Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_F23
(441 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765... 81 3e-16
02_02_0186 + 7594197-7594281,7594409-7594513,7595062-7595238,759... 33 0.10
08_01_0239 - 1993833-1994114,1994266-1994436,1994541-1994686,199... 33 0.13
08_01_0503 + 4364678-4364976,4365320-4365595,4366091-4366586 30 0.95
01_06_1313 - 36212524-36213669 29 1.7
11_04_0275 + 15685501-15685663,15685869-15685994,15687015-15687166 29 2.2
08_02_0820 - 21542640-21543129,21543244-21543510,21543720-21544015 29 2.2
04_04_1465 + 33794225-33794389,33794471-33794597,33794669-337947... 29 2.2
12_01_0254 + 1885412-1885683,1886123-1886389,1886501-1887077 28 2.9
07_03_0786 + 21510477-21511451,21512272-21512499 28 2.9
07_03_0781 - 21477797-21478549 28 2.9
07_03_0779 - 21464249-21464257,21465400-21466374 28 2.9
03_02_0842 + 11682332-11683802,11683858-11683940,11684751-116865... 28 2.9
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 28 3.8
05_06_0264 + 26756337-26756411,26756494-26756594,26757196-267573... 27 5.1
04_04_0482 - 25547393-25547455,25547767-25547866,25548154-255482... 27 5.1
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 27 5.1
01_06_0759 + 31754616-31754647,31754862-31755077,31755186-317553... 27 5.1
11_01_0256 + 1969292-1969563,1970004-1970270,1970413-1970989 27 6.7
07_03_1540 - 27570605-27571375,27571474-27572748,27572769-275729... 27 6.7
03_06_0777 + 36181095-36181311,36181444-36181530,36181785-361827... 27 6.7
02_05_1168 + 34651143-34651424,34651983-34652138,34652239-346523... 27 6.7
07_03_0784 + 21505204-21505950 27 8.8
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 27 8.8
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 27 8.8
>03_02_0774 + 11074508-11074880,11076270-11076370,11076453-11076509,
11076596-11076690,11077480-11077579,11078272-11078330,
11078874-11079001,11079362-11079440,11079708-11079795,
11080490-11080590,11080822-11080900,11081740-11081850,
11082655-11082750,11082885-11083007,11085750-11085947,
11086071-11086172,11086570-11086634,11086888-11087008,
11088540-11088697,11088823-11088973,11089414-11089521,
11089939-11090031,11090285-11090321,11090659-11090906,
11091396-11091542,11091929-11092099,11092166-11092175,
11093360-11093505
Length = 1114
Score = 81.4 bits (192), Expect = 3e-16
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Frame = +3
Query: 12 FAFGDVDDIGVDAKLQHPLGVAYCDSNRTLYLADTYNHKIKKVDIGPQKVTSLNPT---- 179
+ FGD D G D LQHPLGV Y N+ +Y+AD+YNHKIK++D +KVT++ T
Sbjct: 794 YLFGDHDGTGSDVLLQHPLGVVYASDNQ-IYVADSYNHKIKRLDPVTRKVTTIAGTGRAG 852
Query: 180 -MIETADPAEFNEPSGLSASSDGKYLYIADTNNHTVKILNL 299
A A+ +EP+GL DG+ L +ADTNN T++ + L
Sbjct: 853 YKDGPALSAQLSEPAGLVEVGDGR-LLVADTNNSTIRYIVL 892
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = +3
Query: 24 DVDDIGVDAKLQHPLGVAYCDSNRTLYLADTYNHKIKKVDIGPQKVTSLNPT----MIET 191
D D + + L+ P +A N L+++D+ +++I ++ + + + + + T
Sbjct: 561 DKDSRLLASPLKFPGKLAIDVLNNRLFISDSNHNRIVVTNLEGEFICQIGSSEEGLLDGT 620
