Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_F24
         (394 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    23   5.3  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    22   9.2  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    22   9.2  

>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 226 TVDDVYERFIEYGPI 270
           T +D  ERF+E GP+
Sbjct: 138 TCNDANERFLECGPV 152


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -2

Query: 393 SFNINVFPLKDTPVCFTDGLLSTCFISKLNKTEQFG--CNNSIYWPVLYKTFIH-IIYRS 223
           S  I+V  +    VC+T   +       LN TE+FG    + I++  +  + I+ +IY +
Sbjct: 414 SLRISVVIVVAFVVCWTPYYIMMLIFMFLNPTERFGEDLQSGIFFFGMSNSLINPLIYGA 473

Query: 222 F 220
           F
Sbjct: 474 F 474


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -2

Query: 393 SFNINVFPLKDTPVCFTDGLLSTCFISKLNKTEQFG--CNNSIYWPVLYKTFIH-IIYRS 223
           S  I+V  +    VC+T   +       LN TE+FG    + I++  +  + I+ +IY +
Sbjct: 415 SLRISVVIVVAFVVCWTPYYIMMLIFMFLNPTERFGEDLQSGIFFFGMSNSLINPLIYGA 474

Query: 222 F 220
           F
Sbjct: 475 F 475


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 399,139
Number of Sequences: 2352
Number of extensions: 8055
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)