Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_F04
(214 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 89 5e-19
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 42 8e-05
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 38 7e-04
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 38 0.001
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 37 0.002
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 37 0.002
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 37 0.002
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 36 0.004
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 36 0.004
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 33 0.037
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 33 0.037
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 32 0.064
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 32 0.064
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 31 0.11
U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical p... 30 0.26
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 30 0.26
Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical pr... 28 1.0
U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical pr... 27 1.4
AF040650-6|AAB95007.2| 325|Caenorhabditis elegans Hypothetical ... 27 1.4
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 27 2.4
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 26 3.2
AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical ... 26 3.2
Z35640-5|CAO82046.1| 689|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 25 5.5
Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical p... 25 5.5
Z49907-8|CAN99663.1| 499|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z49907-7|CAA90088.1| 497|Caenorhabditis elegans Hypothetical pr... 25 5.5
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 25 5.5
AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical ... 25 5.5
AC024753-4|AAL77191.1| 197|Caenorhabditis elegans Hypothetical ... 25 5.5
AC024753-3|AAK68428.1| 212|Caenorhabditis elegans Hypothetical ... 25 5.5
U55857-1|AAA98026.1| 394|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical pr... 25 9.7
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 25 9.7
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 25 9.7
AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical ... 25 9.7
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 88.6 bits (210), Expect = 5e-19
Identities = 39/50 (78%), Positives = 42/50 (84%)
Frame = +2
Query: 65 FILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
F+ DWF GVL LGL K GKL+FLGLDNAGKTTLLHMLKDDR+ QHVPT
Sbjct: 3 FLWDWFNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPT 52
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 41.5 bits (93), Expect = 8e-05
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +2
Query: 71 LDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLK--DDRLVQHVPT 214
+ +F+ + GL KK ++ +GLDN+GKTT+L+ LK + R Q VPT
Sbjct: 1 MGFFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPT 50
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 38.3 bits (85), Expect = 7e-04
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 98 FLGLW-KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
F GL+ K+ ++L +GLD AGKTT+L+ LK +V +PT
Sbjct: 9 FKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 37.5 bits (83), Expect = 0.001
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
KK ++L LGLD AGKTT+L+ LK + V +PT
Sbjct: 11 KKELRILMLGLDAAGKTTILYKLKLGQSVTTIPT 44
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 68 ILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
++ +F G+ G + ++L LGLD AGKTT+L+ L+ +V +PT
Sbjct: 4 VMSYFRGLFG-----AREMRILILGLDGAGKTTILYRLQVGEVVTTIPT 47
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 36.7 bits (81), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
K+ ++L +GLD AGKTT+L+ LK +V +PT
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 36.7 bits (81), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
K+ ++L +GLD AGKTT+L+ LK +V +PT
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 35.9 bits (79), Expect = 0.004
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +2
Query: 125 KLLFLGLDNAGKTTLLHMLKDDRLVQHV-PT 214
++L LGLDNAGKTT+L L + VQHV PT
Sbjct: 19 RILLLGLDNAGKTTILKQLSSED-VQHVTPT 48
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 35.9 bits (79), Expect = 0.004
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 125 KLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
+ L LGLD AGKTT+L+ LK + V +PT
Sbjct: 19 RTLMLGLDGAGKTTILYKLKLNETVNTIPT 48
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 32.7 bits (71), Expect = 0.037
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 68 ILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQH-VPT 214
+LDW + WK+ +L +GL N+GKTT ++++ + + +PT
Sbjct: 8 VLDWIRSLF-----WKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPT 52
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 32.7 bits (71), Expect = 0.037
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 68 ILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQH-VPT 214
+LDW + WK+ +L +GL N+GKTT ++++ + + +PT
Sbjct: 8 VLDWIRSLF-----WKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPT 52
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 31.9 bits (69), Expect = 0.064
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 125 KLLFLGLDNAGKTTLLHMLKDD 190
++L LGLDNAGKTTL+ D+
Sbjct: 18 RILILGLDNAGKTTLMKKFLDE 39
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 31.9 bits (69), Expect = 0.064
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 116 KSGKLLFLGLDNAGKTTLLHMLKDDRLVQHVPT 214
K K++ +GLDNAGKTT+L+ V+ PT
Sbjct: 16 KKYKIIVVGLDNAGKTTILYNYVTKDQVETKPT 48
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 31.1 bits (67), Expect = 0.11
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 162 VLPALSRPRNRSLPDFFQRPRNPRTP 85
+LP + PR S+P FF P++P P
Sbjct: 466 ILPTFATPRPLSIPSFFTTPQSPHRP 491
>U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical
protein T26A5.1 protein.
