Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_F15
         (253 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.11 
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   0.59 
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   0.59 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   2.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    19   9.6  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    19   9.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   9.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     19   9.6  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 25.4 bits (53), Expect = 0.11
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -2

Query: 132  YASLRSFIEVLSMASPKAVLLYSWSKK*NARTLQTAITANKSSC 1
            +  LRS +E+L ++  + V    W    NAR ++ ++ +N  SC
Sbjct: 886  FLPLRS-LEILRLSGNRLVTFPVWQVTLNARLVELSLGSNPWSC 928



 Score = 19.0 bits (37), Expect = 9.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 156  LCLHH*A**C*CFSTNQAPVKVVVWRATK 242
            LCLHH    C   ++  APV +    A++
Sbjct: 1097 LCLHHRDLPCVLRASTPAPVVLEAVHASR 1125


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 0.59
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 230 PHDYLHRRLIRREALASSRLMVKTQHSCPSQMY 132
           P D + RR++ +   A S ++ K+   C + +Y
Sbjct: 232 PFDTVRRRMMMQSGRAKSEILYKSTLHCWATIY 264


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 0.59
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 230 PHDYLHRRLIRREALASSRLMVKTQHSCPSQMY 132
           P D + RR++ +   A S ++ K+   C + +Y
Sbjct: 232 PFDTVRRRMMMQSGRAKSEILYKSTLHCWATIY 264


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +3

Query: 15  SRLSRSATCEHSISLTTSTTGQP*VTPLIK 104
           S+L +     H I++ ++T  +  VTP+++
Sbjct: 162 SKLLKQVKIPHDIAINSTTGKRNVVTPIVQ 191


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 102 LSMASPKAVLLYSWSK 55
           +S  S  A+++YSW+K
Sbjct: 191 ISDLSGYALVVYSWAK 206


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 224 DYLHRRLIRREALASSRLMVKTQ 156
           DYLH R I    L    L++ +Q
Sbjct: 480 DYLHSRNIIYRDLKPENLLLDSQ 502


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 4/13 (30%), Positives = 10/13 (76%)
 Frame = -1

Query: 163 RHNILVLPRCICF 125
           +H  +++P+ +CF
Sbjct: 71  KHPTIIMPQDVCF 83


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 4/22 (18%), Positives = 13/22 (59%)
 Frame = +1

Query: 127 SIYIWEGQECCVFTIRRDDANA 192
           ++ +W+ QEC   ++   + ++
Sbjct: 112 NVLLWDFQECTFISVNGKEVHS 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,915
Number of Sequences: 438
Number of extensions: 999
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4527252
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)