Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_F03
(512 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 42 7e-05
SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyc... 38 9e-04
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 36 0.005
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 32 0.058
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 31 0.077
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 31 0.10
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.18
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 0.31
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 29 0.31
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.31
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 29 0.41
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 29 0.41
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 0.54
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 29 0.54
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 28 0.71
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 0.94
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.2
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 1.2
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 27 1.6
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 27 1.6
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 1.6
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 27 1.6
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 2.2
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 27 2.2
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 2.2
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 27 2.2
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 26 2.9
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 26 2.9
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 3.8
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 26 3.8
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 3.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 3.8
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 26 3.8
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 3.8
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 5.0
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 25 5.0
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 6.7
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 25 6.7
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 6.7
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 6.7
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 8.8
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 25 8.8
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 8.8
SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2 ... 25 8.8
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 41.5 bits (93), Expect = 7e-05
Identities = 34/107 (31%), Positives = 55/107 (51%)
Frame = +2
Query: 17 QDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 196
+DF+K I + A +NS + E LKE S + ++ EL+N L+ + + K E
Sbjct: 458 KDFEK-IEQDLRACLNSSSNE-----LKEKSALIDKKDQELNN-LREQIKEQK-KVSEST 509
Query: 197 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLA 337
Q + Q+L+R + + +K H E Q L +LQT I N+ S L+
Sbjct: 510 QSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLS 556
Score = 30.3 bits (65), Expect = 0.18
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = +2
Query: 74 TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP 253
TE+++ +L+EG + ++++ELS+ L+ A K K L Q + R ED+ K
Sbjct: 1361 TENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATNKLKNQLDHLNQEI-RLKEDVLK--- 1414
Query: 254 DVEKQATALHEKL--QTAIQNTLKESQNLAKEVGVNMDQTSQK 376
+ E +L E L Q +++L +++N E+ +D TS+K
Sbjct: 1415 EKESLIISLEESLSNQRQKESSLLDAKN---ELEHMLDDTSRK 1454
>SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 37.9 bits (84), Expect = 9e-04
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 13/140 (9%)
