Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_F01
(281 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 89 1e-19
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 64 3e-12
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 60 6e-11
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 55 2e-09
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 54 3e-09
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 52 2e-08
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 38 2e-04
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 36 0.001
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 25 2.1
SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual 25 2.1
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 25 2.1
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 25 2.7
SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase Prs1|Schizo... 24 3.6
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 24 3.6
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 24 4.7
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 24 4.7
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 23 8.3
SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces ... 23 8.3
SPCC16A11.05c |dim1||U4/U6 x U5 tri-snRNP complex subunit Dim1|S... 23 8.3
SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual 23 8.3
SPCC736.04c |gma12||alpha-1,2-galactosyltransferase Gma12 |Schiz... 23 8.3
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 23 8.3
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 88.6 bits (210), Expect = 1e-19
Identities = 40/87 (45%), Positives = 60/87 (68%)
Frame = +2
Query: 5 EDINDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDE 184
+ ++D + K+ + + DKLVV+DF ATWCGPCK I PK ++ +N SD+ +KVDVD+
Sbjct: 3 KQVSDSSEFKSIVCQ--DKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDA-TFIKVDVDQ 59
Query: 185 CEDIAAECNINAMPTFVYVKATKKLEE 265
+IAAE ++AMP+F K +K+EE
Sbjct: 60 LSEIAAEAGVHAMPSFFLYKNGEKIEE 86
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 64.5 bits (150), Expect = 3e-12
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = +2
Query: 11 INDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECE 190
+ F D TR+S DK+ V+DF A WCGPCK + P L+++ +E + + V+ D+
Sbjct: 22 VESFGDYNTRIS--ADKVTVVDFYADWCGPCKYLKPFLEKL-SEQNQKASFIAVNADKFS 78
Query: 191 DIAAECNINAMPTFVYVKATKKLE 262
DIA + + A+PT V + ++L+
Sbjct: 79 DIAQKNGVYALPTMVLFRKGQELD 102
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 60.1 bits (139), Expect = 6e-11
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +2
Query: 65 VVIDFMATWCGPCKMIGPKLDEMANEM-SDSIVVLKVDVDECEDIAAECNINAMPTFVYV 241
+ +D A WCGPCK I P ++A++ S V KV+VDE IA+ + AMPTFV+
Sbjct: 22 LAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFF 81
Query: 242 KATKKLE 262
+ K+++
Sbjct: 82 ENGKQID 88
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 55.2 bits (127), Expect = 2e-09
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 NDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVDEC 187
++FDD+ + E D V+++F A WCG CK + P +++A E SD ++VV K+D E
Sbjct: 363 DNFDDIV--MDETKD--VLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATE- 417
Query: 188 EDIAAECNINAMPTFVYVKATKKL 259
DI+ +I+ PT ++ KA K+
Sbjct: 418 NDISV--SISGFPTIMFFKANDKV 439
Score = 54.0 bits (124), Expect = 4e-09
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 56 DKLVVIDFMATWCGPCKMIGPKLDEMANEM-SDSIVVLKVDVDECEDIAAECNINAMPTF 232
DK++++ F A WCG CK + P+ + A+E+ D I +++VD E D+ +E +I PT
Sbjct: 39 DKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTL 98
Query: 233 VYVKATKKLEE 265
K K++ +
Sbjct: 99 NVFKNGKQISQ 109
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 54.4 bits (125), Expect = 3e-09
Identities = 23/84 (27%), Positives = 46/84 (54%)
Frame = +2
Query: 8 DINDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDEC 187
+I + + L +++++++F A W PCK + D+ A + ++ V LK++ ++
Sbjct: 4 EITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNA-VFLKIEAEKF 62
Query: 188 EDIAAECNINAMPTFVYVKATKKL 259
DIA ++NA+P FV + K L
Sbjct: 63 SDIAESFDVNAVPLFVLIHGAKVL 86
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 51.6 bits (118), Expect = 2e-08
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +2
Query: 8 DINDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVD 181
++ ++L+ + A K +I+F ATWCG CK + P +E+ D +++ K+D D
