Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_F06
         (221 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   1.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   6.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    19   8.4  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 1.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 104 YVIFLYKN**ILENCIYIITK 42
           YV+ LY    ILE+ +Y++TK
Sbjct: 270 YVLILY----ILESLLYMVTK 286


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 2.1
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +2

Query: 65  FLIFTSSCI 91
           F+IFTS+CI
Sbjct: 178 FMIFTSTCI 186



 Score = 18.6 bits (36), Expect = 8.4
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = -3

Query: 117 SIVKLCYIFIQELVNIRKLYLYYN 46
           S+++L ++F   +      Y+YY+
Sbjct: 139 SLLQLVFVFCYFIYLFTVYYIYYS 162


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +2

Query: 101 HNLTMEEQGGSSAPR 145
           HN TME      APR
Sbjct: 846 HNFTMEYLVSRGAPR 860


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 18.6 bits (36), Expect = 8.4
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = -2

Query: 127 SLLFHCQIMLY 95
           ++L+ C+IM+Y
Sbjct: 331 NILYFCRIMVY 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,052
Number of Sequences: 336
Number of extensions: 650
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  3009020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)