Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_F06
(221 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P35589 Cluster: Synaptobrevin; n=2; Protostomia|Rep: Sy... 50 1e-05
UniRef50_Q86FE0 Cluster: Clone ZZD1498 mRNA sequence; n=1; Schis... 47 7e-05
UniRef50_P18489 Cluster: Synaptobrevin; n=4; Sophophora|Rep: Syn... 43 0.001
UniRef50_Q9WUW2 Cluster: Vesicle associated membrane protein 2B;... 42 0.004
UniRef50_P63027 Cluster: Vesicle-associated membrane protein 2; ... 42 0.004
UniRef50_Q27236 Cluster: Synaptobrevin-like protein; n=3; Bilate... 40 0.014
UniRef50_Q9CXX2 Cluster: 12 days embryo head cDNA, RIKEN full-le... 38 0.044
UniRef50_P23763 Cluster: Vesicle-associated membrane protein 1; ... 36 0.13
UniRef50_Q86FE1 Cluster: Clone ZZD1497 mRNA sequence; n=1; Schis... 32 2.2
UniRef50_P47062 Cluster: Uncharacterized protein YJL028W; n=1; S... 31 6.7
UniRef50_UPI00015551A0 Cluster: PREDICTED: similar to Rho GTPase... 30 8.8
UniRef50_A0D620 Cluster: Chromosome undetermined scaffold_39, wh... 30 8.8
>UniRef50_P35589 Cluster: Synaptobrevin; n=2; Protostomia|Rep:
Synaptobrevin - Aplysia californica (California sea
hare)
Length = 180
Score = 49.6 bits (113), Expect = 1e-05
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = +2
Query: 122 QGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVE 220
QGG PR KRL QTQA+VDEVV IMRVNVE
Sbjct: 9 QGGMQPPREQSKRLQQTQAQVDEVVDIMRVNVE 41
>UniRef50_Q86FE0 Cluster: Clone ZZD1498 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD1498 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 160
Score = 47.2 bits (107), Expect = 7e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 125 GGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVE 220
GG+ PR +KRL QTQA+VDEVV IMRVN+E
Sbjct: 13 GGAPQPRPQNKRLQQTQAQVDEVVDIMRVNME 44
>UniRef50_P18489 Cluster: Synaptobrevin; n=4; Sophophora|Rep:
Synaptobrevin - Drosophila melanogaster (Fruit fly)
Length = 152
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2
Query: 149 SDKRLAQTQAKVDEVVGIMRVNVE 220
+ K+L QTQAKVDEVVGIMRVNVE
Sbjct: 44 AQKKLQQTQAKVDEVVGIMRVNVE 67
>UniRef50_Q9WUW2 Cluster: Vesicle associated membrane protein 2B;
n=3; Theria|Rep: Vesicle associated membrane protein 2B
- Rattus norvegicus (Rat)
Length = 135
Score = 41.5 bits (93), Expect = 0.004
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = +2
Query: 122 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVE 220
+GG AP S++RL QTQA+VDEVV IMRVNV+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVD 51
>UniRef50_P63027 Cluster: Vesicle-associated membrane protein 2;
n=32; Coelomata|Rep: Vesicle-associated membrane protein
2 - Homo sapiens (Human)
Length = 116
Score = 41.5 bits (93), Expect = 0.004
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = +2
Query: 122 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVE 220
+GG AP S++RL QTQA+VDEVV IMRVNV+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVD 51
>UniRef50_Q27236 Cluster: Synaptobrevin-like protein; n=3;
Bilateria|Rep: Synaptobrevin-like protein - Schistosoma
mansoni (Blood fluke)
Length = 131
Score = 39.5 bits (88), Expect = 0.014
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 137 APRVSDKRLAQTQAKVDEVVGIMRVNVE 220
AP ++KRL QTQA+V+EVV IMRVNV+
Sbjct: 11 APIKTNKRLQQTQAQVNEVVDIMRVNVD 38
>UniRef50_Q9CXX2 Cluster: 12 days embryo head cDNA, RIKEN
full-length enriched library, clone:3010005E14
product:vesicle-associated membrane protein 1, full
insert sequence; n=7; Bilateria|Rep: 12 days embryo head
cDNA, RIKEN full-length enriched library,
clone:3010005E14 product:vesicle-associated membrane
protein 1, full insert sequence - Mus musculus (Mouse)
Length = 182
Score = 37.9 bits (84), Expect = 0.044
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = +2
Query: 125 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVE 220
GG P S++RL QTQA+V+EVV IMRVNV+
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIMRVNVD 53
>UniRef50_P23763 Cluster: Vesicle-associated membrane protein 1;
n=84; Eumetazoa|Rep: Vesicle-associated membrane protein
1 - Homo sapiens (Human)
Length = 118
Score = 36.3 bits (80), Expect = 0.13
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = +2
Query: 125 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVE 220
GG P S++RL QTQA+V+EVV I+RVNV+
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVD 53
>UniRef50_Q86FE1 Cluster: Clone ZZD1497 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD1497 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 143
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 149 SDKRLAQTQAKVDEVVGIMRVNV 217
+D R+ Q QAKV EVVGIM+ NV
Sbjct: 51 ADDRIRQHQAKVQEVVGIMKDNV 73
>UniRef50_P47062 Cluster: Uncharacterized protein YJL028W; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YJL028W - Saccharomyces cerevisiae (Baker's yeast)
Length = 111
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 190 FIYFSLSLC*TFVA---HSRC*TSSLLFHCQIMLYFY 89
FI+FSL LC F+A H C +LF I+L FY
Sbjct: 33 FIFFSLHLCALFLATAVHYACFACFVLFRHAILLLFY 69
>UniRef50_UPI00015551A0 Cluster: PREDICTED: similar to Rho GTPase
activating protein 30, partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to Rho GTPase
activating protein 30, partial - Ornithorhynchus
anatinus
Length = 957
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 116 EEQGGSSAPRVS--DKRLAQTQAKVDEVVGIMRVNVE 220
EE GG + RV D+ AQTQA+ D VG NVE
Sbjct: 598 EEAGGEAEVRVEAGDRAEAQTQAQADPEVGGEEANVE 634
>UniRef50_A0D620 Cluster: Chromosome undetermined scaffold_39, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_39,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2470
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 119 EQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNV 217
EQ GSS ++DK Q Q ++++V IM++N+
Sbjct: 426 EQSGSSDVAITDKIEKQQQKDLEDLVKIMKINI 458
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,797,080
Number of Sequences: 1657284
Number of extensions: 2163600
Number of successful extensions: 3683
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3683
length of database: 575,637,011
effective HSP length: 52
effective length of database: 489,458,243
effective search space used: 10278623103
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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