Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G12
(306 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094853-1|AAM11206.1| 347|Drosophila melanogaster RE13621p pro... 132 6e-32
AE014296-2711|AAF49481.1| 347|Drosophila melanogaster CG4933-PA... 132 6e-32
AY113491-1|AAM29496.1| 694|Drosophila melanogaster RE48269p pro... 30 0.49
AE014134-1779|AAF52873.2| 694|Drosophila melanogaster CG4901-PA... 30 0.49
BT028805-1|ABI34186.1| 475|Drosophila melanogaster RE65147p pro... 30 0.64
AY071507-1|AAL49129.1| 493|Drosophila melanogaster RE56074p pro... 30 0.64
AE014134-960|AAN10553.1| 493|Drosophila melanogaster CG11149-PB... 30 0.64
AE014134-959|AAF52281.1| 493|Drosophila melanogaster CG11149-PA... 30 0.64
AY051602-1|AAK93026.1| 509|Drosophila melanogaster GH24257p pro... 27 3.4
AE014134-898|AAF52232.1| 509|Drosophila melanogaster CG14032-PA... 27 3.4
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 27 6.0
BT001555-1|AAN71310.1| 828|Drosophila melanogaster RE12363p pro... 27 6.0
AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p pro... 27 6.0
AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-P... 27 6.0
AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-P... 27 6.0
AE014134-2006|AAF53045.1| 827|Drosophila melanogaster CG16833-P... 27 6.0
AE014134-2005|AAN10771.1| 1070|Drosophila melanogaster CG16833-P... 27 6.0
AE014134-2004|AAN10770.1| 1070|Drosophila melanogaster CG16833-P... 27 6.0
M37495-1|AAB59246.1| 533|Drosophila melanogaster segmentation p... 26 7.9
AJ277178-1|CAB85473.1| 138|Drosophila melanogaster mod(mdg4)54.... 26 7.9
AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box bin... 26 7.9
AF070063-1|AAC72897.1| 805|Drosophila melanogaster cap 'n' coll... 26 7.9
AE014297-2984|AAF55885.2| 498|Drosophila melanogaster CG32491-P... 26 7.9
>AY094853-1|AAM11206.1| 347|Drosophila melanogaster RE13621p
protein.
Length = 347
Score = 132 bits (320), Expect = 6e-32
Identities = 58/93 (62%), Positives = 76/93 (81%)
Frame = +1
Query: 28 MVVAIGFEGSANKLGIGIVRDGEILANCRRTYITPPGLGFLPRETAEHHQRNIHDLLKQA 207
MV A+G EGSANK+GIGI+RDG++LAN RRTYITPPG GFLP+ETA+HH+ I L++ +
Sbjct: 1 MVCALGIEGSANKIGIGIIRDGKVLANVRRTYITPPGEGFLPKETAKHHREAILGLVESS 60
Query: 208 FEDSGLTPKDIDVVCYTKGPGMSAPLMVCTIVA 306
+++ L D+DV+CYTKGPGM+ PL+V IVA
Sbjct: 61 LKEAQLKSSDLDVICYTKGPGMAPPLLVGAIVA 93
>AE014296-2711|AAF49481.1| 347|Drosophila melanogaster CG4933-PA
protein.
Length = 347
Score = 132 bits (320), Expect = 6e-32
Identities = 58/93 (62%), Positives = 76/93 (81%)
Frame = +1
Query: 28 MVVAIGFEGSANKLGIGIVRDGEILANCRRTYITPPGLGFLPRETAEHHQRNIHDLLKQA 207
MV A+G EGSANK+GIGI+RDG++LAN RRTYITPPG GFLP+ETA+HH+ I L++ +
Sbjct: 1 MVCALGIEGSANKIGIGIIRDGKVLANVRRTYITPPGEGFLPKETAKHHREAILGLVESS 60
Query: 208 FEDSGLTPKDIDVVCYTKGPGMSAPLMVCTIVA 306
+++ L D+DV+CYTKGPGM+ PL+V IVA
Sbjct: 61 LKEAQLKSSDLDVICYTKGPGMAPPLLVGAIVA 93
>AY113491-1|AAM29496.1| 694|Drosophila melanogaster RE48269p
protein.