Frame = +2
Query: 5 EEHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELS---------NSLQG 157
E H QD T + A + S T+SLN+A + V QV+E S N LQ
Sbjct: 177 EGHYQDPAATENNFATAALISNETDSLNQATLAVPEEPVIQVTEASVPSFVSQQENQLQD 236
Query: 158 ALTDANGKAKEVLQQARQNLERTVED----LRKAHPDVEKQATALHEKLQTAIQNTLKES 325
+N K + + + N+ + + + HPDV+ QA+ + +T +
Sbjct: 237 EALTSNSKNADAIGASDANVATAPKSWADLIARNHPDVKSQAS---------VSSTASTT 287
Query: 326 QNLAKEVGVNMDQTSQKLAP 385
K GVN DQT Q AP
Sbjct: 288 GQTVK--GVNADQTQQPTAP 305
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 35.5 bits (78), Expect = 0.005
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Frame = +2
Query: 77 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP- 253
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR+
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLREHQTL 879
Query: 254 --DVEKQATALHE--KLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKH 421
++ T L + LQ ++N L+ KE M++ + L KL AA D ++
Sbjct: 880 VLQLQSNITELKQDITLQRTVRNQLEIQTTELKERLKFMEERQENLQSKLIAANKDTTQN 939
Query: 422 AEEVQ 436
+ V+
Sbjct: 940 PDNVE 944
Score = 24.6 bits (51), Expect = 8.8
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Frame = +2
Query: 68 KNTESLNKALKEGSDSMVQQVSELS--NSLQGALTDANGKAKEVLQQARQNLERT----V 229
K E LN +L + + +E+ + + + N + K Q ER +
Sbjct: 1295 KEVEKLNASLNPLQTEINELKAEIGAKTASLNLMKEYNSRWKLRFQSVLNKYERVDPTQL 1354
Query: 230 EDLRKAHPDVEKQATALHEKLQTAIQ--NTLKESQNLAKEVGVNMDQTSQKLAPK---LK 394
E+L+K +EK+ L KLQ + +T K+ N E N+ + ++ K L
Sbjct: 1355 EELKKNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLA 1414
Query: 395 AAYDD 409
AA+++
Sbjct: 1415 AAWNE 1419
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 31.9 bits (69), Expect = 0.058
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Frame = +2
Query: 38 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD------ANGKAKEV-- 193
+EQF+ + + N + + G + + ++++ N +G + A K KE+
Sbjct: 189 NEQFSRALEALNDFVVPPLYEGGPSTRLSLITDVEN--EGLYREWQTSRYARNKQKEINI 246
Query: 194 LQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQNTLKESQ---NLAKEVGVNM 358
LQQ R NLER +D+ +E+ A EK + +QN +K S+ N A G+N
Sbjct: 247 LQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN-VKTSEIPINAADLEGIN- 304
Query: 359 DQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAAT 460
+ + ++++ D E Q+ E A+
Sbjct: 305 PELLPVIEEEIRSFRDQSAMKKREKQRSKDEYAS 338
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 31.5 bits (68), Expect = 0.077
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 12/101 (11%)
Frame = +2
Query: 44 QFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGA------------LTDANGKAK 187
QF A N+K E + +EG D+ +QVS L L+ A A K
Sbjct: 99 QFEATENAKRKEEIEAQYREGYDTAQKQVSSLVRFLRFASHNCVHPSDDAPFNSAVEKLL 158
Query: 188 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQN 310
++ + + E+ V DL + DV ++ + + + + N
Sbjct: 159 VIVYEGTEKSEKAVADLNDSSTDVVPESEVSFQTISSRVDN 199
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 31.1 bits (67), Expect = 0.10
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Frame = +2
Query: 179 KAKEVLQ---QARQNLERTVEDLRK---AHPD-VEKQATALHEKLQTAIQNTLKESQNLA 337
K KE ++ Q ++ LER VE+LRK + D VE +A + + + E Q L
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187
Query: 338 KEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAA 457
K++ T QKL K++ + H ++Q +E+A
Sbjct: 188 KDMEQENASTIQKLTSKIRELQASQLDH--DLQASQNESA 225
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 0.18
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = +2
Query: 95 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRKAHPDVEK 265
+ + S++ V + E + L L+ K+ L++ +Q L EDLRK D EK
Sbjct: 1005 ITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEK 1064
Query: 266 Q------ATALHEKLQTAIQNTLKESQNLAKEVGV 352
+ A + +KL+ L++ ++L KE+ +
Sbjct: 1065 ELLRHADARSTLQKLREDYTKALEQVEDLNKEIAL 1099
