Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_G06
(280 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22178-6|CAA80158.2| 265|Caenorhabditis elegans Hypothetical pr... 27 2.0
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 26 3.5
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 26 3.5
U97008-1|AAB52310.1| 370|Caenorhabditis elegans Hypothetical pr... 26 4.6
U88175-4|AAB42279.1| 440|Caenorhabditis elegans Hypothetical pr... 26 4.6
Z49913-5|CAA90146.1| 404|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical pr... 25 8.0
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 25 8.0
Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical pr... 25 8.0
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 25 8.0
Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical pr... 25 8.0
Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical pr... 25 8.0
U88176-4|ABB51191.1| 427|Caenorhabditis elegans Hypothetical pr... 25 8.0
AL021171-5|CAE17871.1| 688|Caenorhabditis elegans Hypothetical ... 25 8.0
AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuo... 25 8.0
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 25 8.0
AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuo... 25 8.0
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 25 8.0
AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuro... 25 8.0
AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuo... 25 8.0
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 25 8.0
>Z22178-6|CAA80158.2| 265|Caenorhabditis elegans Hypothetical
protein F54C8.6 protein.
Length = 265
Score = 27.1 bits (57), Expect = 2.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 43 SSCLTAETSDNFIVTIYNSLAWKVKKFI 126
S C T + +NF++ Y SL K ++F+
Sbjct: 52 SDCTTCKKIENFVMPYYESLKAKYQQFV 79
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
assigned gene nameprotein 213 protein.
Length = 1437
Score = 26.2 bits (55), Expect = 3.5
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +1
Query: 28 CHFNESSCLT-----AETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSN 192
CH + S+ L+ +T DNFI + +SL + ++ ++ DP L S
Sbjct: 553 CHIHPSTVLSYLLSQVQTFDNFIGPVVDSLRYLTSLEFDVLTYCIISQLADPSKQALKST 612
Query: 193 LAEIPDFLKHIPT 231
A I +L+ + T
Sbjct: 613 DATISPWLQALGT 625
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 26.2 bits (55), Expect = 3.5
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +1
Query: 37 NESSCLTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAE 201
NE+ C S F V I+NS I IP + + D N L S + E
Sbjct: 465 NETICKPINGSSEFSVVIFNSNGRYFNGTIRIPYSQKTAVLRDAHKNVLESQIVE 519
>U97008-1|AAB52310.1| 370|Caenorhabditis elegans Hypothetical
protein C03G6.10 protein.
Length = 370
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 151 YEVYDPKGNKLPSNLAEIPDF-LKHIPTRK 237
+E ++PK N LPS+L + + L H PT+K
Sbjct: 157 HESFEPK-NSLPSSLKAVQNNKLNHCPTKK 185
>U88175-4|AAB42279.1| 440|Caenorhabditis elegans Hypothetical
protein F21F3.2 protein.
Length = 440
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 256 IYVWQQISS*EYV*ENQVFLLDLKVIYYLSGH 161
+Y WQ S +Y+ E++V DLK + L H
Sbjct: 123 LYTWQIFSGLKYLEEHKVVHRDLKPVNILVDH 154
>Z49913-5|CAA90146.1| 404|Caenorhabditis elegans Hypothetical
protein ZK938.7 protein.
Length = 404
Score = 25.4 bits (53), Expect = 6.1
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 4 IRHEDYDRCHFNESSCLTAETSDNFIVTIYNSLAWKVKKF--IEIPVVKADY 153
+RHE +D H N + ++S +FI I N + + + F +EI + KA Y
Sbjct: 202 MRHEFFDEIHINLQTETEYQSSLDFI-DIRNCVLYLICTFPSLEITLDKASY 252
>Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical
protein ZK637.8f protein.
Length = 889
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 283 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 339
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical
protein ZK637.8e protein.
Length = 888
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 288 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 344
>Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical
protein ZK637.8d protein.
Length = 899
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 299 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 355
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical
protein ZK637.8c protein.
Length = 894
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 288 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 344
>Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical
protein ZK637.8b protein.
Length = 883
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 283 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 339
>Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical
protein ZK637.8a protein.
Length = 905
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 299 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 355
>U88176-4|ABB51191.1| 427|Caenorhabditis elegans Hypothetical
protein F18F11.3 protein.
Length = 427
Score = 25.0 bits (52), Expect = 8.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 155 KSMTRKVINYLQI*QKYLIFSNIFL 229
K + +VIN++ + K LIF NIFL
Sbjct: 69 KVIHTQVINWMPLKFKILIFDNIFL 93
>AL021171-5|CAE17871.1| 688|Caenorhabditis elegans Hypothetical
protein H04D03.4 protein.
Length = 688
Score = 25.0 bits (52), Expect = 8.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 143 KLITKSMTRKVINYLQI*QKYLIFSN-IFLRGNL 241
KL K+ T+K++ +L I K F N IFL NL
Sbjct: 116 KLFNKT-TKKILRHLDIGNKRYFFDNRIFLSDNL 148
>AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuolar
proton pump 101kDa subunit variant protein.
Length = 889
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 283 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 339
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 288 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 344
>AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuolar
proton pump 103kDa subunit variant protein.
Length = 899
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 299 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 355
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 288 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 344
>AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuronal
vacuolar protonpump 100 kDa subunit variant protein.
Length = 883
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 283 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 339
>AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuolar
proton pump 103kDa subunit variant protein.
Length = 905
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 TRIMTGVTLMNPVV*QRKRVIISLSRYITAWLGK*RN-SLRYQSSKLITKSMTRKVI 178
TRI T++ R RV+++ S+ + WL K R Y + L +T+K +
Sbjct: 299 TRIEDLKTVLGQTQDHRHRVLVAASKNVRMWLTKVRKIKSIYHTLNLFNIDVTQKCL 355
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 25.0 bits (52), Expect = 8.0
Identities = 14/68 (20%), Positives = 32/68 (47%)
Frame = +1
Query: 34 FNESSCLTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDF 213
FN+ C +A + IY+ K K+ +E V+ ++ +G ++ +++
Sbjct: 333 FNQGQCCSAGSRTFVEGKIYDEFVAKAKELVEKTVIGDPFDENTTQGPQIDE--SQVETI 390
Query: 214 LKHIPTRK 237
+K+I + K
Sbjct: 391 MKYIESGK 398
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,055,703
Number of Sequences: 27780
Number of extensions: 108981
Number of successful extensions: 273
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 248937694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -