Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_F09
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   2.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   8.7  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          20   8.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    20   8.7  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 78  SCRTGCMHPSGGGGQPPAEQEYGHT*SHLH 167
           +C +  ++PS  G  PP+   + H  S  H
Sbjct: 298 ACHSPGVYPSTAGFLPPSYHPHQHHPSQYH 327


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -2

Query: 161 MALSVAIFLFCW 126
           +A+ + +FL CW
Sbjct: 621 LAIVLGVFLICW 632


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 253 DLKAARPYGEGAVQFYERAEV 315
           D+   R  GEG+   +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 253 DLKAARPYGEGAVQFYERAEV 315
           D+   R  GEG+   +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 253 DLKAARPYGEGAVQFYERAEV 315
           D+   R  GEG+   +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 253 DLKAARPYGEGAVQFYERAEV 315
           D+   R  GEG+   +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 253 DLKAARPYGEGAVQFYERAEV 315
           D+   R  GEG+   +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 253 DLKAARPYGEGAVQFYERAEV 315
           D+   R  GEG+   +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 253 DLKAARPYGEGAVQFYERAEV 315
           D+   R  GEG+   +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 253 DLKAARPYGEGAVQFYERAEV 315
           D+   R  GEG+   +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,148
Number of Sequences: 438
Number of extensions: 2405
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)