Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_F06
         (221 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   1.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           21   3.9  
AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           21   6.8  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           21   6.8  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           21   6.8  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    21   6.8  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           20   9.0  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    20   9.0  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +2

Query: 83  SCIKI*HNLTMEEQGGSS---APRVSDKRLAQTQAKVDEV 193
           +C+ I H+L    QGG S   + R  +  + + + K DE+
Sbjct: 14  ACLSIVHSLMCHRQGGESEGFSKRAIESLVKKLKEKRDEL 53


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 113  MEEQGGSSAPRVSDKRLAQT 172
            MEE G  S P  S  RLA++
Sbjct: 1442 MEEGGRQSTPPASPARLARS 1461


>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 101 HNLTMEEQGGSSAPRVSDKRLAQTQAKVDEVVGIMR 208
           H LT+ +        + D+RLA  +A  + ++ +M+
Sbjct: 28  HKLTVMDYSLKEDRVIIDRRLAYQEAISEGILAVMK 63


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 101 HNLTMEEQGGSSAPRVSDKRLAQTQAKVDEVVGIMR 208
           H LT+ +        + D+RLA  +A  + ++ +M+
Sbjct: 28  HKLTVMDYSLKEDRVIIDRRLAYQEAISEGILAVMK 63


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 101 HNLTMEEQGGSSAPRVSDKRLAQTQAKVDEVVGIMR 208
           H LT+ +        + D+RLA  +A  + ++ +M+
Sbjct: 28  HKLTVMDYSLKEDRVIIDRRLAYQEAISEGILAVMK 63


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 132 LPPCSSIVKLCYIF 91
           + PC  IV L YIF
Sbjct: 58  MTPCMVIVMLSYIF 71


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 101 HNLTMEEQGGSSAPRVSDKRLAQTQAKVDEVVGIMR 208
           H LT+ +        + D+RLA  +A  + ++ +M+
Sbjct: 28  HKLTVIDYSLKEDRVIIDRRLAYQEAISEGILAVMK 63


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 141 GAELPPCSSIVKLC 100
           G    PCS+++K C
Sbjct: 174 GCATQPCSALLKAC 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,908
Number of Sequences: 2352
Number of extensions: 2511
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 51
effective length of database: 444,027
effective search space used:  9768594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)