Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_F22
         (365 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6LFC8 Cluster: Putative uncharacterized protein; n=3; ...    33   2.1  
UniRef50_A2D8T7 Cluster: Putative uncharacterized protein; n=20;...    31   8.6  

>UniRef50_Q6LFC8 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1842

 Score = 32.7 bits (71), Expect = 2.1
 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = -3

Query: 246  ENANKRRRINLLTSYNRIY-YHINNLILLDVAVLAVTNM*LYLNHVNSEKIVTQRLLSRI 70
            +N N    IN L +  +I  Y+IN+  L++  V  + +   Y NH+    I+T+++++ +
Sbjct: 1556 KNDNNMYYINKLKNILQIEDYNINSFELIERIVNIIKS---YKNHIKDNFIITEKIINSL 1612

Query: 69   IYK*KLLNI 43
            +Y    +NI
Sbjct: 1613 LYSDPFMNI 1621


>UniRef50_A2D8T7 Cluster: Putative uncharacterized protein; n=20;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 414

 Score = 30.7 bits (66), Expect = 8.6
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -3

Query: 201 NRIYYHINNLILLDVAVLAVTNM*LYLNH----VNSEKIVTQRLLSRIIYK 61
           N+I Y INN    D  +LAV N+ + LN       S+KI +Q LL   I K
Sbjct: 8   NQILYRINNYNSQDKVILAVNNVEILLNKSFAVAISQKIFSQYLLDNGITK 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 268,770,865
Number of Sequences: 1657284
Number of extensions: 4214809
Number of successful extensions: 6867
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6866
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13220924981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)