Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_F24
         (394 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   0.47 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.4  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   3.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   3.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   4.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   4.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   5.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   5.8  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   5.8  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 0.47
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 237 IIYRSFFGKTTNIYSKMSCRSVFHRMSIQSKFVCHYTKII 118
           II +S+FG TTN+        V  ++  QS F C +  ++
Sbjct: 55  IIPKSYFGTTTNL---KRFYKVVEKILTQSSFECIHLSVL 91


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 303 KTEQFGCNNSIYWPVLYKTFIHIIYRSFFGKTTNIYSKM 187
           KT    C   +Y+  L  + I+I+ RSF  +  ++  K+
Sbjct: 169 KTFLNSCLMDVYYEFLLISLINILIRSFKSRYKDLNQKL 207


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 237 IIYRSFFGKTTNI 199
           II +S+FG TTN+
Sbjct: 55  IIPKSYFGTTTNL 67


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 268 IDGVVTTKLFGFVQFRNETSAQQAISKANGS 360
           I G VTT L  F+QF   ++++      N S
Sbjct: 370 IVGAVTTYLVIFIQFDQSSNSRNNYVLTNNS 400


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 291 FGCNNSIYWPVLYKTF 244
           F C NS   PV+Y  F
Sbjct: 319 FACTNSCMNPVVYGVF 334


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 291 FGCNNSIYWPVLYKTF 244
           F C NS   PV+Y  F
Sbjct: 319 FACTNSCMNPVVYGVF 334


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 190 DELSICLSSHVYP 152
           DEL + LS+H +P
Sbjct: 339 DELIVTLSAHYFP 351


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 190 DELSICLSSHVYP 152
           DEL + LS+H +P
Sbjct: 265 DELIVTLSTHYFP 277


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/19 (47%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = -2

Query: 228 RSFFGKTTNIYSKMS-CRS 175
           +SFFG+T N  S +S C++
Sbjct: 26  KSFFGRTYNNISSISECKN 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,158
Number of Sequences: 336
Number of extensions: 1983
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)