Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_F04
(214 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 0.72
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 0.72
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 0.72
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 0.95
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 0.95
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 0.95
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 0.95
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 0.95
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 0.95
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 0.95
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 0.95
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 21 1.7
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 19 5.1
EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein. 19 5.1
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 19 5.1
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 19 5.1
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 19 6.7
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 19 6.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 19 6.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 19 6.7
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 19 8.9
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 19 8.9
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 0.72
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +1
Query: 76 LVHWCPWIPWSLEKVR 123
++ WC W LEK +
Sbjct: 385 IIRWCTWSEGDLEKCK 400
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 0.72
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +1
Query: 76 LVHWCPWIPWSLEKVR 123
++ WC W LEK +
Sbjct: 385 IIRWCTWSEGDLEKCK 400
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 0.72
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +1
Query: 76 LVHWCPWIPWSLEKVR 123
++ WC W LEK +
Sbjct: 385 IIRWCTWSEGDLEKCK 400
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 0.95
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +2
Query: 32 NRNLIPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHV 208
+R ++PS M L W +L KK K LG + K L L+ +V
Sbjct: 287 DRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQEKSSKSLLANV 345
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 0.95
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +2
Query: 32 NRNLIPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHV 208
+R ++PS M L W +L KK K LG + K L L+ +V
Sbjct: 287 DRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQEKSSKSLLANV 345
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 0.95
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +2
Query: 32 NRNLIPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHV 208
+R ++PS M L W +L KK K LG + K L L+ +V
Sbjct: 287 DRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQEKSSKSLLANV 345
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 0.95
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +2
Query: 32 NRNLIPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHV 208
+R ++PS M L W +L KK K LG + K L L+ +V
Sbjct: 287 DRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQEKSSKSLLANV 345
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 0.95
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +2
Query: 32 NRNLIPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHV 208
+R ++PS M L W +L KK K LG + K L L+ +V
Sbjct: 287 DRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQEKSSKSLLANV 345
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 0.95
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +2
Query: 32 NRNLIPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHV 208
+R ++PS M L W +L KK K LG + K L L+ +V
Sbjct: 287 DRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQEKSSKSLLANV 345
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 0.95
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +2
Query: 32 NRNLIPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHV 208
+R ++PS M L W +L KK K LG + K L L+ +V
Sbjct: 355 DRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQEKSSKSLLANV 413
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 0.95
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +2
Query: 32 NRNLIPSRFNMFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQHV 208
+R ++PS M L W +L KK K LG + K L L+ +V
Sbjct: 355 DRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQEKSSKSLLANV 413
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.0 bits (42), Expect = 1.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 98 FLGLWKKSGKLLFLGLDNAGKTTL 169
F+ +K GK+L L + AGK+ +
Sbjct: 127 FVADYKIEGKVLLLPVRGAGKSNI 150
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 19.4 bits (38), Expect = 5.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 103 WSLEKVRQTSVPGS 144
WS +V+ +VPGS
Sbjct: 908 WSNSQVQGVAVPGS 921
>EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein.
Length = 200
Score = 19.4 bits (38), Expect = 5.1
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 115 FPKTKESKDTSEPIQDKH 62
+P T SK+T + + D H
Sbjct: 151 YPLTGMSKETQQKLIDDH 168
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 19.4 bits (38), Expect = 5.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 107 LWKKSGKLLFLGLDNAGKTTLLHMLKDDRLVQ 202
L K+ + +G + GKTTLL L++ + +
Sbjct: 141 LIKRHPIVTIMGHVDHGKTTLLDALRNTSIAK 172
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 19.4 bits (38), Expect = 5.1
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 115 FPKTKESKDTSEPIQDKH 62
+P T SK+T + + D H
Sbjct: 167 YPLTGMSKETQQKLIDDH 184
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 19.0 bits (37), Expect = 6.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 158 CQHYLDPGTEV 126
C+HYLD + V
Sbjct: 574 CRHYLDAKSSV 584
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 19.0 bits (37), Expect = 6.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 129 SLPDFFQRPRNPRTPVN 79
S F + P+N TPVN
Sbjct: 53 SFKTFDKGPKNYTTPVN 69
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 19.0 bits (37), Expect = 6.7
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +2
Query: 44 IPSRFNMFILDWFTGVLGFL 103
+P ++ + W++ VLG+L
Sbjct: 515 VPVKYLTYEYPWWSHVLGWL 534
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 19.0 bits (37), Expect = 6.7
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +2
Query: 44 IPSRFNMFILDWFTGVLGFL 103
+P ++ + W++ VLG+L
Sbjct: 568 VPVKYLTYEYPWWSHVLGWL 587
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 18.6 bits (36), Expect = 8.9
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 53 WKV*DYDYFN 24
WK DYD+ N
Sbjct: 42 WKYLDYDFDN 51
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 18.6 bits (36), Expect = 8.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 92 LGFLGLWKKSGKL 130
LGFL W+ S L
Sbjct: 9 LGFLLFWQNSASL 21
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,615
Number of Sequences: 438
Number of extensions: 1355
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 3165825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
- SilkBase 1999-2023 -