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 116 MVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 295
+VQ+ S L + L +D + K E L+ + R V+DL K + +Q T L+EK+Q
Sbjct: 194 LVQEKSALVSDLASLQSD-HSKVCEKLEVS----SRQVQDLEKKLAGLAQQNTELNEKIQ 248
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 29.5 bits (63), Expect = 0.31
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 250 PRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSDLTETGAKTESGIR 405
P R ++ ++RE NR T+ G + HGS LT+TG + ++
Sbjct: 15 PSRASSNTHLSREGTNRSSNVTRTV----SGRKSNHGSSLTDTGESDQLSLK 62
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 29.5 bits (63), Expect = 0.31
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +2
Query: 179 KAKEVLQQARQNLERTVEDLRKAHP--DVEKQATALHEKLQTAIQNTLKESQNLAKEVGV 352
KAK L+ ++LE D +A VEKQ +++E+L+ + + +E
Sbjct: 636 KAKGGLEVNAEDLEHLDADKLRAMQIEQVEKQNKSMNERLRVIGKRIDHLERAYRREAIP 695
Query: 353 NMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATKQ*RA 475
++ +++ A + + + K +EVQ++ HE A K +A
Sbjct: 696 LWEEDAKQQAEHDREIFYEREKQRKEVQERKHEQAIKDKKA 736
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.31
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 194 LQQARQNLERTVEDLRKAHPDVEK 265
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 29.1 bits (62), Expect = 0.41
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +2
Query: 59 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 238
+N S++ L + D + S + NG A+E+ A + L VE+L
Sbjct: 29 LNLPTNSSISVTLSQ-DDLRTVTTASCSEKFENDTLWLNGNAEEIF--ANKRLRVCVEEL 85
Query: 239 RKAHPDVEKQATALHE----KLQTAIQNTLKESQNLA 337
RKA D+E++ L + KL +N + LA
Sbjct: 86 RKARLDLEEENDDLDKIGALKLHVVSENNFPTAAGLA 122
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 29.1 bits (62), Expect = 0.41
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +2
Query: 20 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 199
D K+ FN+I + E K L ++ + +Q+SE++ +A KA++ L+
Sbjct: 14 DSLKSKISNFNSIFDRFLQEERKKLLNNKNEYL-RQLSEIN--------EAQKKAEKSLE 64
Query: 200 QARQNLERTVEDLRKAHPD---VEKQATALHEKLQTAIQNTLKESQNL 334
Q + E L K H + E++ + EKL ++ K S+ L
Sbjct: 65 QTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.7 bits (61), Expect = 0.54
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = +1
Query: 55 NRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRG 234
N KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 673 NHHRKESIPSKQPTEGQ---HARQESLPSQQTTETKHLRKE----STPSKQPTEGQHTRQ 725
Query: 235 SPQGAPRRRETSHRITREAANRHP---EHTKGEPEPGE 339
+ + ET H ++ P +H + E P +
Sbjct: 726 ESLPSQQTTETKHLRKESIPSKQPTEGQHARQESLPSQ 763
Score = 28.3 bits (60), Expect = 0.71
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +1
Query: 142 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EH 312
QQST RK S P+ P G H+R + + ET H ++ P +H
Sbjct: 667 QQSTVSNHHRKE----SIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQH 722
Query: 313 TKGEPEPGE 339
T+ E P +
Sbjct: 723 TRQESLPSQ 731
Score = 24.6 bits (51), Expect = 8.8
Identities = 22/80 (27%), Positives = 31/80 (38%)
Frame = +1
Query: 67 KEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQG 246
KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 709 KESTPSKQPTEGQ---HTRQESLPSQQTTETKHLRKE----SIPSKQPTEGQHARQESLP 761
Query: 247 APRRRETSHRITREAANRHP 306
+ + ET H ++ P
Sbjct: 762 SQQTTETKHLRKESIPSKQP 781
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 28.7 bits (61), Expect = 0.54
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +2
Query: 125 QVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE------KQATALHE 286
Q +E SN+ A ++ + + +E L L TV + R + + + A+ ++E
Sbjct: 550 QSNETSNTFPAASSNISSQLRE-LHTKIDELRETVSNFRADYNSIRTSLNQLEAASGINE 608
Query: 287 KLQTAIQNTLKESQNLAKEVGVNMDQTS 370
++QT ++L S ++ G QTS
Sbjct: 609 RIQTTSADSLLNSNGMSGTEGFENTQTS 636
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 28.3 bits (60), Expect = 0.71