Query: 192 ADPAEFNEPSGLSASSDGKYLYIADTNNHTVKIL 293
D A FN P GL+ +S LY+ADT NH ++ L
Sbjct: 621 FDTASFNRPQGLAYNSKKNILYVADTENHALRTL 654
>02_02_0186 +
7594197-7594281,7594409-7594513,7595062-7595238,
7595716-7595886,7596198-7596289,7596302-7596407,
7597516-7597601,7597861-7598501,7599065-7599107
Length = 501
Score = 33.1 bits (72), Expect = 0.10
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +3
Query: 21 GDVDDIGVDAKLQHPLGVAYCDSNRTLYLADTYNHKIKKVDIGPQKVTSL 170
G +D DA+ + P GVA D +Y+ADT N I+K IG VT++
Sbjct: 138 GHIDGKPSDARFKRPTGVA-VDDTGNVYVADTANLAIRK--IGESGVTTI 184
>08_01_0239 -
1993833-1994114,1994266-1994436,1994541-1994686,
1995127-1995182,1995314-1995437,1995527-1995712,
1995787-1995845,1996413-1996630,1996853-1996966,
1997339-1997466,1997591-1997650,1998225-1998386,
1998796-1998883
Length = 597
Score = 32.7 bits (71), Expect = 0.13
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +3
Query: 48 AKLQHPLGVAYCDSNRTLYLADTYNHKIKKVDIGPQKVTSLNPTMIETADP--AEFNEPS 221
AK P Y + LY+ D+ NH ++K D+G + + ++ P +++ + +
Sbjct: 161 AKFLRPAASFYNTAEDCLYIVDSENHAVRKADLGRRMLETVYPVSSKSSSGIWSWIVDKL 220
Query: 222 GLSASSDGKYLYIADTNNHTVKILNLAKN 308
GL +IAD+ +LN+ ++
Sbjct: 221 GLRREDAPSENFIADSIAFPWHLLNITED 249
>08_01_0503 + 4364678-4364976,4365320-4365595,4366091-4366586
Length = 356
Score = 29.9 bits (64), Expect = 0.95
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +3
Query: 63 PLGVAYCDSNRTLYLADTYNHKIKKVDIGPQKVTSLNPTMIETADPAEFNEPSGLSASSD 242
PLG+A+ D LY+AD Y ++ +GP+ + + AD FN +G+
Sbjct: 122 PLGLAFHDRTGDLYIADAYKGLMR---VGPRGGEA--EVLAAGADGVPFNFVNGIDVDQA 176
Query: 243 GKYLYIADTN 272
+Y D++
Sbjct: 177 TGDVYFTDSS 186
>01_06_1313 - 36212524-36213669
Length = 381
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = -3
Query: 289 IFTVWLLVSAMYRYLPSLLAESPDGSLNSAGSAVSIIVGFSDVTFCGPISTFFIL 125
++T+ LL+SA +L S+L+ + + + +++ S TF GPI+ F ++
Sbjct: 148 LWTIALLMSAYLFFLISILSRTMRPTTVFVHISYGVLLAISAGTFAGPIAGFAVM 202
>11_04_0275 + 15685501-15685663,15685869-15685994,15687015-15687166
Length = 146
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 24 DVDDIGVDAKLQHPLGVAYCDSNR 95
D D +G++ K + P GV CD +R
Sbjct: 105 DTDRVGLEGKAERPSGVGPCDGDR 128
>08_02_0820 - 21542640-21543129,21543244-21543510,21543720-21544015
Length = 350
Score = 28.7 bits (61), Expect = 2.2
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 63 PLGVAYCDSNRTLYLADTYNHKIKKVDIGPQKVTSLNPTMIETADPAEFNEPSGLSASSD 242
PLG+A+ LY AD Y ++ +GP+ + + AD FN +G+ D
Sbjct: 118 PLGLAFHLKTGILYFADAYKGLMR---VGPRGGQA--DVLATEADGVPFNYLNGVDVDQD 172
Query: 243 GKYLYIADTN 272
+Y D++
Sbjct: 173 TGDVYFTDSS 182
>04_04_1465 +
33794225-33794389,33794471-33794597,33794669-33794799,
33795153-33795254,33795337-33795420,33795504-33795731,
33795934-33796038,33796376-33796731,33797146-33797303,
33797399-33797505,33797852-33798061
Length = 590
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 84 DSNRTLYLADTYNHKIKKVDIGPQKVT 164
DSNR + +A HK K VD+G K T
Sbjct: 206 DSNRAMLIAAAIQHKCKVVDLGIAKDT 232
