Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_G02
         (166 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D29806-1|BAA06189.1| 1230|Drosophila melanogaster PLC-gamma D pr...    27   3.5  
BT023880-1|ABA81814.1| 1236|Drosophila melanogaster RE62235p pro...    27   3.5  
AE014298-2375|AAF48595.3| 1236|Drosophila melanogaster CG4200-PA...    27   3.5  

>D29806-1|BAA06189.1| 1230|Drosophila melanogaster PLC-gamma D
           protein.
          Length = 1230

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 43  FGDGTV*LA*SQ*LIQNYIFCMWRRVRLRHSMIR 144
           FGDGT  +  S   + +Y    WRR R  H  I+
Sbjct: 605 FGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIK 638


>BT023880-1|ABA81814.1| 1236|Drosophila melanogaster RE62235p
           protein.
          Length = 1236

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 43  FGDGTV*LA*SQ*LIQNYIFCMWRRVRLRHSMIR 144
           FGDGT  +  S   + +Y    WRR R  H  I+
Sbjct: 611 FGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIK 644


>AE014298-2375|AAF48595.3| 1236|Drosophila melanogaster CG4200-PA
           protein.
          Length = 1236

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 43  FGDGTV*LA*SQ*LIQNYIFCMWRRVRLRHSMIR 144
           FGDGT  +  S   + +Y    WRR R  H  I+
Sbjct: 611 FGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIK 644


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,119,731
Number of Sequences: 53049
Number of extensions: 76561
Number of successful extensions: 103
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 24,988,368
effective HSP length: 35
effective length of database: 23,131,653
effective search space used: 439501407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)