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 20 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD-ANGKAKEVL 196
D T Q + I+ ++ +ES + A SM + S+S A NG+AKE
Sbjct: 426 DLNDTTKNQNDQILPNETSESDDDA--NSISSMENEEERTSDSKSSAKQGKGNGRAKETP 483
Query: 197 QQARQNLERTVED 235
++ R ++T ED
Sbjct: 484 EEKRARKKKTKED 496
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 0.94
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +2
Query: 68 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERT 226
K T++ + +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 213 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 94
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.5 bits (58), Expect = 1.2
Identities = 25/133 (18%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Frame = +2
Query: 74 TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQN----LERTVEDLR 241
TE+ + L + + ++ +++++L N+ Q + + K + + LE+T+EDL+
Sbjct: 875 TETKHDILAQRNRNVSEKMNDLENAAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLK 934
Query: 242 KAHPDVEKQATALHEKLQTAIQNTLKESQN---LAKEVGVNMDQTSQKLAPKLKAAYDDF 412
A D K L + + + + T K + L +E + +D+ + + ++
Sbjct: 935 LALQDELKNRNLLMDDISSYNKQTTKLQEKIKWLERERSILIDELESYRSNQFN-YQNNL 993
Query: 413 VKHAEEVQKKVHE 451
V+ E+++++ E
Sbjct: 994 VQDKNELEERLKE 1006
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 1.6
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +2
Query: 197 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 328
++AR+NL+ V + + P+++ + + +L+ I+++L Q
Sbjct: 85 RKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSLSSKQ 128
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 27.1 bits (57), Expect = 1.6
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 5/159 (3%)
Frame = +2
Query: 38 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 217
S + A V +NT+ L K L++ + + ++ L + N K KE +
Sbjct: 351 SNELLASVRDENTKKL-KELQDIIEEQSKHMARLHREGFSEAAENNDKPKETMPCT---Y 406
Query: 218 ERTVEDLRKAHPDVEK-QATALHEKLQTAIQNTLKESQNLAK-EVGVNMDQTSQKLAPKL 391
+ ++ D ++ K +A L + + ++ Q+L + E + + +K A +
Sbjct: 407 DSSLADDHSDTSNLSKDKANTLCAQCSVYLSEKYQQQQSLLQLESNIQQLENEKKAAKLI 466
Query: 392 KAAYDDFVKHAE---EVQKKVHEAATKQ*RALIDRRVAL 499
+ + H + E Q K H A Q R L D VAL
Sbjct: 467 EKDLLSQISHVKLQFEQQIKAHHYAKDQVRNLNDEMVAL 505
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.1 bits (57), Expect = 1.6
Identities = 28/147 (19%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Frame = +2
Query: 5 EEHAQDFQKTISEQFNAIVNSKNTESLN-KALKEGSDSMVQQVSELSNSLQGALTDANGK 181
+EH + ++ + A + +T S K +K +DS+ ++ N + + +
Sbjct: 879 KEHTEKIS-SLEKDLEAATKTASTLSKELKTVKSENDSLKSVSNDDQNKEKSVNNEKFKE 937
Query: 182 AKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMD 361
+ L +A + L E++ + D+ A + +LK+S N +++
Sbjct: 938 VSQALAEANEKLNARDEEIERLKVDIIGLQNA------SLNMQSLKDSDNRTIS---DLE 988
Query: 362 QTSQKLAPKLKAAYDDFVKHAEEVQKK 442
+++L KLK A + ++ EE++ K
Sbjct: 989 SKNKELEKKLKEADEYWLLIVEELESK 1015
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 27.1 bits (57), Expect = 1.6
Identities = 31/156 (19%), Positives = 65/156 (41%), Gaps = 11/156 (7%)
Frame = +2
Query: 50 NAIVNSKNTESLNKAL--KEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQAR-QNLE 220
N + K ES N+ ++ S S Q+ + + NS +T A+ +K+ A +
Sbjct: 11 NVMKKKKPNESSNRITFTEDDSSSSEQEHAPIPNSFSSQITAASDASKDDNYDASIYGFD 70
Query: 221 RTVEDLRKAHPDVEKQATALHEK------LQTAIQNTLKESQNL--AKEVGVNMDQTSQK 376
+ ++ A + + + L K ++ I++ K ++L A+E + +
Sbjct: 71 EFYDSMKSAERE-QMELKRLESKDRRPKYMENLIESAKKRKRDLLLARERALLKKNELEG 129
Query: 377 LAPKLKAAYDDFVKHAEEVQKKVHEAATKQ*RALID 484
K + KH EEVQK + + + +++ D
Sbjct: 130 DDATEKFVTSSYKKHREEVQKAIEDRKEEDEKSITD 165
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 2.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 35 ISEQFN-AIVNSKNTESLNKALKEGSDSMVQQVSELSNS--LQGALTDANGKAKEVLQQA 205
I +Q N +I N KNT N + K + + +S +SNS A+ + +AKE + A
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNSNASSPAIFEVGAEAKEKTKDA 542