>12_01_0254 + 1885412-1885683,1886123-1886389,1886501-1887077
Length = 371
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 216 PSGLSASSDGKYLYIADTNNHTVKIL 293
P+GL+ S+DG YL +A+T T KIL
Sbjct: 215 PNGLAMSNDGSYLLLAETT--TGKIL 238
>07_03_0786 + 21510477-21511451,21512272-21512499
Length = 400
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 45 DAKLQHPLGVAYCDSNRTLYLADTYNHKIKKVDIGPQKVTSLNPTMIET-ADPAEFNEPS 221
++K PLG+ + +++ LY+AD Y ++ +GP+ T++ T AD F +
Sbjct: 114 ESKCGRPLGLRFHNTSGNLYIADAYKGLMR---VGPR---GGEATVLATEADGVPFKFTN 167
Query: 222 GLSASSDGKYLYIADTN 272
G+ + +Y D++
Sbjct: 168 GVDVNQVTGEVYFTDSS 184
>07_03_0781 - 21477797-21478549
Length = 250
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 45 DAKLQHPLGVAYCDSNRTLYLADTYNHKIKKVDIGPQKVTSLNPTMIET-ADPAEFNEPS 221
++K PLG+ + +++ LY+AD Y ++ +GP+ T++ T AD F +
Sbjct: 12 ESKCGRPLGLRFHNTSGNLYIADAYKGLMR---VGPR---GGEATVLATEADGVPFKFTN 65
Query: 222 GLSASSDGKYLYIADTN 272
G+ + +Y D++
Sbjct: 66 GVDVNQVTGEVYFTDSS 82
>07_03_0779 - 21464249-21464257,21465400-21466374
Length = 327
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 45 DAKLQHPLGVAYCDSNRTLYLADTYNHKIKKVDIGPQKVTSLNPTMIET-ADPAEFNEPS 221
++K PLG+ + +++ LY+AD Y ++ +GP+ T++ T AD F +
Sbjct: 114 ESKCGRPLGLRFHNTSGNLYIADAYKGLMR---VGPR---GGEATVLATEADGVPFKFTN 167
Query: 222 GLSASSDGKYLYIADTN 272
G+ + +Y D++
Sbjct: 168 GVDVNQVTGEVYFTDSS 184
>03_02_0842 + 11682332-11683802,11683858-11683940,11684751-11686553,
11687783-11688633,11689230-11689299,11689597-11689641
Length = 1440
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 192 ADPAEFNEPSGLSASSDGKYLYIADTNNHTVKILNLAKNVCQDFKVRLAEPKFSE 356
+DP + + GL YIADT ++ L++ V D + +L PK+ E
Sbjct: 1249 SDPTKLVQ--GLRKDGRAPSSYIADTTTANAQVRTLSETVRLDARTKLLNPKWYE 1301
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 87 SNRTLYLADTYNHKIKKVDIGPQKVTSLNPTMIETADPAEFNEPSGLSASSD 242
+N+ L+D ++ D GP T + PT ++ AD + G S +D
Sbjct: 807 TNQQSQLSDPQSYAEVNRDGGPTSYTDITPTCLDEADFEDNASEDGFSGGTD 858
>05_06_0264 +
26756337-26756411,26756494-26756594,26757196-26757369,
26757449-26757548,26757869-26758006,26758104-26758185,
26758631-26758680,26758748-26758873
Length = 281
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +3
Query: 102 YLADTYNHKIKKVDIGPQKVTSLNPTMIETADPAEFNEPSGLSASSDGKYLYIADTNNH 278
+++ + +H ++ D+ T + D AE ++ + S+DGK + + TNNH
Sbjct: 130 FMSGSLDHSVRIWDLRVNACQGPFDTFLVGGDTAEVSD---IKFSNDGKSMLLTTTNNH 185
>04_04_0482 -
25547393-25547455,25547767-25547866,25548154-25548203,
25548883-25548969,25549343-25549429,25549510-25550009,
25550061-25550134,25550548-25551632
Length = 681
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 278 HRENSQPGEERLPRL*STSRGTEVLRA 358
H +N+QP R ST+RG VLR+
Sbjct: 564 HEDNAQPTSRTARRFQSTTRGPRVLRS 590
>02_02_0011 +
6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 180 MIETADPAEFNEPSGLSASSDGKYLYIADTNNHTVKILN 296
+++T D +E GL+ +DG LY+ + TV+IL+
Sbjct: 762 LLQTIDSYISDERVGLAEPADGIELYLCPSQGKTVEILS 800
>01_06_0759 +
