Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_F05
         (260 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   1.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   1.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   1.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   1.4  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   1.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   1.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   3.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   3.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   4.4  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        20   5.8  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 162 ETAVMKLGSCDGGATLDSRL 103
           E A    GSC  GA LDS+L
Sbjct: 525 EAADFFSGSCAPGAPLDSKL 544


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 162 ETAVMKLGSCDGGATLDSRL 103
           E A    GSC  GA LDS+L
Sbjct: 525 EAADFFSGSCAPGAPLDSKL 544


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 162 ETAVMKLGSCDGGATLDSRL 103
           E A    GSC  GA LDS+L
Sbjct: 525 EAADFFSGSCAPGAPLDSKL 544


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = -2

Query: 88  RCWRFRNPRPFIRTHVNY-TLYFTSLVP 8
           RC R+R  R  + T  N+   Y+    P
Sbjct: 271 RCLRYRPARAIVETLANFMRFYYNPFTP 298



 Score = 19.8 bits (39), Expect = 5.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 215 LHYTQYPFNP 244
           L YTQ P NP
Sbjct: 86  LQYTQLPVNP 95


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = -2

Query: 88  RCWRFRNPRPFIRTHVNY-TLYFTSLVP 8
           RC R+R  R  + T  N+   Y+    P
Sbjct: 142 RCLRYRPARAIVETLANFMRFYYNPFTP 169


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = -2

Query: 88  RCWRFRNPRPFIRTHVNY-TLYFTSLVP 8
           RC R+R  R  + T  N+   Y+    P
Sbjct: 271 RCLRYRPARAIVETLANFMRFYYNPFTP 298



 Score = 19.8 bits (39), Expect = 5.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 215 LHYTQYPFNP 244
           L YTQ P NP
Sbjct: 86  LQYTQLPVNP 95


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 129  GGATLDSRLP 100
            GGATLD R P
Sbjct: 1628 GGATLDKRRP 1637


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 207 FACYITPSTRSTHFST 254
           F C  TP     HF+T
Sbjct: 193 FVCIATPEAIELHFTT 208


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 98  HGNLLSSVAPPSQLPNFITAVSPTPANLQN 187
           H   LS    P Q P F    SP+ + +++
Sbjct: 555 HRASLSKTPQPPQCPRFRKLDSPSDSGIES 584


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 171 QRIYRITLPSTRFACYITPSTRSTHFS 251
           Q+++    P T  AC  +P+T S   S
Sbjct: 16  QQLFSSANPGTIQACTTSPATASLESS 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,086
Number of Sequences: 438
Number of extensions: 1684
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4762122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)