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 218 ERTVEDLRK-AHPDVEKQATALHEKLQTAIQNTLKES 325
ERT E + A D+EKQ + H++ Q+++ + L+ES
Sbjct: 3 ERTSESSSESASFDLEKQQSNHHDRYQSSVSSELEES 39
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 59 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 154
V +TES N+A+K+ D+ ++ +SE LQ
Sbjct: 184 VKGSSTESHNQAIKDFRDAKIEVISEKDPILQ 215
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 26.6 bits (56), Expect = 2.2
Identities = 24/141 (17%), Positives = 51/141 (36%)
Frame = +2
Query: 5 EEHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKA 184
++ +++ +KT Q I L K + M S+++ + + N
Sbjct: 253 DQPSEEEEKTSDIQDRKIKTPIKPSLLGKIRSSVNKGMTDVASQVNRGMTDVASQVNKGV 312
Query: 185 KEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQ 364
V Q + + + K V Q KL+ K+ +NL K +G +
Sbjct: 313 NGVASQVNKGMNGVANQVNKGVTGVASQVRKPVGKLE-------KKFENLEKSIGDTLKS 365
Query: 365 TSQKLAPKLKAAYDDFVKHAE 427
+ + K + +DF ++ +
Sbjct: 366 SIRSSPKSKKRSREDFEENED 386
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 26.2 bits (55), Expect = 2.9
Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 3/119 (2%)
Frame = +2
Query: 59 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 238
V KN + + K L+ G+D + + ++ N + K+ AR L + D
Sbjct: 441 VTQKNAKLVAKLLRNGADPAMLNGN---GKTPFEISTGNKEVKDEFLIARHELGESFFDW 497
Query: 239 RKAH---PDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYD 406
A P +Q +K +T ++N ++ + ++ + + QK+ + K YD
Sbjct: 498 EAAKVGAPQSREQIQKQRQKAKTKLENQRRDKE---RQEELRRKEAMQKIEEQSKRDYD 553
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 26.2 bits (55), Expect = 2.9
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Frame = +2
Query: 56 IVNSKNTESLNKALKEGSDSMVQQVSE-LSNSLQGALTDANGKAKEVLQQARQNLERTVE 232
+V S N +LNK +E SDS+ Q S + NSL +L+ ++ +R NL+ +
Sbjct: 109 LVGSSN--ALNKPTRE-SDSLKHQKSHPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSR 165
Query: 233 DLRKAHPDVEKQATALHEK----LQTAIQNTLKESQNLAKE 343
A D + A L L++A++N L+ + K+
Sbjct: 166 WDNTADNDSQIDAQDLSRSTPSPLRSAMENVLQSLNAMGKK 206
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 3.8
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Frame = +2
Query: 68 KNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKA 247
+ + L+ S+ +++ N++ ALT A + Q E+T++DL +
Sbjct: 53 EGAQPLSSQSSRSSNYTNVKITATQNNVD-ALTGAPIRIVTTTNARIQPDEKTLQDLLEQ 111
Query: 248 HPDVEKQATALHEKLQTAIQ-NTLKESQNLAKEVGVNMDQTSQKLA-PKLKAAYDDFVKH 421
++A E+LQ A Q N S+ L E +LA + + A +
Sbjct: 112 RQVALREAREAEEELQRARQYNDRSTSEALELEARAKKAAQDAELASERAREAQSSIERS 171
Query: 422 AEEVQKKVHEAATKQ*RAL 478
A +K+ E A + AL
Sbjct: 172 ASLREKQAREEAERAATAL 190
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.8 bits (54), Expect = 3.8
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Frame = +2
Query: 89 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP----D 256
+ ++E S++ + SE+S + A+TD + KE+ A ++ + +KA P
Sbjct: 30 REIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEI-NMAIESPSKKATSPKKATPAAVAP 88
Query: 257 VE-KQATALHEKLQTAIQNTLK---ESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHA 424
VE A E + + N K +Q N+ Q +Q+ ++K + +
Sbjct: 89 VEATSAVDTSEAVASMTPNKRKARDPAQPKRPPSAYNLFQKNQR--SEIKESLGEKSNDV 146
Query: 425 EEVQKKVHE 451
+EV K +HE
Sbjct: 147 KEVNKAMHE 155
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 3.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 173 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTA 301
N +K L+ AR +L+ ++ED KA+ + E+ LQT+
Sbjct: 33 NQLSKLKLEDARADLQSSMEDSNKANGNGEETTDGAEGVLQTS 75
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 3.8
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 224 TVEDLRKAHPDVEKQATALHEKLQTAIQNT-LKESQNLAKEVGVNMDQTSQKLAPKLKAA 400
++ED + P ++ K + QN K++ K+ G+N +QTS + P ++
Sbjct: 1551 SLEDSNRQKPFNGEKFRRFSSKSRRGSQNRDSKKTGKARKDKGINNNQTSPQNKPSKESL 1610
Query: 401 YDDFVKHAEEV 433
D + + ++V
Sbjct: 1611 KSDTISNEKKV 1621