31754616-31754647,31754862-31755077,31755186-31755341,
31755446-31755503,31755618-31755935,31756026-31756265,
31756345-31756443,31756529-31756561,31756670-31756867
Length = 449
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -3
Query: 316 WQTFFARLRIFTVWL--LVSAMYRYLPS 239
W+TF L +++ W+ L A RYLPS
Sbjct: 13 WETFLIILVVYSAWICPLEFAFLRYLPS 40
>11_01_0256 + 1969292-1969563,1970004-1970270,1970413-1970989
Length = 371
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 216 PSGLSASSDGKYLYIADTNNHTVKIL 293
P+GL+ S DG YL +A+T T KIL
Sbjct: 215 PNGLAMSIDGSYLLLAETT--TGKIL 238
>07_03_1540 -
27570605-27571375,27571474-27572748,27572769-27572921,
27572923-27573159
Length = 811
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 192 ADPAEFNEPSGLSASSDGKYLYIADTNNHTVKILNLAKNVCQDFKVRLAEPKF 350
+DP + + GL YIADT ++ L++ V D + +L PK+
Sbjct: 685 SDPTKLVQ--GLRKDERAPSSYIADTTTANAQVRTLSETVRLDARTKLLNPKW 735
>03_06_0777 +
36181095-36181311,36181444-36181530,36181785-36182725,
36182956-36183006,36183240-36183328,36184975-36185078,
36185179-36185278,36185396-36185471,36185556-36185670,
36185755-36186286,36187032-36187527
Length = 935
Score = 27.1 bits (57), Expect = 6.7
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 87 SNRTLYLADTYNHKIKKVDIGPQKVTSLNPTMIETADPAEFNEPSGLSASSDGK 248
S T Y+ DT N +I + T + TM+ + D + E S +ASSD K
Sbjct: 237 SEGTPYVEDTLNCEITLPENQHLGETLTSDTMLGSGDASLIQEISDTAASSDAK 290
>02_05_1168 +
34651143-34651424,34651983-34652138,34652239-34652346,
34652778-34652888,34652985-34654421,34654598-34654852
Length = 782
Score = 27.1 bits (57), Expect = 6.7
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 183 IETADPAEFNEPSGLSASSDGKYLYIADTNNHTVKILNLAKNVCQDFKVRLAEPKFSEPD 362
+E AD + N SG + +YI + H +K L L N C +L E F E
Sbjct: 629 LEAADENKENNASGQDGLLE---VYIKWESGHLIKGLKLLSNSCLSDLRKLLEDHFEEAG 685
Query: 363 S 365
S
Sbjct: 686 S 686
>07_03_0784 + 21505204-21505950
Length = 248
Score = 26.6 bits (56), Expect = 8.8
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 45 DAKLQHPLGVAYCDSNRTLYLADTYNHKIKKVDIGPQKVTSLNPTMIET-ADPAEFNEPS 221
++K PLG+ + +++ Y+AD Y ++ +GP+ T++ T AD F +
Sbjct: 12 ESKCGRPLGLRFHNTSGNFYIADAYRGLMR---VGPR---GGEATVLATEADGVPFKFTN 65
Query: 222 GLSASSDGKYLYIADTN 272
G+ + +Y D++
Sbjct: 66 GVDVNQVTGEVYFTDSS 82
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +3
Query: 153 QKVTSLNPTMIETADPAEFNEPSGLSAS--SDGKYLYIADTNNHTVKILNLAKNVCQD 320
++V+SL P ++ P E D K + I D NH +++L+ C D
Sbjct: 315 ERVSSLFPFHVDIKPPEEETHLDSWKTQMEEDTKKIQIQDNRNHIIEVLSANDLDCDD 372
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 367 KLSGSENFGSARRTLKSWQTFFARLRIFTVWLLVSAMYRYLPSLLAES 224
K SGS G + LK+WQ A + ++ V+ L Y + SL A S
Sbjct: 269 KESGSGRMGHTKSLLKNWQLMSA-ITLYCVFSLHDTAYLEIFSLWAVS 315
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,383,128
Number of Sequences: 37544
Number of extensions: 183999
Number of successful extensions: 568
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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