Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G13
(477 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 103 3e-22
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 103 4e-22
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 103 4e-22
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 103 4e-22
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 103 4e-22
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 103 4e-22
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 103 4e-22
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 103 4e-22
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 103 4e-22
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 103 4e-22
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 98 2e-20
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 92 1e-18
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 89 7e-18
AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein. 31 1.6
AB096971-1|BAD23806.1| 137|Homo sapiens uromodulin-like 1 prote... 31 2.7
BC043193-1|AAH43193.1| 527|Homo sapiens chromosome 4 open readi... 29 8.3
AY358785-1|AAQ89145.1| 519|Homo sapiens TCPD2512 protein. 29 8.3
AK172805-1|BAD18776.1| 331|Homo sapiens protein ( Homo sapiens ... 29 8.3
AB096968-1|BAD23803.1| 77|Homo sapiens uromodulin-like 1 prote... 29 8.3
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 103 bits (247), Expect = 3e-22
Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Frame = +3
Query: 111 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTR 278
RN L GV R+S+S MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 279 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 161
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 103 bits (246), Expect = 4e-22
Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Frame = +3
Query: 111 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTR 278
RN L G+ R+S+S MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 279 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 161
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 103 bits (246), Expect = 4e-22
Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Frame = +3
Query: 111 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTR 278
RN L G+ R+S+S MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 279 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 161
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 103 bits (246), Expect = 4e-22
Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Frame = +3
Query: 111 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTR 278
RN L G+ R+S+S MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 279 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 161
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 103 bits (246), Expect = 4e-22
Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Frame = +3
Query: 111 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTR 278
RN L G+ R+S+S MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 279 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 161
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 103 bits (246), Expect = 4e-22
Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Frame = +3
Query: 111 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTR 278
RN L G+ R+S+S MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 279 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 161
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 103 bits (246), Expect = 4e-22
Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Frame = +3
Query: 111 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTR 278
RN L G+ R+S+S MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 279 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 161
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 103 bits (246), Expect = 4e-22
Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Frame = +3
Query: 111 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTR 278
RN L G+ R+S+S MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 279 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 161
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 103 bits (246), Expect = 4e-22
Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Frame = +3
Query: 111 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTR 278
RN L G+ R+S+S MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 279 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 161
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 103 bits (246), Expect = 4e-22
Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Frame = +3
Query: 111 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTR 278
RN L G+ R+S+S MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 279 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 161
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 97.9 bits (233), Expect = 2e-20
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 6/115 (5%)
Frame = +3
Query: 111 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTR 278
RN L G+ R+S+S MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 279 TVLLKSRKSFYPTQDKIRG-RSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 437
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GR GK
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRRRGK 160
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 91.9 bits (218), Expect = 1e-18
Identities = 48/100 (48%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Frame = +3
Query: 159 MYHKKAIYK--FVGKKNPFAEKPKKPTV--VVKQIGGEKNGGTRTVLLKSRKSFYPTQDK 326
MY +KA+YK + K+ +K K+ + V K +GG+KNGGTR V L+ +YPT+D
Sbjct: 1 MYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDV 60
Query: 327 IRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 61 PRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 100
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 89.0 bits (211), Expect = 7e-18
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +3
Query: 135 VLRFSKSRMYHKKAIYKFVGKKNPFAEKPKKPTVVVKQIGGEKNGGTRTVLLKSRKSFYP 314
+ S+ MY +K Y K +K K V K +GG+KNGGTR V L+ +YP
Sbjct: 60 ICHVSRKAMYKRK--YSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 315 TQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR 440
T+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 161
>AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein.
Length = 758
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 463 GNTPTSTTRLPACLPANRMHTVPGVRLGLVLRTCLLKLL 347
G TP+ T+ N+ TV VR G+ L CL+K L
Sbjct: 411 GGTPSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKAL 449
>AB096971-1|BAD23806.1| 137|Homo sapiens uromodulin-like 1 protein
variant 7 protein.
Length = 137
Score = 30.7 bits (66), Expect = 2.7
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 337 VLMARVSVNMCVGRDLTSLPGQCAFCWRADTLASVSCSLE 456
V+ ++S+++ + + +L G CA WRA T ASV+ L+
Sbjct: 92 VISVQMSMSVSMRSSMPALEGNCAQTWRARTGASVTRKLQ 131
>BC043193-1|AAH43193.1| 527|Homo sapiens chromosome 4 open reading
frame 18 protein.
Length = 527
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 178 YISLSVRRTRLLKSPRNQPSWLSK*AVKRMEALVQSC*KAGNHSTPLRTRSGVVLM 345
++ S R + + + PSWLSK ++RM L S AG P+ +RSG L+
Sbjct: 195 FLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSA-VAG--LRPVSSRSGARLL 247
>AY358785-1|AAQ89145.1| 519|Homo sapiens TCPD2512 protein.
Length = 519
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 178 YISLSVRRTRLLKSPRNQPSWLSK*AVKRMEALVQSC*KAGNHSTPLRTRSGVVLM 345
++ S R + + + PSWLSK ++RM L S AG P+ +RSG L+
Sbjct: 195 FLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSA-VAG--LRPVSSRSGARLL 247
>AK172805-1|BAD18776.1| 331|Homo sapiens protein ( Homo sapiens
cDNA FLJ23966 fis, clone HEP16465. ).
Length = 331
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 178 YISLSVRRTRLLKSPRNQPSWLSK*AVKRMEALVQSC*KAGNHSTPLRTRSGVVLM 345
++ S R + + + PSWLSK ++RM L S AG P+ +RSG L+
Sbjct: 195 FLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSA-VAG--LRPVSSRSGARLL 247
>AB096968-1|BAD23803.1| 77|Homo sapiens uromodulin-like 1 protein
variant 4 protein.
Length = 77
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 337 VLMARVSVNMCVGRDLTSLPGQCAFCWRADTLASVSCSLE 456
+L + +S+++ + + +L G CA WRA T ASV+ L+
Sbjct: 32 LLHSLMSMSVSMRSSMPALEGNCAQTWRARTGASVTRKLQ 71
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,709,617
Number of Sequences: 237096
Number of extensions: 1715075
Number of successful extensions: 7893
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7868
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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