Length = 613
Score = 29.9 bits (64), Expect = 0.26
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +2
Query: 110 WKKSGKLLFL-GLDNAGKTTLLHML 181
+ KSG+LL L G AGKTTLL+ML
Sbjct: 57 YAKSGELLALMGASGAGKTTLLNML 81
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 29.9 bits (64), Expect = 0.26
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = +2
Query: 104 GLWKKSGK-----LLFLGLDNAGKTTLLHMLK 184
G+W+K K ++ +GLDNAGKTT L K
Sbjct: 7 GIWEKFFKKKDYYVVIVGLDNAGKTTFLEQTK 38
>Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical
protein T28F3.6 protein.
Length = 252
Score = 27.9 bits (59), Expect = 1.0
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 113 KKSGKLLFLGLDNAGKTTLLHMLKD 187
KK K+L LG AGKTTL L D
Sbjct: 26 KKVAKILVLGPPKAGKTTLCTFLAD 50
>U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical
protein C05D10.3 protein.
Length = 598
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 116 KSGKLL-FLGLDNAGKTTLLHMLKDDRL 196
+SGKLL LG AGKTTL+++L L
Sbjct: 18 ESGKLLAILGSSGAGKTTLMNVLTSRNL 45
>Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical
protein C10C6.5 protein.
Length = 610
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/23 (65%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = +2
Query: 116 KSGKLLFL-GLDNAGKTTLLHML 181
K G+LL L G AGKTTLL+ML
Sbjct: 59 KPGQLLALMGASGAGKTTLLNML 81
>AF040650-6|AAB95007.2| 325|Caenorhabditis elegans Hypothetical
protein T04B8.1 protein.
Length = 325
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -2
Query: 195 SLSSFNMCSSVVLPALSRPRNRSLPDFFQRPRNPRTPVNQSKINILNLEGM 43
S S+N S A R + P QRP +P+ QS ++ N+E M
Sbjct: 271 SWPSYNPPSFASFSAAPRAKYHCTPSLNQRPEDPQNIQRQSFFSLKNVEYM 321
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 119 SGKLLFLGLDNAGKTTLLHMLKDD 190
+ ++ +G + AGKTTLL +L DD
Sbjct: 523 NSRICIVGENGAGKTTLLKLLLDD 546
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 125 KLLFLGLDNAGKTTLLHMLK 184
+++ LGLD AGKT+++ LK
Sbjct: 371 RVVLLGLDGAGKTSIVRRLK 390
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 156 PALSRPRNRSLPDFFQRPRNPRTPVNQSKINILNLEGMRLRLF 28
P + R R + +P +R R P TP + +K+ E RLF
Sbjct: 1067 PLMERQRKQKIPKISKRHRKPETP-DDTKLVHFTTEYTPKRLF 1108
>AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical
protein Y71H2B.7 protein.
Length = 406
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +2
Query: 113 KKSGKLL---FLGLDNAGKTTLLHMLK 184
KK G ++ LG++ AGKTT++ LK
Sbjct: 27 KKEGDIIHFFMLGIEGAGKTTIVRQLK 53
>Z35640-5|CAO82046.1| 689|Caenorhabditis elegans Hypothetical
protein F43D9.3b protein.
Length = 689
Score = 25.8 bits (54), Expect = 4.2
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 38 NLIPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLH 175
NL SR N+F +D GV +GL + S LL +G +A T+LH
Sbjct: 254 NLRDSRNNLFTMD---GVR--MGLLQTSRPLLVIGDRSADLATMLH 294
>Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical
protein F43D9.3a protein.
Length = 707
Score = 25.8 bits (54), Expect = 4.2
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 38 NLIPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLH 175
NL SR N+F +D GV +GL + S LL +G +A T+LH
Sbjct: 254 NLRDSRNNLFTMD---GVR--MGLLQTSRPLLVIGDRSADLATMLH 294
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 102 RNPRTPVNQSKINILNLEGMRLRLFQ 25
RNP +NQS+I I+ G+ +R+F+
Sbjct: 968 RNPLQNMNQSEIVIMLKSGVGIRIFE 993
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 25.4 bits (53), Expect = 5.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 56 FNMFILDWFTGVLGFLGLWKKSGKLLFLGLD-NAGKTTLLHMLKD 187
F MFI+DWF+ ++ F LL D N G +T H K+
Sbjct: 675 FVMFIIDWFSALVTFFCFGAIFMYLLHRKPDVNWGSSTQAHSYKN 719
>Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 25.4 bits (53), Expect = 5.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 56 FNMFILDWFTGVLGFLGLWKKSGKLLFLGLD-NAGKTTLLHMLKD 187
F MFI+DWF+ ++ F LL D N G +T H K+
Sbjct: 675 FVMFIIDWFSALVTFFCFGAIFMYLLHRKPDVNWGSSTQAHSYKN 719
>Z49907-8|CAN99663.1| 499|Caenorhabditis elegans Hypothetical
protein B0491.6b protein.
