Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_G06
         (280 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   0.23 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   0.23 
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   0.53 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   2.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   2.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   2.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   4.9  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    20   6.5  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 0.23
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 261 ILYMCGNRFPRRNMFEKIRYF 199
           I+Y  G  FP+RN F  + Y+
Sbjct: 301 IMYSNGVTFPQRNRFSSLPYY 321


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 0.23
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 261 ILYMCGNRFPRRNMFEKIRYF 199
           I+Y  G  FP+RN F  + Y+
Sbjct: 301 IMYSNGVTFPQRNRFSSLPYY 321


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.4 bits (48), Expect = 0.53
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 115 KKFIEIPVVKADYEVYDPKGNKLPSNLAEIPDFLK 219
           KK  EI     +   Y P G+KLP N+  IPD ++
Sbjct: 49  KKLTEIINETHENVKYLP-GHKLPPNIIAIPDVVE 82


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 145 ADYEVYDPKGNKLP 186
           ADY  + P G+K+P
Sbjct: 280 ADYRYFCPDGSKVP 293


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 145 ADYEVYDPKGNKLP 186
           ADY  + P G+K+P
Sbjct: 280 ADYRYFCPDGSKVP 293


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 145 ADYEVYDPKGNKLP 186
           ADY  + P G+K+P
Sbjct: 280 ADYRYFCPDGSKVP 293


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 70  HSFPLLDNWI 41
           H  PLL NWI
Sbjct: 501 HWMPLLPNWI 510


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -2

Query: 177 ITFRVIDFVISFDDW 133
           +T +++  ++ FDDW
Sbjct: 71  VTMQLLPKLMEFDDW 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,850
Number of Sequences: 438
Number of extensions: 1450
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5369883
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)