Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G13
(477 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 24 0.96
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 1.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 1.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 1.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 3.9
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 6.8
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 6.8
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 6.8
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.0
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 21 9.0
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 23.8 bits (49), Expect = 0.96
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 104 QTEEL*PRKRCTPFLQKQDVPQEGYI 181
+T L PRKRC L+ ++ + G I
Sbjct: 460 ETLILPPRKRCKMILESMEIERNGLI 485
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/44 (22%), Positives = 19/44 (43%)
Frame = -3
Query: 262 FSPPICLTTTVGFLGFSANGFFLPTNLYIAFLWYILLLEKRSTP 131
+S C V +G+ ++P+ L + W L + +TP
Sbjct: 207 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 250
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/44 (22%), Positives = 19/44 (43%)
Frame = -3
Query: 262 FSPPICLTTTVGFLGFSANGFFLPTNLYIAFLWYILLLEKRSTP 131
+S C V +G+ ++P+ L + W L + +TP
Sbjct: 207 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 250
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/44 (22%), Positives = 19/44 (43%)
Frame = -3
Query: 262 FSPPICLTTTVGFLGFSANGFFLPTNLYIAFLWYILLLEKRSTP 131
+S C V +G+ ++P+ L + W L + +TP
Sbjct: 146 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 189
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 3.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 225 KPTVVVKQIGGEKNGGTRTVLLK 293
+P V +KQ G GG T L+K
Sbjct: 658 EPAVHIKQEGQSPEGGKLTRLIK 680
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.0 bits (42), Expect = 6.8
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -2
Query: 473 QTTRQHSNEHDTLASVSARQQNAH 402
++ Q++N+H+ A S++ N H
Sbjct: 437 KSDNQNNNQHNDQAHHSSKSNNRH 460
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -3
Query: 223 LGFSANGFFLPTNLYIAFLWYILLLEKRSTPFPR 122
+GF +++P+ L + W L ++P PR
Sbjct: 231 MGFFMMDYYIPSILIVVISWVSFWLHMDASP-PR 263
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 392 SRDSVHSVGGQTRWQAC 442
S+ SVH GQT Q C
Sbjct: 366 SQTSVHYSNGQTHSQLC 382
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 20.6 bits (41), Expect = 9.0
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -2
Query: 257 TAYLLNHDGWFLGLFSKRVL 198
+ Y+LN+DG + ++S++ L
Sbjct: 340 SGYILNNDGKWHNIYSEKGL 359
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 20.6 bits (41), Expect = 9.0
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -2
Query: 257 TAYLLNHDGWFLGLFSKRVL 198
+ Y+LN+DG + ++S++ L
Sbjct: 340 SGYILNNDGKWHNIYSEKGL 359
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 20.6 bits (41), Expect = 9.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 258 EKNGGTRTVLLKSRKSFYPTQDKIR 332
EKNG T + K F P + K+R
Sbjct: 167 EKNGETYLRIKKHAVKFNPAKVKLR 191
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,055
Number of Sequences: 438
Number of extensions: 3331
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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