Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_F14
(316 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y09077-1|CAA70298.1| 2644|Homo sapiens atr protein. 29 2.9
U76308-1|AAC50929.1| 2644|Homo sapiens protein kinase ATR protein. 29 2.9
U49844-1|AAC50405.1| 2644|Homo sapiens FRAP-related protein prot... 29 2.9
AL355001-2|CAI16180.1| 382|Homo sapiens zinc finger, MYM-type 5... 28 6.6
AL355001-1|CAI16178.1| 493|Homo sapiens zinc finger, MYM-type 5... 28 6.6
AL354808-2|CAI41001.1| 493|Homo sapiens zinc finger, MYM-type 5... 28 6.6
AJ133352-1|CAB57262.1| 382|Homo sapiens ZNF237 protein protein. 28 6.6
BC064577-1|AAH64577.1| 558|Homo sapiens CPNE7 protein protein. 27 8.8
BC035334-1|AAH35334.1| 558|Homo sapiens copine VII protein. 27 8.8
AJ133799-1|CAB61446.1| 633|Homo sapiens copine VII protein prot... 27 8.8
AJ133798-1|CAB61431.1| 633|Homo sapiens copine VII protein prot... 27 8.8
>Y09077-1|CAA70298.1| 2644|Homo sapiens atr protein.
Length = 2644
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 294 SLSARLSESLKMAITLKSRFLFVLA*RDLFLTWRTPV 184
+LS R+S+S + FL L R +FL WRT V
Sbjct: 619 TLSCRISDSYSPQAQSRCVFLLTLFPRRIFLEWRTAV 655
>U76308-1|AAC50929.1| 2644|Homo sapiens protein kinase ATR protein.
Length = 2644
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 294 SLSARLSESLKMAITLKSRFLFVLA*RDLFLTWRTPV 184
+LS R+S+S + FL L R +FL WRT V
Sbjct: 619 TLSCRISDSYSPQAQSRCVFLLTLFPRRIFLEWRTAV 655
>U49844-1|AAC50405.1| 2644|Homo sapiens FRAP-related protein
protein.
Length = 2644
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 294 SLSARLSESLKMAITLKSRFLFVLA*RDLFLTWRTPV 184
+LS R+S+S + FL L R +FL WRT V
Sbjct: 619 TLSCRISDSYSPQAQSRCVFLLTLFPRRIFLEWRTAV 655
>AL355001-2|CAI16180.1| 382|Homo sapiens zinc finger, MYM-type 5
protein.
Length = 382
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 132 GTVAHDE*GRKYLFCNITHLNPYRHKDYLRHYTTQSDVC 16
G A+ G +LFC+ T L+ + HK R T+S +C
Sbjct: 254 GQTAYQRKGSAHLFCSTTCLSSFSHK---RTQNTRSIIC 289
>AL355001-1|CAI16178.1| 493|Homo sapiens zinc finger, MYM-type 5
protein.
Length = 493
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 132 GTVAHDE*GRKYLFCNITHLNPYRHKDYLRHYTTQSDVC 16
G A+ G +LFC+ T L+ + HK R T+S +C
Sbjct: 78 GQTAYQRKGSAHLFCSTTCLSSFSHK---RTQNTRSIIC 113
>AL354808-2|CAI41001.1| 493|Homo sapiens zinc finger, MYM-type 5
protein.
Length = 493
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 132 GTVAHDE*GRKYLFCNITHLNPYRHKDYLRHYTTQSDVC 16
G A+ G +LFC+ T L+ + HK R T+S +C
Sbjct: 78 GQTAYQRKGSAHLFCSTTCLSSFSHK---RTQNTRSIIC 113
>AJ133352-1|CAB57262.1| 382|Homo sapiens ZNF237 protein protein.
Length = 382
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 132 GTVAHDE*GRKYLFCNITHLNPYRHKDYLRHYTTQSDVC 16
G A+ G +LFC+ T L+ + HK R T+S +C
Sbjct: 254 GQTAYQRKGSAHLFCSTTCLSSFSHK---RTQNTRSIIC 289
>BC064577-1|AAH64577.1| 558|Homo sapiens CPNE7 protein protein.
Length = 558
Score = 27.5 bits (58), Expect = 8.8
Identities = 7/25 (28%), Positives = 17/25 (68%)
Frame = -2
Query: 90 CNITHLNPYRHKDYLRHYTTQSDVC 16
C++ ++NPY+ +YL+ + ++C
Sbjct: 325 CSLHYINPYQPNEYLKALVSVGEIC 349
>BC035334-1|AAH35334.1| 558|Homo sapiens copine VII protein.
Length = 558
Score = 27.5 bits (58), Expect = 8.8
Identities = 7/25 (28%), Positives = 17/25 (68%)
Frame = -2
Query: 90 CNITHLNPYRHKDYLRHYTTQSDVC 16
C++ ++NPY+ +YL+ + ++C
Sbjct: 325 CSLHYINPYQPNEYLKALVSVGEIC 349
>AJ133799-1|CAB61446.1| 633|Homo sapiens copine VII protein
protein.
Length = 633
Score = 27.5 bits (58), Expect = 8.8
Identities = 7/25 (28%), Positives = 17/25 (68%)
Frame = -2
Query: 90 CNITHLNPYRHKDYLRHYTTQSDVC 16
C++ ++NPY+ +YL+ + ++C
Sbjct: 400 CSLHYINPYQPNEYLKALVSVGEIC 424
>AJ133798-1|CAB61431.1| 633|Homo sapiens copine VII protein
protein.
Length = 633
Score = 27.5 bits (58), Expect = 8.8
Identities = 7/25 (28%), Positives = 17/25 (68%)
Frame = -2
Query: 90 CNITHLNPYRHKDYLRHYTTQSDVC 16
C++ ++NPY+ +YL+ + ++C
Sbjct: 400 CSLHYINPYQPNEYLKALVSVGEIC 424
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,889,038
Number of Sequences: 237096
Number of extensions: 719611
Number of successful extensions: 930
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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