Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_F02
         (354 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   2.5  
Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease prot...    23   4.4  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   4.4  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       23   4.4  
EF588653-1|ABQ96839.1|  176|Anopheles gambiae transposase protein.     22   5.9  
EF588460-1|ABQ96696.1|  177|Anopheles gambiae transposase protein.     22   5.9  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -1

Query: 333 SLIQSINTCISSFTL 289
           S ++S++ CISSFTL
Sbjct: 199 STLRSLHDCISSFTL 213


>Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 281 EDPKVKELIQVLIDWINDEL 340
           ++P V   +   IDWIND++
Sbjct: 247 KNPGVFVRVSYFIDWINDKI 266


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 33  MSSPRPNSPRTPVYLRKTTKKNLSGT 110
           +S  R N PR+ ++++    K+ SGT
Sbjct: 138 LSHARKNLPRSWMFMQDNDSKHTSGT 163


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 18  NKNFEMSSPRPNSPRTP 68
           N+N E   PRP  P+TP
Sbjct: 89  NQN-EQQQPRPQPPKTP 104


>EF588653-1|ABQ96839.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 14/55 (25%), Positives = 21/55 (38%)
 Frame = +2

Query: 182 IDSPGSPTAPEIPPEEYSLNENEERAIIEPRSLEDPKVKELIQVLIDWINDELAP 346
           ID    P+A    P     N N        + + +   K L ++L+D I  E  P
Sbjct: 67  IDDEAGPSAVNFQPSNQYFNSNMSIQGYLKKPINNETKKVLDRMLLDLICKECLP 121


>EF588460-1|ABQ96696.1|  177|Anopheles gambiae transposase protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 14/55 (25%), Positives = 21/55 (38%)
 Frame = +2

Query: 182 IDSPGSPTAPEIPPEEYSLNENEERAIIEPRSLEDPKVKELIQVLIDWINDELAP 346
           ID    P+A    P     N N        + + +   K L ++L+D I  E  P
Sbjct: 68  IDDEAGPSAVNFQPSNQYFNSNMSIQGYLKKPINNETKKVLDRMLLDLICKECLP 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,190
Number of Sequences: 2352
Number of extensions: 7592
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)