Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_F06
(221 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M36205-1|AAA60604.1| 116|Homo sapiens SYB2 protein. 42 5e-04
BC033870-1|AAH33870.1| 116|Homo sapiens vesicle-associated memb... 42 5e-04
BC019608-1|AAH19608.1| 116|Homo sapiens vesicle-associated memb... 42 5e-04
BC002737-1|AAH02737.3| 116|Homo sapiens vesicle-associated memb... 42 5e-04
AJ225044-1|CAA12385.1| 116|Homo sapiens vesicle associated memb... 42 5e-04
AF135372-1|AAF15551.1| 116|Homo sapiens synaptobrevin 2 protein. 42 5e-04
Z98884-2|CAB63146.1| 100|Homo sapiens vesicle-associated membra... 39 0.003
U64520-1|AAB05814.1| 100|Homo sapiens synaptobrevin-3 protein. 39 0.003
CR542154-1|CAG46951.1| 100|Homo sapiens VAMP3 protein. 39 0.003
CR542145-1|CAG46942.1| 100|Homo sapiens VAMP3 protein. 39 0.003
BT007327-1|AAP35991.1| 100|Homo sapiens vesicle-associated memb... 39 0.003
BC007050-1|AAH07050.1| 100|Homo sapiens vesicle-associated memb... 39 0.003
BC005941-1|AAH05941.1| 100|Homo sapiens vesicle-associated memb... 39 0.003
BC003570-1|AAH03570.1| 100|Homo sapiens vesicle-associated memb... 39 0.003
Z48924-1|CAA88760.1| 118|Homo sapiens Vamp1 protein. 36 0.018
M36200-1|AAA60603.1| 118|Homo sapiens SYB1 protein. 36 0.018
CR542231-1|CAG47027.1| 116|Homo sapiens VAMP1 protein. 36 0.018
CR542214-1|CAG47010.1| 116|Homo sapiens VAMP1 protein. 36 0.018
BC023286-1|AAH23286.1| 117|Homo sapiens vesicle-associated memb... 36 0.018
AF060538-1|AAC28336.1| 116|Homo sapiens vesicle associated memb... 36 0.018
D87445-1|BAA13386.3| 1065|Homo sapiens KIAA0256 protein protein. 29 2.7
BC033001-1|AAH33001.1| 1101|Homo sapiens KIAA0256 protein protein. 29 2.7
>M36205-1|AAA60604.1| 116|Homo sapiens SYB2 protein.
Length = 116
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = +2
Query: 122 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVE 220
+GG AP S++RL QTQA+VDEVV IMRVNV+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVD 51
>BC033870-1|AAH33870.1| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = +2
Query: 122 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVE 220
+GG AP S++RL QTQA+VDEVV IMRVNV+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVD 51
>BC019608-1|AAH19608.1| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = +2
Query: 122 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVE 220
+GG AP S++RL QTQA+VDEVV IMRVNV+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVD 51
>BC002737-1|AAH02737.3| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = +2
Query: 122 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVE 220
+GG AP S++RL QTQA+VDEVV IMRVNV+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVD 51
>AJ225044-1|CAA12385.1| 116|Homo sapiens vesicle associated
membrane protein 2 protein.
Length = 116
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = +2
Query: 122 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVE 220
+GG AP S++RL QTQA+VDEVV IMRVNV+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVD 51
>AF135372-1|AAF15551.1| 116|Homo sapiens synaptobrevin 2 protein.
Length = 116
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = +2
Query: 122 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVE 220
+GG AP S++RL QTQA+VDEVV IMRVNV+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVD 51
>Z98884-2|CAB63146.1| 100|Homo sapiens vesicle-associated membrane
protein 3 (cellubrevin) protein.
Length = 100
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 128 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVE 220
G +A S++RL QTQ +VDEVV IMRVNV+
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVD 34
>U64520-1|AAB05814.1| 100|Homo sapiens synaptobrevin-3 protein.
Length = 100
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 128 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVE 220
G +A S++RL QTQ +VDEVV IMRVNV+
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVD 34
>CR542154-1|CAG46951.1| 100|Homo sapiens VAMP3 protein.
Length = 100
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 128 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVE 220
G +A S++RL QTQ +VDEVV IMRVNV+
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVD 34
>CR542145-1|CAG46942.1| 100|Homo sapiens VAMP3 protein.
Length = 100
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 128 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVE 220
G +A S++RL QTQ +VDEVV IMRVNV+
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVD 34
>BT007327-1|AAP35991.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 128 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVE 220
G +A S++RL QTQ +VDEVV IMRVNV+
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVD 34
>BC007050-1|AAH07050.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 128 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVE 220
G +A S++RL QTQ +VDEVV IMRVNV+
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVD 34
>BC005941-1|AAH05941.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 128 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVE 220
G +A S++RL QTQ +VDEVV IMRVNV+
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVD 34
>BC003570-1|AAH03570.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 128 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVE 220
G +A S++RL QTQ +VDEVV IMRVNV+
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVD 34
>Z48924-1|CAA88760.1| 118|Homo sapiens Vamp1 protein.
Length = 118
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = +2
Query: 125 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVE 220
GG P S++RL QTQA+V+EVV I+RVNV+
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVD 53
>M36200-1|AAA60603.1| 118|Homo sapiens SYB1 protein.
Length = 118
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = +2
Query: 125 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVE 220
GG P S++RL QTQA+V+EVV I+RVNV+
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVD 53
>CR542231-1|CAG47027.1| 116|Homo sapiens VAMP1 protein.
Length = 116
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = +2
Query: 125 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVE 220
GG P S++RL QTQA+V+EVV I+RVNV+
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVD 53
>CR542214-1|CAG47010.1| 116|Homo sapiens VAMP1 protein.
Length = 116
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = +2
Query: 125 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVE 220
GG P S++RL QTQA+V+EVV I+RVNV+
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVD 53
>BC023286-1|AAH23286.1| 117|Homo sapiens vesicle-associated
membrane protein 1 (synaptobrevin 1) protein.
Length = 117
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = +2
Query: 125 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVE 220
GG P S++RL QTQA+V+EVV I+RVNV+
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVD 53
>AF060538-1|AAC28336.1| 116|Homo sapiens vesicle associated
membrane protein-1B protein.
Length = 116
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = +2
Query: 125 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVE 220
GG P S++RL QTQA+V+EVV I+RVNV+
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVD 53
>D87445-1|BAA13386.3| 1065|Homo sapiens KIAA0256 protein protein.
Length = 1065
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 141 GAELPPCSSIVKLCYIFIQELVNIRKLYLYYN*IRKQ 31
G E P S + CY F+QE + R+ LY N IR Q
Sbjct: 53 GVEPTPIPSYLITCYPFVQENQSNRQFPLYNNDIRWQ 89
>BC033001-1|AAH33001.1| 1101|Homo sapiens KIAA0256 protein protein.
Length = 1101
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 141 GAELPPCSSIVKLCYIFIQELVNIRKLYLYYN*IRKQ 31
G E P S + CY F+QE + R+ LY N IR Q
Sbjct: 44 GVEPTPIPSYLITCYPFVQENQSNRQFPLYNNDIRWQ 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,788,190
Number of Sequences: 237096
Number of extensions: 327523
Number of successful extensions: 577
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 76,859,062
effective HSP length: 52
effective length of database: 64,530,070
effective search space used: 1355131470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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