Length = 499
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 103 WSLEKVRQTSVPGSR*CWQDYTTAHVER*QTGPACS 210
+ L++ TS+ R WQ+Y HV + AC+
Sbjct: 405 YELQRENDTSLQEKRKFWQEYRKTHVPPKRERKACA 440
>Z49907-7|CAA90088.1| 497|Caenorhabditis elegans Hypothetical
protein B0491.6a protein.
Length = 497
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 103 WSLEKVRQTSVPGSR*CWQDYTTAHVER*QTGPACS 210
+ L++ TS+ R WQ+Y HV + AC+
Sbjct: 403 YELQRENDTSLQEKRKFWQEYRKTHVPPKRERKACA 438
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 25.4 bits (53), Expect = 5.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 56 FNMFILDWFTGVLGFLGLWKKSGKLLFLGLD-NAGKTTLLHMLKD 187
F MFI+DWF+ ++ F LL D N G +T H K+
Sbjct: 675 FVMFIIDWFSALVTFFCFGAIFMYLLHRKPDVNWGSSTQAHSYKN 719
>AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 25.4 bits (53), Expect = 5.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 56 FNMFILDWFTGVLGFLGLWKKSGKLLFLGLD-NAGKTTLLHMLKD 187
F MFI+DWF+ ++ F LL D N G +T H K+
Sbjct: 675 FVMFIIDWFSALVTFFCFGAIFMYLLHRKPDVNWGSSTQAHSYKN 719
>AC024753-4|AAL77191.1| 197|Caenorhabditis elegans Hypothetical
protein Y23H5B.7b protein.
Length = 197
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 32 NRNLIPSRFNMFILDWFTGVL 94
N N P R N FI +W G +
Sbjct: 110 NHNFTPLRINQFIHNWMLGAM 130
>AC024753-3|AAK68428.1| 212|Caenorhabditis elegans Hypothetical
protein Y23H5B.7a protein.
Length = 212
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 32 NRNLIPSRFNMFILDWFTGVL 94
N N P R N FI +W G +
Sbjct: 110 NHNFTPLRINQFIHNWMLGAM 130
>U55857-1|AAA98026.1| 394|Caenorhabditis elegans Hypothetical
protein K08D10.10 protein.
Length = 394
Score = 25.0 bits (52), Expect = 7.3
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 58 QYVYLGLVHWCPW 96
QYVY+G+ +W P+
Sbjct: 380 QYVYIGIAYWPPY 392
>Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical
protein Y49E10.9 protein.
Length = 454
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = +2
Query: 119 SGKLLFL-GLDNAGKTTLLHML 181
+G+L F+ G AGKTTLL++L
Sbjct: 131 AGELTFIMGSSGAGKTTLLNVL 152
>Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical
protein F19B6.4 protein.
Length = 695
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = +2
Query: 116 KSGKLLFL-GLDNAGKTTLLHML 181
+ G+L F+ G AGKTTLL++L
Sbjct: 127 RPGELTFIMGSSGAGKTTLLNIL 149
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 125 KLLFLGLDNAGKTTLLHMLKDD 190
KLL +G GKT +L+ DD
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDD 32
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 125 KLLFLGLDNAGKTTLLHMLKDD 190
KLL +G GKT +L+ DD
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDD 32
>AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical
protein Y40C7B.5 protein.
Length = 610
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -2
Query: 138 RNRSLPDFFQRPRNPRTPVNQSKINILNLEGMRLRLFQHIL 16
RN+ + F + R + +Q + ++ N+E R+ +F+ IL
Sbjct: 13 RNKIVQSFLKNRREHKFKNSQERTDLENIEDHRIDVFKPIL 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,624,736
Number of Sequences: 27780
Number of extensions: 105953
Number of successful extensions: 432
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,740,198
effective HSP length: 50
effective length of database: 11,351,198
effective search space used: 227023960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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