Length = 694
Score = 30.3 bits (65), Expect = 0.49
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 106 NCRRTYITPPGLGFLPRETAEHHQRNIHDLLKQAFEDSGLTPKDIDVVCYTKG 264
NC+ Y+ T E H+ IH +L F TPK+ DV+ + G
Sbjct: 238 NCKGMYLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTG 290
>AE014134-1779|AAF52873.2| 694|Drosophila melanogaster CG4901-PA
protein.
Length = 694
Score = 30.3 bits (65), Expect = 0.49
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 106 NCRRTYITPPGLGFLPRETAEHHQRNIHDLLKQAFEDSGLTPKDIDVVCYTKG 264
NC+ Y+ T E H+ IH +L F TPK+ DV+ + G
Sbjct: 238 NCKGMYLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTG 290
>BT028805-1|ABI34186.1| 475|Drosophila melanogaster RE65147p
protein.
Length = 475
Score = 29.9 bits (64), Expect = 0.64
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -3
Query: 238 YPLGLIRSLQKLVSTNHEYFSGDVQLFPEV 149
YP+ + R++ +L + H F+ D++L+P V
Sbjct: 249 YPINVGRNIARLATNTHFIFACDIELYPSV 278
>AY071507-1|AAL49129.1| 493|Drosophila melanogaster RE56074p
protein.
Length = 493
Score = 29.9 bits (64), Expect = 0.64
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -3
Query: 238 YPLGLIRSLQKLVSTNHEYFSGDVQLFPEV 149
YP+ + R++ +L + H F+ D++L+P V
Sbjct: 249 YPINVGRNIARLATNTHFIFACDIELYPSV 278
>AE014134-960|AAN10553.1| 493|Drosophila melanogaster CG11149-PB,
isoform B protein.
Length = 493
Score = 29.9 bits (64), Expect = 0.64
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -3
Query: 238 YPLGLIRSLQKLVSTNHEYFSGDVQLFPEV 149
YP+ + R++ +L + H F+ D++L+P V
Sbjct: 249 YPINVGRNIARLATNTHFIFACDIELYPSV 278
>AE014134-959|AAF52281.1| 493|Drosophila melanogaster CG11149-PA,
isoform A protein.
Length = 493
Score = 29.9 bits (64), Expect = 0.64
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -3
Query: 238 YPLGLIRSLQKLVSTNHEYFSGDVQLFPEV 149
YP+ + R++ +L + H F+ D++L+P V
Sbjct: 249 YPINVGRNIARLATNTHFIFACDIELYPSV 278
>AY051602-1|AAK93026.1| 509|Drosophila melanogaster GH24257p
protein.
Length = 509
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 297 STNHERCTHARTFSVAHHINILWG*SGVFKSLFQQIMNI 181
ST+H+ + + + A H N+L G+FK ++ +N+
Sbjct: 134 STDHKWHSRRKALTPAFHFNVLQSFLGIFKEECKKFLNV 172
>AE014134-898|AAF52232.1| 509|Drosophila melanogaster CG14032-PA
protein.
Length = 509
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 297 STNHERCTHARTFSVAHHINILWG*SGVFKSLFQQIMNI 181
ST+H+ + + + A H N+L G+FK ++ +N+
Sbjct: 134 STDHKWHSRRKALTPAFHFNVLQSFLGIFKEECKKFLNV 172
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 43 GFEGSANKLGIGIVRDG-----EILANCRRTYITPPGLGFLPRETA 165
G + +++ G+G+V G +LAN R Y+TP R+ A
Sbjct: 1099 GLKAASSGSGVGVVTSGGVVSSAVLANAPRVYLTPSSTFMTNRQMA 1144
>BT001555-1|AAN71310.1| 828|Drosophila melanogaster RE12363p
protein.
Length = 828
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 115 RTYITPPGLGFLPRETAEHHQRNIHDLLK 201
RTYI P LG L R ++ QRN ++K
Sbjct: 412 RTYIIPNDLGALRRHWPKYAQRNTKWIIK 440
>AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p
protein.
