Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G08
(240 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 0.52
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 0.52
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 1.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.1
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 2.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 2.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 2.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 2.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 2.8
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 20 3.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 20 3.7
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 20 3.7
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 20 4.9
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 19 8.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 19 8.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 19 8.5
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 23.0 bits (47), Expect = 0.52
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +2
Query: 95 WVEYIQLAAEYKPAVNLGQGFPDYHAPEHVTKALADIAVGDNPLLNQ 235
W E + A+ +P+ ++ Q +P+ P KA+ + V + +Q
Sbjct: 22 WEEIRRQASVEQPSFSVHQVYPENLIPRLAKKAIQVLGVTEKEFFDQ 68
Score = 20.2 bits (40), Expect = 3.7
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +3
Query: 18 EISVQLVPCLINSDYRNGMDPV 83
E+ Q++P + RNG +P+
Sbjct: 393 ELLYQMIPKQVADRLRNGENPI 414
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 0.52
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 87 FSPGPYRFGSPNLSDMVP 34
F P P+ G+PN+ ++P
Sbjct: 1169 FMPSPFMAGAPNVPTILP 1186
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.4 bits (43), Expect = 1.6
Identities = 6/18 (33%), Positives = 14/18 (77%)
Frame = -1
Query: 72 YRFGSPNLSDMVPIELRF 19
+R + N ++++PI++RF
Sbjct: 16 WRVNNSNYTELLPIDMRF 33
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 155 NLVRDSPLVCIQLLIGYTLPTHS 87
NL+ L+ L+G+TLP S
Sbjct: 200 NLIVPCVLISSMALLGFTLPPDS 222
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 155 NLVRDSPLVCIQLLIGYTLPTHS 87
NL+ L+ L+G+TLP S
Sbjct: 200 NLIVPCVLISSMALLGFTLPPDS 222
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 155 NLVRDSPLVCIQLLIGYTLPTHS 87
NL+ L+ L+G+TLP S
Sbjct: 200 NLIVPCVLISSMALLGFTLPPDS 222
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 155 NLVRDSPLVCIQLLIGYTLPTHS 87
NL+ L+ L+G+TLP S
Sbjct: 200 NLIVPCVLISSMALLGFTLPPDS 222
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 155 NLVRDSPLVCIQLLIGYTLPTHS 87
NL+ L+ L+G+TLP S
Sbjct: 200 NLIVPCVLISSMALLGFTLPPDS 222
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 155 NLVRDSPLVCIQLLIGYTLPTHS 87
NL+ L+ L+G+TLP S
Sbjct: 200 NLIVPCVLISSMALLGFTLPPDS 222
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 2.1
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -2
Query: 107 YTLPTHSFHRVHTVSVVRIYQTWYQLN 27
Y+LP + + +++ R+ Q + QLN
Sbjct: 483 YSLPMVNHSKSSRINIERMKQVYQQLN 509
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 2.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 155 NLVRDSPLVCIQLLIGYTLPTHS 87
NL+ L+ L+G+TLP S
Sbjct: 268 NLIVPCVLISSMALLGFTLPPDS 290
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 2.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 155 NLVRDSPLVCIQLLIGYTLPTHS 87
NL+ L+ L+G+TLP S
Sbjct: 268 NLIVPCVLISSMALLGFTLPPDS 290
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.6 bits (41), Expect = 2.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 34 WYHV**IRTTETVWTR 81
W++ IRT E +W R
Sbjct: 424 WFNSLDIRTEELIWAR 439
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.6 bits (41), Expect = 2.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 34 WYHV**IRTTETVWTR 81
W++ IRT E +W R
Sbjct: 514 WFNSLDIRTEELIWAR 529
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.2 bits (40), Expect = 3.7
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 124 IQTSGESRTRFSGLPCSGTCH 186
++T G+ SGLP CH
Sbjct: 462 VETVGDKYMAVSGLPEPCRCH 482
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 20.2 bits (40), Expect = 3.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 155 NLVRDSPLVCIQLLIGYTLPTHS 87
NL+ L+ ++G+TLP S
Sbjct: 237 NLIVPCVLIASMAVLGFTLPPDS 259
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.2 bits (40), Expect = 3.7
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 124 IQTSGESRTRFSGLPCSGTCH 186
++T G+ SGLP CH
Sbjct: 462 VETVGDKYMAVSGLPEPCRCH 482
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 19.8 bits (39), Expect = 4.9
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 81 PGPYRFGSPNLSDMVPIELR 22
P PYR P +S + E+R
Sbjct: 491 PPPYRLNKPLMSLITSSEVR 510
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.0 bits (37), Expect = 8.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 134 LVCIQLLIGY 105
L+C+ LLIG+
Sbjct: 282 LICMMLLIGH 291
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.0 bits (37), Expect = 8.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 134 LVCIQLLIGY 105
L+C+ LLIG+
Sbjct: 250 LICMMLLIGH 259
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 19.0 bits (37), Expect = 8.5
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 29 SIGTMSDKFGLPKRYGPGEKSVW 97
S+ ++ + G K+Y GE+ W
Sbjct: 585 SVCSLPCEVGQAKKYVAGEQCCW 607
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,627
Number of Sequences: 438
Number of extensions: 1638
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4024224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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