNRWAIPTPAPGGSLRHGLQCNRWSHLSCH 65
>AE014297-881|AAO41523.1| 935|Drosophila melanogaster CG9755-PE,
isoform E protein.
Length = 935
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 119 RIVQHCSARRIHPLYDEVIEN 57
RI++HC+A + P+ DE+ E+
Sbjct: 677 RILEHCTAEQTTPILDELHEH 697
>AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,
isoform B protein.
Length = 1185
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 119 RIVQHCSARRIHPLYDEVIEN 57
RI++HC+A + P+ DE+ E+
Sbjct: 927 RILEHCTAEQTTPILDELHEH 947
>AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,
isoform D protein.
Length = 1533
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 119 RIVQHCSARRIHPLYDEVIEN 57
RI++HC+A + P+ DE+ E+
Sbjct: 1275 RILEHCTAEQTTPILDELHEH 1295
>AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,
isoform C protein.
Length = 1533
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 119 RIVQHCSARRIHPLYDEVIEN 57
RI++HC+A + P+ DE+ E+
Sbjct: 1275 RILEHCTAEQTTPILDELHEH 1295
>AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,
isoform A protein.
Length = 1533
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 119 RIVQHCSARRIHPLYDEVIEN 57
RI++HC+A + P+ DE+ E+
Sbjct: 1275 RILEHCTAEQTTPILDELHEH 1295
>D89663-1|BAA20906.1| 832|Drosophila melanogaster myosin light
chain kinase isoform-II protein.
Length = 832
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 211 SLNNSSCAKLQNGVQILLVKRIVRCRGRTAPALFNTVLPVV 89
SL NS C+ + ++ +++R +R + L T LPVV
Sbjct: 8 SLINSGCSDCSSSGELCVLERDLRGQDEECVQLLKTPLPVV 48
>BT030408-1|ABO52828.1| 732|Drosophila melanogaster IP04158p
protein.
Length = 732
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 182 SKWRSNPPC*KDCSLSWQDGSRIVQHCSARRIHPLYDEV 66
S WR PC LSW D + +V SA+RI Y V
Sbjct: 588 SAWRV--PCGLSPILSWDDFANVVGPESAKRIGHAYRSV 624
>BT010026-1|AAQ22495.1| 1439|Drosophila melanogaster RE05911p
protein.
Length = 1439
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 182 SKWRSNPPC*KDCSLSWQDGSRIVQHCSARRIHPLYDEV 66
S WR PC LSW D + +V SA+RI Y V
Sbjct: 412 SAWRV--PCGLSPILSWDDFANVVGPESAKRIGHAYRSV 448
>AY128477-1|AAM75070.1| 939|Drosophila melanogaster RE39339p
protein.
Length = 939
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 125 GSRIVQHCSARRIHPLYDEV 66
G RIV+HC+ ++IH + +V
Sbjct: 229 GVRIVEHCAIKKIHSEHGKV 248
>AY113646-1|AAM29651.1| 576|Drosophila melanogaster RH74685p
protein.
Length = 576
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 211 SLNNSSCAKLQNGVQILLVKRIVRCRGRTAPALFNTVLPVV 89
SL NS C+ + ++ +++R +R + L T LPVV
Sbjct: 486 SLINSGCSDCSSSGELCVLERDLRGQDEECVQLLKTPLPVV 526
>AY061461-1|AAL29009.1| 1430|Drosophila melanogaster LD41803p
protein.
Length = 1430
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 GRYSRESEKENGSRSPRHTAD--GYDGQNSVEQCGSRPATTANNPFNKEDLNA 175
G Y ++ R +H GYD S+ C P F ED+NA
Sbjct: 394 GNYDKDEVLSKYGRKTKHKVRILGYDVIESLYYCSDDPNVVNEKLFCLEDINA 446
>AF255667-1|AAG01794.1| 536|Drosophila melanogaster Stretchin-MLCK
protein.
Length = 536
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 211 SLNNSSCAKLQNGVQILLVKRIVRCRGRTAPALFNTVLPVV 89
SL NS C+ + ++ +++R +R + L T LPVV
Sbjct: 418 SLINSGCSDCSSSGELCVLERDLRGQDEECVQLLKTPLPVV 458
>AE014298-628|AAF45943.3| 939|Drosophila melanogaster CG3626-PA
protein.
Length = 939
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 125 GSRIVQHCSARRIHPLYDEV 66
G RIV+HC+ ++IH + +V
Sbjct: 229 GVRIVEHCAIKKIHSEHGKV 248
>AE014297-3624|AAF56334.1| 1439|Drosophila melanogaster CG6879-PA
protein.
Length = 1439
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 182 SKWRSNPPC*KDCSLSWQDGSRIVQHCSARRIHPLYDEV 66
S WR PC LSW D + +V SA+RI Y V
Sbjct: 412 SAWRV--PCGLSPILSWDDFANVVGPESAKRIGHAYRSV 448
>AE014297-3525|AAF56280.2| 1430|Drosophila melanogaster CG5728-PA
protein.
Length = 1430
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 GRYSRESEKENGSRSPRHTAD--GYDGQNSVEQCGSRPATTANNPFNKEDLNA 175
G Y ++ R +H GYD S+ C P F ED+NA
Sbjct: 394 GNYDKDEVLSKYGRKTKHKVRILGYDVIESLYYCSDDPNVVNEKLFCLEDINA 446
>AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-PF,
isoform F protein.
Length = 1506
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 211 SLNNSSCAKLQNGVQILLVKRIVRCRGRTAPALFNTVLPVV 89
SL NS C+ + ++ +++R +R + L T LPVV
Sbjct: 501 SLINSGCSDCSSSGELCVLERDLRGQDEECVQLLKTPLPVV 541
>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
isoform C protein.
Length = 4463
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 211 SLNNSSCAKLQNGVQILLVKRIVRCRGRTAPALFNTVLPVV 89
SL NS C+ + ++ +++R +R + L T LPVV
Sbjct: 3458 SLINSGCSDCSSSGELCVLERDLRGQDEECVQLLKTPLPVV 3498
>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
isoform A protein.
Length = 9270
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 211 SLNNSSCAKLQNGVQILLVKRIVRCRGRTAPALFNTVLPVV 89
SL NS C+ + ++ +++R +R + L T LPVV
Sbjct: 8265 SLINSGCSDCSSSGELCVLERDLRGQDEECVQLLKTPLPVV 8305
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,211,841
Number of Sequences: 53049
Number of extensions: 183224
Number of successful extensions: 604
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 24,988,368
effective HSP length: 49
effective length of database: 22,388,967
effective search space used: 447779340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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