Length = 632
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 43 GFEGSANKLGIGIVRDG-----EILANCRRTYITPPGLGFLPRETA 165
G + +++ G+G+V G +LAN R Y+TP R+ A
Sbjct: 16 GLKAASSGSGVGVVTSGGVVSSAVLANAPRVYLTPSSTFMTNRQMA 61
>AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-PD,
isoform D protein.
Length = 632
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 43 GFEGSANKLGIGIVRDG-----EILANCRRTYITPPGLGFLPRETA 165
G + +++ G+G+V G +LAN R Y+TP R+ A
Sbjct: 16 GLKAASSGSGVGVVTSGGVVSSAVLANAPRVYLTPSSTFMTNRQMA 61
>AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-PA,
isoform A protein.
Length = 632
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 43 GFEGSANKLGIGIVRDG-----EILANCRRTYITPPGLGFLPRETA 165
G + +++ G+G+V G +LAN R Y+TP R+ A
Sbjct: 16 GLKAASSGSGVGVVTSGGVVSSAVLANAPRVYLTPSSTFMTNRQMA 61
>AE014134-2006|AAF53045.1| 827|Drosophila melanogaster CG16833-PA,
isoform A protein.
Length = 827
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 115 RTYITPPGLGFLPRETAEHHQRNIHDLLK 201
RTYI P LG L R ++ QRN ++K
Sbjct: 412 RTYIIPNDLGALRRHWPKYAQRNTKWIIK 440
>AE014134-2005|AAN10771.1| 1070|Drosophila melanogaster CG16833-PC,
isoform C protein.
Length = 1070
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 115 RTYITPPGLGFLPRETAEHHQRNIHDLLK 201
RTYI P LG L R ++ QRN ++K
Sbjct: 655 RTYIIPNDLGALRRHWPKYAQRNTKWIIK 683
>AE014134-2004|AAN10770.1| 1070|Drosophila melanogaster CG16833-PB,
isoform B protein.
Length = 1070
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 115 RTYITPPGLGFLPRETAEHHQRNIHDLLK 201
RTYI P LG L R ++ QRN ++K
Sbjct: 655 RTYIIPNDLGALRRHWPKYAQRNTKWIIK 683
>M37495-1|AAB59246.1| 533|Drosophila melanogaster segmentation
protein protein.
Length = 533
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 85 RDGEILANCRRTYITPPGLGFLPRETAEH 171
R + L TY P G G LPR A H
Sbjct: 240 RTSQDLVQLNHTYSLPQGSGSLPRPQARH 268
>AJ277178-1|CAB85473.1| 138|Drosophila melanogaster mod(mdg4)54.6
protein.
Length = 138
Score = 26.2 bits (55), Expect = 7.9
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 72 YWHCKRWRNTCKLQENIH 125
YW C +WR C+ + H
Sbjct: 103 YWKCSKWRKQCRSRVITH 120
>AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box
binding protein-relatedfactor 2 protein.
Length = 632
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 43 GFEGSANKLGIGIVRDG-----EILANCRRTYITPPGLGFLPRETA 165
G + +++ G+G+V G +LAN R Y+TP R+ A
Sbjct: 16 GLKAASSGSGVGVVTPGGVVSSAVLANAPRVYLTPSSTFMTNRQMA 61
>AF070063-1|AAC72897.1| 805|Drosophila melanogaster cap 'n' collar
isoform B protein.
Length = 805
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 85 RDGEILANCRRTYITPPGLGFLPRETAEH 171
R + L TY P G G LPR A H
Sbjct: 512 RTSQDLVQLNHTYSLPQGSGSLPRPQARH 540
>AE014297-2984|AAF55885.2| 498|Drosophila melanogaster CG32491-PB,
isoform B protein.
Length = 498
Score = 26.2 bits (55), Expect = 7.9
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 72 YWHCKRWRNTCKLQENIH 125
YW C +WR C+ + H
Sbjct: 463 YWKCSKWRKQCRSRVITH 480
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,528,674
Number of Sequences: 53049
Number of extensions: 317167
Number of successful extensions: 835
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -