Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_F04
(214 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 93 4e-20
01_01_1068 - 8413269-8413589,8414011-8414262,8417472-8417603,841... 93 4e-20
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 91 8e-20
06_01_0853 + 6486027-6486158,6486561-6486692,6486974-6486978,648... 73 2e-14
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 38 0.001
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 38 0.001
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 38 0.001
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 38 0.001
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 38 0.001
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 38 0.001
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 37 0.002
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 35 0.008
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 34 0.018
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 33 0.042
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 32 0.073
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 32 0.073
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 29 0.39
06_01_0463 - 3293189-3294340,3294424-3294687,3294904-3295164 28 1.2
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 28 1.2
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 28 1.2
11_06_0718 - 26592786-26593856,26597401-26597451,26597977-265984... 27 2.1
02_02_0265 - 8405936-8406367,8406488-8406940,8407073-8407335,840... 27 2.1
12_01_0652 - 5512187-5512273,5512844-5513950 27 2.7
09_04_0190 - 15443764-15443838,15445360-15445458,15446396-154468... 26 3.6
03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 26 3.6
03_01_0065 + 529200-529438,529770-529929,530217-530299,530398-53... 26 3.6
01_01_0134 - 1224084-1224269,1224578-1224662,1224763-1225050,122... 26 3.6
11_08_0091 - 28303446-28303732,28303825-28304297,28304383-283045... 26 4.8
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 26 4.8
11_04_0359 + 16735204-16735676,16736597-16736647,16736860-167369... 25 6.3
07_01_0129 - 959600-959625,960100-961428,961585-961657,962185-96... 25 6.3
02_05_0176 - 26495475-26495546,26495703-26495800,26496590-264966... 25 6.3
01_06_1171 - 35089719-35090336,35090596-35090715,35090851-350911... 25 6.3
01_05_0502 + 22771428-22771466,22772327-22772430,22773043-227731... 25 6.3
11_06_0706 + 26460400-26462254,26462499-26462562,26462929-264629... 25 8.3
11_06_0697 + 26371193-26371397,26371562-26374254 25 8.3
11_01_0113 + 881806-881996,882831-882921,883140-883255,884489-88... 25 8.3
10_08_0397 + 17571492-17571664,17571875-17572034,17572140-175722... 25 8.3
08_01_0298 - 2406254-2406322,2406444-2406541,2408652-2408769,240... 25 8.3
08_01_0102 - 735359-735370,735371-735455,735531-735616,735697-73... 25 8.3
06_03_1110 - 27676172-27676522,27676608-27676703,27676845-276769... 25 8.3
05_04_0153 + 18536874-18537266,18537369-18537436,18537511-185377... 25 8.3
02_02_0045 - 6327123-6327211,6327616-6327787 25 8.3
01_07_0096 - 41059668-41059886,41059978-41060154,41060575-410607... 25 8.3
01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305 25 8.3
01_01_1182 + 9423610-9424041,9424654-9424721,9424979-9425177,942... 25 8.3
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 92.7 bits (220), Expect = 4e-20
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = +2
Query: 62 MFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
MF++DWF GVL LGLW+K K+LFLGLDNAGKTTLLHMLKD+RLVQH PT
Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 51
>01_01_1068 -
8413269-8413589,8414011-8414262,8417472-8417603,
8417684-8417812
Length = 277
Score = 92.7 bits (220), Expect = 4e-20
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = +2
Query: 62 MFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
MF++DWF GVL LGLW+K K+LFLGLDNAGKTTLLHMLKD+RLVQH PT
Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 51
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 91.5 bits (217), Expect = 8e-20
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 62 MFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
MF+ DWF GVL LGLW+K K+LFLGLDNAGKTTLLHMLKD+RLVQH PT
Sbjct: 1 MFLWDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 51
>06_01_0853 +
6486027-6486158,6486561-6486692,6486974-6486978,
6487948-6488017,6489456-6489776
Length = 219
Score = 73.3 bits (172), Expect = 2e-14
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +2
Query: 65 FILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
F+LDWF VL +GLW+K K+LFLGLDNAGKTTL +ML + L H PT
Sbjct: 3 FLLDWFYDVLASIGLWQKEAKILFLGLDNAGKTTLFYMLSQENLAVHQPT 52
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
KK ++L +GLD AGKTT+L+ LK +V +PT
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
KK ++L +GLD AGKTT+L+ LK +V +PT
Sbjct: 138 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 171
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
KK ++L +GLD AGKTT+L+ LK +V +PT
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
KK ++L +GLD AGKTT+L+ LK +V +PT
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
KK ++L +GLD AGKTT+L+ LK +V +PT
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
KK ++L +GLD AGKTT+L+ LK +V +PT
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 37.1 bits (82), Expect = 0.002
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 116 KSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
+ ++L LGLDNAGKTT+L+ L+ +V +P+
Sbjct: 16 REARILVLGLDNAGKTTILYRLQMGEVVSTIPS 48
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 35.1 bits (77), Expect = 0.008
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 116 KSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
K K+L LGLD AGKTT+L+ L ++ +PT
Sbjct: 15 KEMKVLMLGLDAAGKTTILYRLHIGEVLSSIPT 47
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 33.9 bits (74), Expect = 0.018
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +2
Query: 77 WFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
W + V FL K K++ +GLDNAGKTT L+ L V PT
Sbjct: 4 WMSRVW-FLMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEAVTAAPT 48
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 32.7 bits (71), Expect = 0.042
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 116 KSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
K +++ LGLD AGKTT+L+ L ++ VPT
Sbjct: 16 KEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPT 48
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 31.9 bits (69), Expect = 0.073
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 125 KLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
+++ LGLD AGKTT+L+ L ++ VPT
Sbjct: 19 RVVMLGLDAAGKTTILYKLHIGEVLSTVPT 48
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 31.9 bits (69), Expect = 0.073
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 125 KLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
+++ LGLD AGKTT+L+ L ++ VPT
Sbjct: 19 RVVMLGLDAAGKTTILYRLHMGEVLSTVPT 48
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 29.5 bits (63), Expect = 0.39
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = +2
Query: 104 GLWK-----KSGKLLFLGLDNAGKTTLLHMLK 184
GLWK +L LG+D AGKTTLL +K
Sbjct: 7 GLWKYIFNKTEFHVLILGVDKAGKTTLLEKIK 38
>06_01_0463 - 3293189-3294340,3294424-3294687,3294904-3295164
Length = 558
Score = 27.9 bits (59), Expect = 1.2
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = -2
Query: 210 GTCWTSLSSFNMCSSVVLPAL-SRPRNRSL--PDFFQRP-RNPRTPVNQSKINILNLEGM 43
G ++ L +F S+ +L + + P+ S+ P+ ++R N RT N S+ ILN EGM
Sbjct: 102 GLPYSGLYTFFFDSNNILSIIYNGPKTSSIYWPNPYERSWENGRTTYNSSQYGILNQEGM 161
Query: 42 RL 37
L
Sbjct: 162 FL 163
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 43 HTFQIQYVYLGLVHWCPWIPWSLEKVRQTSVP 138
H F ++V+L + PWIPW T+ P
Sbjct: 3548 HIFDERWVHLAVEKKSPWIPWDNNANSSTAGP 3579
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 27.9 bits (59), Expect = 1.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLL 172
+K ++L +GLDN+GKTT++
Sbjct: 14 EKEMRILMVGLDNSGKTTIV 33
>11_06_0718 -
26592786-26593856,26597401-26597451,26597977-26598423,
26599748-26599815,26599965-26600052
Length = 574
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 118 LFPKTKESKDTSEPIQDKHIESGRYEITII 29
L PK+ + + +P+ K I+SG YE +I
Sbjct: 333 LKPKSSDKQQQQQPVLIKSIDSGGYESQVI 362
>02_02_0265 -
8405936-8406367,8406488-8406940,8407073-8407335,
8407445-8407751
Length = 484
Score = 27.1 bits (57), Expect = 2.1
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = -2
Query: 135 NRSLPDFFQRPRNPR-TPVNQSKINILNLEGM---RLRLFQHILYLP 7
N S D++ PR R T +N K ILNL GM R+ L+Q+ L P
Sbjct: 302 NPSRADYYN-PRAGRITLLNNQKFPILNLIGMGAARVNLYQNALLSP 347
>12_01_0652 - 5512187-5512273,5512844-5513950
Length = 397
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 86 GVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRL 196
G G LG+W G+ AGKTTLL + +D R+
Sbjct: 203 GAPGVLGVW---------GMGGAGKTTLLKLARDPRV 230
>09_04_0190 -
15443764-15443838,15445360-15445458,15446396-15446891,
15449436-15449479,15449999-15450104,15450243-15450314,
15450474-15450588,15451182-15451407
Length = 410
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 171 SSVVLPALSRPRNRSLPDFFQRPRNPRTPVNQSKINILNLEGM 43
S ++ ALS P + PD +RP +P TP +N+ L G+
Sbjct: 228 SPILHRALSWPASPIYPDRCRRPHHPSTPC--LHVNLHRLPGL 268
>03_02_0046 -
5255513-5255630,5255715-5255876,5256579-5256733,
5256811-5256892,5257790-5257827
Length = 184
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +2
Query: 110 WKKSGKLLFLGLDNAGKTTLLHML 181
+K+ +L +GL NAGKT+L++++
Sbjct: 16 FKQEMELSLIGLQNAGKTSLVNVI 39
>03_01_0065 +
529200-529438,529770-529929,530217-530299,530398-530488,
530585-530680,531107-531220,531325-531408,531493-531648,
531755-531829,532172-532278,532361-532544,532970-533158,
533372-533452,533794-533925,534302-534355,534484-534809,
534925-535030,535491-535640,535763-535909
Length = 857
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 45 YLPDSICLSWIGSLVSLDSLVFGK 116
YLP +C+S +G VS D V K
Sbjct: 813 YLPSGVCMSGMGRHVSFDQAVAWK 836
>01_01_0134 -
1224084-1224269,1224578-1224662,1224763-1225050,
1225114-1225334,1225511-1225642,1226218-1226494,
1226722-1226770,1226993-1227088,1227779-1227911,
1228241-1228391,1228484-1228674,1229167-1229382
Length = 674
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +2
Query: 116 KSGKLLFL-GLDNAGKTTLLHML 181
KSG+LL L G +GKTTLL++L
Sbjct: 85 KSGRLLALMGPSGSGKTTLLNVL 107
>11_08_0091 -
28303446-28303732,28303825-28304297,28304383-28304574,
28304688-28304986,28305086-28305121
Length = 428
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 177 MCSSVVLPALSRPRNRSLPDFFQRPRNPRTPV 82
M ++ ++ P N LP + + NPR P+
Sbjct: 240 MVNATLMNIADNPTNVQLPGMYNKEDNPRVPI 271
>03_01_0270 -
2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 163 SLASII*TQEQKFA*LFPKTKESKDTSEPIQDKHIESGR 47
S+ I+ +E+K A KTKE + + + H+ESGR
Sbjct: 27 SIQDIMSRREKKTASEAKKTKEGLEENSNGKSNHLESGR 65
>11_04_0359 +
16735204-16735676,16736597-16736647,16736860-16736934,
16737011-16737062,16737147-16737280,16737397-16737511,
16737665-16737751,16737855-16737903,16738351-16738435,
16738641-16738715,16738848-16739029,16739905-16739969
Length = 480
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 101 LGLWKKSGKLLFLGLDNAGKTTLLHML 181
L L +KS LLF G +GKTTLL +L
Sbjct: 194 LNLKEKSFGLLF-GRSGSGKTTLLQLL 219
>07_01_0129 -
959600-959625,960100-961428,961585-961657,962185-962226
Length = 489
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 122 GKLLFLGLDNAGKTTLL-HMLKDDRLVQH 205
G L +G +N GK+TL+ H D+R+ H
Sbjct: 224 GILPIIGPENVGKSTLIEHACDDERVRNH 252
>02_05_0176 -
26495475-26495546,26495703-26495800,26496590-26496691,
26496944-26496999,26497082-26497245,26497925-26497995,
26498764-26498831,26499400-26499527
Length = 252
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 44 IPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDD 190
+P F ++ F + L ++ K+GK LFL ++ GK LL + DD
Sbjct: 90 VPFLFGFTAIETFASYIIHL-IFGKTGKHLFLMDNDDGKPPLLLRMVDD 137
>01_06_1171 -
35089719-35090336,35090596-35090715,35090851-35091108,
35091934-35092563
Length = 541
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 90 SLDSLVFGKSQANFCSW 140
SLD L+FG+S F W
Sbjct: 256 SLDKLLFGRSDGRFMDW 272
>01_05_0502 +
22771428-22771466,22772327-22772430,22773043-22773129,
22773212-22773287,22773393-22773467,22773639-22773692,
22773745-22773918,22774002-22774061,22774135-22774251,
22774448-22774542,22774811-22775013,22775177-22775274,
22775451-22775587,22776154-22776219,22776300-22776465,
22776537-22776659,22776763-22776845,22776943-22777084,
22777334-22777363,22777587-22777657,22777742-22778333
Length = 863
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 132 RSLPDFFQRPRNPRTPVNQSKINILNLEGMRLRLFQHIL 16
RS+ FF+ P N + I + LEG R L +H+L
Sbjct: 455 RSVDLFFEYPYNNFLHHHVENIIVSCLEGKRTELVEHVL 493
>11_06_0706 +
26460400-26462254,26462499-26462562,26462929-26462981,
26464400-26464401,26464528-26464598,26464938-26465020,
26465065-26465126
Length = 729
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQ 202
+K KL +G GKTTL + +DR ++
Sbjct: 192 RKLYKLAIVGTGGVGKTTLAQKIYNDRKIK 221
>11_06_0697 + 26371193-26371397,26371562-26374254
Length = 965
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQ 202
+K KL +G GKTTL + +DR ++
Sbjct: 143 RKLYKLAIVGTGGVGKTTLAQKIYNDRKIK 172
>11_01_0113 +
881806-881996,882831-882921,883140-883255,884489-885260
Length = 389
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 144 RPRNRSLPDFFQRPRNPRTP 85
RP RS P R R PR+P
Sbjct: 27 RPATRSAPSILWRRRRPRSP 46
>10_08_0397 +
17571492-17571664,17571875-17572034,17572140-17572222,
17572333-17572468,17572515-17572610,17573105-17573218,
17573322-17573405,17573493-17573648,17573744-17573818,
17574318-17574424,17574508-17574688,17574832-17575020,
17575397-17575477,17575621-17575755,17576007-17576329,
17576503-17576608,17576734-17576883,17577034-17577180
Length = 831
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 45 YLPDSICLSWIGSLVSLDSLVFGK 116
YLP +CLS +G VS + V K
Sbjct: 787 YLPGGVCLSGMGRHVSFEQAVAWK 810
>08_01_0298 -
2406254-2406322,2406444-2406541,2408652-2408769,
2408890-2408980,2409243-2409406,2410027-2410242,
2410405-2410475,2410552-2410619,2412027-2412166
Length = 344
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 38 NLIPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDD 190
N +P F ++ F + +++++GK LFL D+ G+ LL + +D
Sbjct: 164 NQVPLLFGSIAMENFASRVVHW-IFRRTGKHLFLTDDDEGEPPLLQRMAED 213
>08_01_0102 -
735359-735370,735371-735455,735531-735616,735697-735779,
736790-737048,737132-737300,738554-738698,738782-739004
Length = 353
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 213 VGTCWTSLSSFNMCSSVVLPALSRPRNRSLPD 118
+GT F+ C +LP+L+R R LP+
Sbjct: 295 IGTLVILFCIFHACVGFILPSLARLRTMYLPN 326
>06_03_1110 -
27676172-27676522,27676608-27676703,27676845-27676976,
27677518-27677622,27677946-27678119,27678361-27678430,
27678515-27678696,27678974-27679083,27679360-27679464,
27679570-27679648,27679808-27679848,27679931-27680009,
27680364-27680492
Length = 550
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 80 FTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHV 208
F+G+ GFLG+ +L+L K T L +L+ D V+ V
Sbjct: 474 FSGIFGFLGMLIYMAAILYLVFRKNRKAT-LPLLEGDSTVRIV 515
>05_04_0153 +
18536874-18537266,18537369-18537436,18537511-18537721,
18537918-18538036,18538103-18538172,18538260-18538331,
18538472-18538585,18540633-18540698
Length = 370
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 140 GLDNAGKTTLLHMLKDDRLVQHVPT 214
G D G T +LH K D L+ +PT
Sbjct: 95 GSDMGGFTRILHSGKPDGLMDEIPT 119
>02_02_0045 - 6327123-6327211,6327616-6327787
Length = 86
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -2
Query: 201 WTSLSSFNMCSSVVLPALSRPRNRSLPDFFQRPRNPRTPVNQSKIN 64
W + +S +C P P LPD + P +P PV+ N
Sbjct: 21 WLAATSGCLCRRPPTPIAGVPSPPILPDGDRTPESPPAPVSAKHPN 66
>01_07_0096 -
41059668-41059886,41059978-41060154,41060575-41060778,
41060874-41061089,41061698-41061961,41062413-41062654,
41062728-41062851,41062852-41062991,41063349-41063397,
41063735-41063891,41063982-41064130,41064267-41064299,
41064497-41064575,41064961-41065040,41065438-41065560
Length = 751
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 49 FQIQYVYLGLVHWCPWIPWSLEKVRQTSVP 138
+ +Q+ Y V W PW + EK R+ VP
Sbjct: 33 YLLQHAY-NPVDWYPWGEEAFEKARRKDVP 61
>01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305
Length = 396
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 177 MCSSVVLPALSRPRNRSLPDFFQRPRNPRTPV 82
M ++ V+ L RPR +P+F P +P T V
Sbjct: 1 MATASVVTYLQRPRELPVPEFRAPPPSPVTGV 32
>01_01_1182 +
9423610-9424041,9424654-9424721,9424979-9425177,
9425349-9425446,9425539-9425608,9425948-9426061,
9427686-9427751
Length = 348
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 110 WKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
W K + G D G T +LH K D L+ +PT
Sbjct: 98 WYKRMQARPEGADMGGFTRVLHSGKPDALMGEIPT 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,489,667
Number of Sequences: 37544
Number of extensions: 118244
Number of successful extensions: 450
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 50
effective length of database: 12,916,148
effective search space used: 258322960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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