Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_F06
         (221 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   1.0  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   2.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   2.4  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   2.4  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   2.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    20   4.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    19   7.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        19   9.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        19   9.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        19   9.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    19   9.5  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 1.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 118 FHCQIMLYFYTRTSKY 71
           FH Q +LY Y + S Y
Sbjct: 286 FHTQRLLYVYAQESDY 301


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 2.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 84  ELVNIRKLYLYYN 46
           E VNI KLY Y++
Sbjct: 454 ESVNIDKLYTYFD 466


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 2.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 84  ELVNIRKLYLYYN 46
           E VNI KLY Y++
Sbjct: 454 ESVNIDKLYTYFD 466


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 20.6 bits (41), Expect = 2.4
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 86  CIKI*HNLTME-EQGGSSAPRVSDKRL 163
           C    + +T E E+G S   RVSD++L
Sbjct: 12  CALFIYTVTAETEEGQSGRSRVSDEQL 38


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 20.6 bits (41), Expect = 2.4
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 86  CIKI*HNLTME-EQGGSSAPRVSDKRL 163
           C    + +T E E+G S   RVSD++L
Sbjct: 12  CALFIYTVTAETEEGQSGRSRVSDEQL 38


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 19.8 bits (39), Expect = 4.1
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -3

Query: 216 TLTRIMPTTSSTLA*VCAKRLSLTLGAELPPCSSIVKLCYIFIQELVNI 70
           T+  I+P    T   V    L    G ++  CSSI+    +F   L  I
Sbjct: 253 TVNLIIPCVGITFLTVLVFYLPSDSGEKVSLCSSILLSLTVFFLLLAEI 301


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.0 bits (37), Expect = 7.2
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 144 LGAELPPCSSIVKLCY 97
           +G E   C+S  K C+
Sbjct: 433 IGCECKTCNSKTKCCF 448


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 96  YNII*QWKSKEE 131
           YN+I Q ++KEE
Sbjct: 105 YNVIEQVRTKEE 116


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 96  YNII*QWKSKEE 131
           YN+I Q ++KEE
Sbjct: 105 YNVIEQVRTKEE 116


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 96  YNII*QWKSKEE 131
           YN+I Q ++KEE
Sbjct: 105 YNVIEQVRTKEE 116


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 107 NYVIFLYKN 81
           NY IFLY N
Sbjct: 20  NYFIFLYFN 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,270
Number of Sequences: 438
Number of extensions: 793
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3407265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)