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 25.8 bits (54), Expect = 3.8
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 HEEHAQDFQKTISEQFNAIVNSKNT-ESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 178
HEEH+Q K I E N + ES N ALK + V N L+ D N
Sbjct: 393 HEEHSQKLLKFIEEIRNDYEERIHALESQNSALKA---HLRLAVDAYLNPLEFNFDDKNV 449
Query: 179 KAKE 190
K KE
Sbjct: 450 KLKE 453
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 161 LTDANGKAKEVLQQARQN 214
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 5.0
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +2
Query: 83 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 262
L K E SD ++ ++ LS+ L L DAN L+ L+ ++ L A P+V+
Sbjct: 6 LLKKYVESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQ 63
Query: 263 KQATALHEKLQTAI-QNTLKES-QNLAKEV 346
++A + + I Q+ LK + +NL V
Sbjct: 64 QEAVRCVAIISSKIPQDKLKSTVENLLSGV 93
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.4 bits (53), Expect = 5.0
Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Frame = +2
Query: 98 KEGSDSMVQQVSELSNSLQGALTDANG------KAKEVLQQARQNLERTVEDLRKAHPDV 259
KE SD + + E+ N L+ L+ + + Q N+ ++ + ++ D
Sbjct: 410 KENSDYLKTEYDEMENELKAKLSRKKEIEISLESQGDRMSQLLANIT-SINERKENLTDK 468
Query: 260 EKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTS 370
K KL+++I+N + K +G MD+ +
Sbjct: 469 RKSLWREEAKLKSSIENVKDDLSRSEKALGTTMDRNT 505
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 234 SSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--SEPSFSALF 85
++T+ + + W + +LP A C +D++ +C + S +S LF
Sbjct: 340 TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVSSDDYSDLF 391
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 25.0 bits (52), Expect = 6.7
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 260 EKQATALHEKLQTAIQNTLKE--SQ-NLAKEVGVNMDQTSQKLAPKLKAAYD 406
EKQ HEK+ ++ LKE SQ N AK++ ++ +Q + K+ ++
Sbjct: 234 EKQRNTEHEKIIRRMKKELKELHSQFNFAKKLFISALSANQDILDKMNDEFN 285
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 29 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 148
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 216 WSAQSRISARRTPTSRNKPPHYTRSCKPP 302
+ QSR S S N PP+ TR+ P
Sbjct: 103 FEVQSRYSGALKEVSSNTPPNMTRAASQP 131
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 8.8
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = -3
Query: 306 WMAVCSFSCNAVACFSTSGCALRRSSTVRSKFWRACWSTSL 184
W+ + S + F T+G R S + FWR + +
Sbjct: 105 WIVISSILAQVLLFFMTTGAVRRYSMMLCFFFWRISYDAGI 145
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 24.6 bits (51), Expect = 8.8
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +2
Query: 77 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 256
E + A E S++Q++SEL +QG L +++ RQ+ + ++ L++ +
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLEN--PDLIAALRQDKGQNLQHLQEHYNI 136
Query: 257 VEKQATALHEKLQ 295
++ L++ Q
Sbjct: 137 TPERIAVLYKFAQ 149
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 8.8
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +1
Query: 196 PTSSP--ELGAHSRGSPQG 246
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
>SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 437
Score = 24.6 bits (51), Expect = 8.8
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +2
Query: 185 KEVLQQARQNLERTVEDLRK-AHPDVEKQATALHEKLQTAIQ-NTLKESQNLAK---EVG 349
K + ++ R L +T R PD +K + HE++ Q + L+E + + E G
Sbjct: 242 KRMSKEERNLLNKTKAFARLLTGPDYQKFVNSYHEQITLKKQISDLQEWRQMGLTTLEQG 301
Query: 350 --VNMDQTSQKLAPKLKAAYDDFVKHAE 427
D+T + L K A+YD ++H +
Sbjct: 302 HKYERDKTQKFLLSKASASYDKQLRHVK 329
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,796,357
Number of Sequences: 5004
Number of extensions: 32109
Number of successful extensions: 209
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 206265012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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