Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G09
(394 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D78130-1|BAA22372.1| 574|Homo sapiens squalene epoxidase protein. 29 4.1
BC017033-1|AAH17033.1| 574|Homo sapiens squalene epoxidase prot... 29 4.1
AY062319-1|AAL65747.1| 111|Homo sapiens immunoglobulin heavy ch... 29 4.1
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 29 4.1
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 29 4.1
AF211930-1|AAF37619.1| 108|Homo sapiens immunoglobulin heavy ch... 29 4.1
AF098865-1|AAD10823.1| 574|Homo sapiens squalene epoxidase prot... 29 4.1
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 29 4.1
BC103846-1|AAI03847.1| 127|Homo sapiens keratin associated prot... 28 9.5
BC103845-1|AAI03846.1| 127|Homo sapiens keratin associated prot... 28 9.5
AJ406942-1|CAC27581.1| 127|Homo sapiens keratin associated prot... 28 9.5
>D78130-1|BAA22372.1| 574|Homo sapiens squalene epoxidase protein.
Length = 574
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 322 CVLQFQSLIFELALRCRSQHGGRCQLGNDAAGNDVAV 212
CVL F SL L+ RCR ++GG LG +G+ A+
Sbjct: 31 CVLVFLSLGLVLSYRCRHRNGG--LLGRQRSGSQFAL 65
>BC017033-1|AAH17033.1| 574|Homo sapiens squalene epoxidase
protein.
Length = 574
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 322 CVLQFQSLIFELALRCRSQHGGRCQLGNDAAGNDVAV 212
CVL F SL L+ RCR ++GG LG +G+ A+
Sbjct: 31 CVLVFLSLGLVLSYRCRHRNGG--LLGRQQSGSQFAL 65
>AY062319-1|AAL65747.1| 111|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 111
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -1
Query: 193 SCAASRYTCTTEAKHW---ANDRRQ*AAGTINHSTPDHVYSK 77
SC AS YT TT A HW A +R G IN D YS+
Sbjct: 13 SCKASGYTFTTYAMHWVRQAPGQRLEWMGWINPGNGDIKYSQ 54
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains
6 protein.
Length = 1229
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = +1
Query: 190 SCCCPGILRQRRCRQRHFPTDI---CRHVG 270
SC CP R RC ++ P D+ CRH G
Sbjct: 869 SCLCPAGRRGPRCAEKCLPRDVRAGCRHSG 898
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains
6 protein.
Length = 1229
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = +1
Query: 190 SCCCPGILRQRRCRQRHFPTDI---CRHVG 270
SC CP R RC ++ P D+ CRH G
Sbjct: 869 SCLCPAGRRGPRCAEKCLPRDVRAGCRHSG 898
>AF211930-1|AAF37619.1| 108|Homo sapiens immunoglobulin heavy chain
variable region 194-4 protein.
Length = 108
Score = 29.5 bits (63), Expect = 4.1
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -1
Query: 205 LGSNSCAASRYTCTTEAKHW---ANDRRQ*AAGTINHSTPDHVYSKCSKETHRALSATS 38
L SC AS YT T+ A HW A +R G IN D YS+ ++ S TS
Sbjct: 1 LSEVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGDTKYSQKFQDRVTITSDTS 59
>AF098865-1|AAD10823.1| 574|Homo sapiens squalene epoxidase
protein.
Length = 574
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 322 CVLQFQSLIFELALRCRSQHGGRCQLGNDAAGNDVAV 212
CVL F SL L+ RCR ++GG LG +G+ A+
Sbjct: 31 CVLVFLSLGLVLSYRCRHRNGG--LLGRQQSGSQFAL 65
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = +1
Query: 190 SCCCPGILRQRRCRQRHFPTDI---CRHVG 270
SC CP R RC ++ P D+ CRH G
Sbjct: 886 SCLCPAGRRGPRCAEKCLPRDVRAGCRHSG 915
>BC103846-1|AAI03847.1| 127|Homo sapiens keratin associated protein
4-10 protein.
Length = 127
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 166 CRYSGWQHSCCCPGILRQRRCRQRHFPTDICR 261
CR S Q +CCCP + CR T C+
Sbjct: 25 CRPSCCQTTCCCPSCVVSSCCRPSCSQTTCCQ 56
>BC103845-1|AAI03846.1| 127|Homo sapiens keratin associated protein
4-10 protein.
Length = 127
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 166 CRYSGWQHSCCCPGILRQRRCRQRHFPTDICR 261
CR S Q +CCCP + CR T C+
Sbjct: 25 CRPSCCQTTCCCPSCVVSSCCRPSCSQTTCCQ 56
>AJ406942-1|CAC27581.1| 127|Homo sapiens keratin associated protein
4.10 protein.
Length = 127
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 166 CRYSGWQHSCCCPGILRQRRCRQRHFPTDICR 261
CR S Q +CCCP + CR T C+
Sbjct: 25 CRPSCCQTTCCCPSCVVSSCCRPSCSQTTCCQ 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,135,951
Number of Sequences: 237096
Number of extensions: 1039884
Number of successful extensions: 6397
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6397
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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