Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_F14
         (316 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TRU1 Cluster: Putative uncharacterized protein; n=1; ...    33   1.2  
UniRef50_Q8DTJ6 Cluster: Putative gramicidin S synthetase; n=1; ...    32   2.2  
UniRef50_Q8EZD8 Cluster: Putative uncharacterized protein; n=4; ...    32   2.9  
UniRef50_A5K0J9 Cluster: Putative uncharacterized protein; n=2; ...    32   2.9  
UniRef50_A7HM62 Cluster: Ste24 endopeptidase; n=1; Fervidobacter...    31   3.8  
UniRef50_Q8C019 Cluster: Adult male olfactory brain cDNA, RIKEN ...    31   5.0  
UniRef50_Q8KA32 Cluster: Uncharacterized protein BUsg_080; n=1; ...    31   6.6  
UniRef50_O30916 Cluster: Inositol phosphate phosphatase sopB; n=...    31   6.6  
UniRef50_Q30YF7 Cluster: ATPase (AAA+ superfamily)-like; n=3; De...    30   8.7  
UniRef50_Q8I565 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  
UniRef50_Q10068 Cluster: Uncharacterized protein C3H1.02c; n=1; ...    30   8.7  

>UniRef50_A7TRU1 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 617

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +2

Query: 185 TGVRQVRN-KSLYAKTKRNRDLRVIAILSDSLSRAESELITKQ 310
           TG R+ +N K+  A TK N  +  ++I++D+ +   SE+ITKQ
Sbjct: 522 TGTRRGKNNKATIADTKPNESMLEMSIMNDANAMMNSEIITKQ 564


>UniRef50_Q8DTJ6 Cluster: Putative gramicidin S synthetase; n=1;
           Streptococcus mutans|Rep: Putative gramicidin S
           synthetase - Streptococcus mutans
          Length = 1229

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 13/28 (46%), Positives = 24/28 (85%)
 Frame = -1

Query: 85  YYTPESVQAQRLLEALHNTIRRLYSTLV 2
           Y++P+S  ++RL+E+L NTI+ +Y+T+V
Sbjct: 177 YFSPQSY-SERLIESLLNTIKSIYNTIV 203


>UniRef50_Q8EZD8 Cluster: Putative uncharacterized protein; n=4;
           Leptospira|Rep: Putative uncharacterized protein -
           Leptospira interrogans
          Length = 334

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = +2

Query: 65  YGFRCVILQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLTGVRQVRNKSLYAKTKRNR 241
           Y F   IL N Y LP+       K  +L +F+K+K    +T + Q   K LY    RNR
Sbjct: 279 YPFHFTILWNNYNLPFD---LALKELVLELFLKIKLKGVMTRMLQTVAKGLYTIIGRNR 334


>UniRef50_A5K0J9 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 4126

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 168 FTFTKINNRFLFGTVAHDE*GRKYLFCNITHLNPYRHKDYLRHYTTQSDVC 16
           F F KI+ + +  TV+H++ G K LFC     N    K +L  +   SD+C
Sbjct: 758 FIFYKISRKNILHTVSHEKTGAKRLFCYYNWANLV--KLFLYLFPIWSDIC 806


>UniRef50_A7HM62 Cluster: Ste24 endopeptidase; n=1; Fervidobacterium
           nodosum Rt17-B1|Rep: Ste24 endopeptidase -
           Fervidobacterium nodosum Rt17-B1
          Length = 406

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 167 KQNLYLTGVRQVRNKSLYAKTKRNRDLRVIAILSDSLSRAESELITK 307
           KQN YLTG+ + R   LY    +  D  ++A+++  L       I K
Sbjct: 237 KQNAYLTGIGKARRLVLYDNILKQTDDEILAVVAHELGHHAHRHIAK 283


>UniRef50_Q8C019 Cluster: Adult male olfactory brain cDNA, RIKEN
          full-length enriched library, clone:6430587E11
          product:similar to COPINE VII; n=2;
          Euarchontoglires|Rep: Adult male olfactory brain cDNA,
          RIKEN full-length enriched library, clone:6430587E11
          product:similar to COPINE VII - Mus musculus (Mouse)
          Length = 116

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 90 CNITHLNPYRHKDYLRHYTTQSDVC 16
          C++ H+NPY+  +YLR      +VC
Sbjct: 1  CSLHHINPYQPNEYLRALVAVGEVC 25


>UniRef50_Q8KA32 Cluster: Uncharacterized protein BUsg_080; n=1;
           Buchnera aphidicola (Schizaphis graminum)|Rep:
           Uncharacterized protein BUsg_080 - Buchnera aphidicola
           subsp. Schizaphis graminum
          Length = 968

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/62 (20%), Positives = 31/62 (50%)
 Frame = +2

Query: 113 SSWATVPKRNLLLIFVKVKQNLYLTGVRQVRNKSLYAKTKRNRDLRVIAILSDSLSRAES 292
           +SW     RN  LIF  +K ++    +++++NK+ +     N    +  ++  S  + ++
Sbjct: 656 TSWGQWISRNNPLIFYHIKNSINFKNIKKIKNKNAFYSAINNIQTSLFKLIRQSPVKFQT 715

Query: 293 EL 298
           +L
Sbjct: 716 DL 717


>UniRef50_O30916 Cluster: Inositol phosphate phosphatase sopB; n=10;
           Salmonella|Rep: Inositol phosphate phosphatase sopB -
           Salmonella typhimurium
          Length = 561

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -2

Query: 150 NNRFLFGTVAHDE*GRKYLFCNITH--LNPYRHKD-YLRH 40
           NN ++     H++   K LFC I H  L+PY  KD  LRH
Sbjct: 224 NNLWMSTVSVHEDGKDKTLFCGIRHGVLSPYHEKDPLLRH 263


>UniRef50_Q30YF7 Cluster: ATPase (AAA+ superfamily)-like; n=3;
           Deltaproteobacteria|Rep: ATPase (AAA+ superfamily)-like
           - Desulfovibrio desulfuricans (strain G20)
          Length = 542

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = +2

Query: 170 QNLYLTGVRQVRNKSLYAKTKRNRDLRVIAILSDSLSRAESELI 301
           +NL  T +R+V  +  Y KTK  R++ ++A+L  +  + ++ L+
Sbjct: 433 ENLVFTALRRVTPEIFYHKTKTGREVDLVALLPSAPGQEQAILL 476


>UniRef50_Q8I565 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2026

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 150  NNRFLFGTVAHDE*GRKYLFCNITHLNPYRHKDYL 46
            N R  +   +H +    YLFC+ TH N + HK+Y+
Sbjct: 1507 NERIYYKDKSHLK--NNYLFCDYTHKNNFYHKNYV 1539


>UniRef50_Q10068 Cluster: Uncharacterized protein C3H1.02c; n=1;
           Schizosaccharomyces pombe|Rep: Uncharacterized protein
           C3H1.02c - Schizosaccharomyces pombe (Fission yeast)
          Length = 1036

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 19/49 (38%), Positives = 31/49 (63%)
 Frame = +2

Query: 134 KRNLLLIFVKVKQNLYLTGVRQVRNKSLYAKTKRNRDLRVIAILSDSLS 280
           KR LL I +KV +  Y  GV  +RN  L AKT  +R+ R++++++  L+
Sbjct: 638 KRELLSIEIKVTRENYEKGVYWIRN--LLAKTVWDRE-RMLSVINQQLA 683


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,892,403
Number of Sequences: 1657284
Number of extensions: 4766324
Number of successful extensions: 10961
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10961
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)