Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_F02
(354 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.16
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 27 0.85
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 27 1.1
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 27 1.1
SPCC1795.01c |mad3|SPCC895.02|mitotic spindle checkpoint protein... 25 3.4
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 25 3.4
SPAC2F7.15 |rsm24||mitochondrial ribosomal protein subunit S24|S... 25 3.4
SPCC622.14 |||GTPase activating protein |Schizosaccharomyces pom... 25 3.4
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 4.5
SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 25 4.5
SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr 1|||Ma... 25 4.5
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 4.5
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 25 4.5
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 24 6.0
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 24 6.0
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 24 7.9
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 24 7.9
>SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 29.5 bits (63), Expect = 0.16
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 194 GSPTAPEIPPEEYSLNENEERAIIEPRSLEDPKVKE-LIQVLIDWINDE 337
G P A E+PP+++ + ++ +A++EP+ K K LI LI WI D+
Sbjct: 174 GRPVAFELPPDKF--HSDQSKALLEPKW----KTKNYLISHLIFWIIDQ 216
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 27.1 bits (57), Expect = 0.85
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 233 SLNENEERAIIEPRSLEDPKV-KELIQVLIDWINDELAPH 349
S N NE +I P SL V ++ I L D++ D APH
Sbjct: 234 SANSNEP-GVIGPNSLSRELVSRQTITTLTDYMTDSKAPH 272
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 26.6 bits (56), Expect = 1.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 IINNKNFEMSSPRPNSPRTP-VYLRKTTKKNL 101
+ N +FE SP PN RTP K + KN+
Sbjct: 606 VSRNTHFESKSPHPNYSRTPHETYSKASSKNV 637
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 26.6 bits (56), Expect = 1.1
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = -1
Query: 237 KLYSSGGISGAVGLPGESIANLPSA*TSCTSFMRFLRPMVPILSQKDSSLSSFLGKQVSL 58
++Y GG + ++++PS+ TS+ R L PM +++ K S + + SL
Sbjct: 514 RVYEKGGNWNRIAKT--PVSSVPSSPVQPTSYNRTLPPMPEVVAYKGDEESPRVSRNTSL 571
Query: 57 A 55
A
Sbjct: 572 A 572
>SPCC1795.01c |mad3|SPCC895.02|mitotic spindle checkpoint protein
Mad3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 3.4
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = -1
Query: 342 ANSSLIQSINTCISSFTLGSSRDLGSIIALSSFSFKLYSSGGISGAVGLPG 190
+N++ + + T S + + I+ F F +YS SG G PG
Sbjct: 208 SNTNSVNPLQTTFESTNIQEISQSRTKISKPKFKFSVYSDADGSGKDGQPG 258
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 25.0 bits (52), Expect = 3.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 191 PGSPTAPEIPPEEYSLNENEERAIIEPRSLEDPKVKE 301
P APE P E ++ +N + A +P S+ PKV+E
Sbjct: 58 PAEVQAPEEPKEPETV-DNIDPADDDPNSVAAPKVEE 93
>SPAC2F7.15 |rsm24||mitochondrial ribosomal protein subunit
S24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 258
Score = 25.0 bits (52), Expect = 3.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 298 FYFRVFKRSRFYNSPFFI 245
FYF FKRS + ++PF I
Sbjct: 35 FYFTRFKRSAYVSAPFGI 52
>SPCC622.14 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 25.0 bits (52), Expect = 3.4
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 182 IDSPGSPTAPEIPPEEYS 235
IDSP S A PPE+YS
Sbjct: 284 IDSPYSALAASPPPEDYS 301
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 24.6 bits (51), Expect = 4.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -1
Query: 342 ANSSLIQSINTCISSFTLGSSRDLGSIIALSSFSFKLYSSGGISGAVGLPGESIANLPSA 163
+++SL S + ++S + S S ALSS S L +S S + G+ S+++ S
Sbjct: 94 SSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVAS---SSSSGMSSSSLSHSSSV 150
Query: 162 *TSCTSF 142
+S +S+
Sbjct: 151 PSSSSSY 157
>SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory
subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 545
Score = 24.6 bits (51), Expect = 4.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 9 IINNKNFEMSSPRPNSPRTPVYLRKTTKK 95
++NN+N ++P+ + TP RK+ K+
Sbjct: 62 VVNNENIITTTPKHQTVITPKSYRKSVKR 90
>SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 387
Score = 24.6 bits (51), Expect = 4.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 16 ITKISKCLHHALTRQGHLF 72
I I +CLH+ L+R+ H F
Sbjct: 230 IVAILQCLHYGLSRRKHTF 248
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 24.6 bits (51), Expect = 4.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 203 TAPEIPPEEYSLNENEERAI 262
+AP I PEEY+ +E + RA+
Sbjct: 523 SAPYIAPEEYTESEFDPRAV 542
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 24.6 bits (51), Expect = 4.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 342 ANSSLIQSINTCISSFTLGSSRDLGSIIA 256
+ LI++I TCISS G+ L ++A
Sbjct: 155 SEKELIKAIRTCISSKQYGNEDFLSDLVA 183
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 24.2 bits (50), Expect = 6.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 342 ANSSLIQSINTCISSFTLGSSRDLGSIIALSSFSFKLYSSGGISGAVGLPG 190
A+ SLI S+N+ I + + L S I L + +++ SS S + G
Sbjct: 192 ASFSLISSLNSSIHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSG 242
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 24.2 bits (50), Expect = 6.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 3 TRIINNKNFEMSSPRPNSPRTPVYLRKTTKKNLSGTRLAP 122
T++ + N E+ S RP + Y T KN+ T AP
Sbjct: 524 TKLESKTNDEIRSYRPRNVVIKPYAAATPPKNIPSTYRAP 563
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 23.8 bits (49), Expect = 7.9
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 197 SPTAPEIPPEEY-SLNENEERAIIEPRSLEDPKVKELIQVLID 322
+P+AP PP+EY LN + + ++ L+ + E+ +D
Sbjct: 166 NPSAPPPPPQEYRQLNVTDALSYLDLVKLQFHQEPEIYNEFLD 208
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 23.8 bits (49), Expect = 7.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 206 APEIPPEEYSLNENEERAIIEPRSLEDP 289
APEIP ++ N+ E I + LE+P
Sbjct: 208 APEIPVKQQIKNDKEALGIQAQQLLEEP 235
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,465,895
Number of Sequences: 5004
Number of extensions: 28457
Number of successful extensions: 115
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 105935336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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