Sbjct: 24 ELQSLNELENTI-RASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDAD 82
Query: 182 ECEDIAAECNINAMPTFVY 238
D+A + +I PT ++
Sbjct: 83 THSDVADKYHITGFPTLIW 101
Score = 38.3 bits (85), Expect = 2e-04
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 59 KLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVDECEDIAAECNINAMPTF 232
K V+++F A WCG CK + P + + + ++ ++K++ D DI + + PT
Sbjct: 159 KDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTI 218
Query: 233 VY 238
+
Sbjct: 219 KF 220
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 38.3 bits (85), Expect = 2e-04
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 53 GDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECED--IAAECNINAMP 226
G LVV F A WCG CK + P ++A+ + + V VD D ++ + ++ + P
Sbjct: 49 GPSLVV--FYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFP 106
Query: 227 TFVYVKATKK 256
T V + K
Sbjct: 107 TIKLVYPSSK 116
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 35.5 bits (78), Expect = 0.001
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +2
Query: 44 SEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKV---DVDECEDIAAECNI 214
SE I + CG CK +GP D M + + + +VD +++++ NI
Sbjct: 38 SEVSKGTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANI 97
Query: 215 NAMPTFVYVKATKKLEESP 271
A+PT + + +EE P
Sbjct: 98 RAVPTLYLYQNGEIVEEVP 116
Score = 27.5 bits (58), Expect = 0.38
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 71 IDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAECNINAMPTFVYVK 244
I F ++ C C + MAN M + V ++ + + +I PTF++ K
Sbjct: 303 IQFYSSECDDCDDVSTAWYAMANRMRGKLNVAHINCAVSKRACKQYSIQYFPTFLFFK 360
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.0 bits (52), Expect = 2.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 159 LFLRSTLTNAKTSPPNVTSTRCRLSCMLRR 248
LFL STL A S P VT ++ LR+
Sbjct: 636 LFLTSTLAAATQSSPEVTEEVKKIEASLRK 665
>SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 25.0 bits (52), Expect = 2.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = -2
Query: 145 HFVSHLVEFGPDHLAGSAPSRHEVNHDELVARLRQPGL 32
HF SHL + P G S +NH Q GL
Sbjct: 207 HFDSHLDSWKPKVFGGGKSSVGSINHGTYFYHASQEGL 244
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 2.1
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 32 KTRLSEAGDKLVVI---DFMATWCGPCKMIGPKLDEMANEMSDSIVVL 166
K +EAG I D ++ W G + + +L EMA E SI+ +
Sbjct: 180 KAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFI 227
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 2.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 23 DDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIV 160
D + RL EAG + +A CGPC + + D++A+ ++I+
Sbjct: 433 DGITERLEEAGATV-----LANACGPCIGMWKRTDDIASGEPNAIL 473
>SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase
Prs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 24.2 bits (50), Expect = 3.6
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 122 LDEMANEMSDSIVVLKVDVDECEDIAAECNINAMPTFVYVKATK 253
L ++ ++DS++ L + + C+ +A+ MP F Y K +K
Sbjct: 56 LQSGSSTVNDSLMELLIIISACKGGSAKRITAVMPYFPYSKQSK 99
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 24.2 bits (50), Expect = 3.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 146 SDSIVVLKVDVDECEDIAAECNINAMPTFVYVKATKKLEESPAR 277
SDS V D D+ E MP + V++ K+LE P R
Sbjct: 460 SDSFDTSNVTQDAPNDVEKEPISGQMPNNLSVQSLKQLEVYPIR 503
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 23.8 bits (49), Expect = 4.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 111 SGPNSTRWLTKCPTPLLFLRSTLTNAKTSPP 203
S NST + TPL + ST T + +S P
Sbjct: 293 SSANSTTATSASSTPLTSVNSTTTTSASSTP 323
Score = 23.0 bits (47), Expect = 8.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 111 SGPNSTRWLTKCPTPLLFLRSTLTNAKTSPPNVTST 218
S NST + TPL + ST + +S P ST
Sbjct: 540 SSANSTTATSASSTPLTSVNSTTATSASSTPFGNST 575
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 23.8 bits (49), Expect = 4.7
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 20 FDDLKTRLSEAGDKL 64
+DDL +L+EAGD+L
Sbjct: 33 YDDLGNQLNEAGDEL 47
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 23.0 bits (47), Expect = 8.3
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -3
Query: 150 SDISLAISSSLGPIILQGPHQVAMKSITTSLSPASDSLVFKSSKSLMSS 4
S +++ SSS P+ A S TSL +S SS SL SS
Sbjct: 53 SATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSS 101
Score = 23.0 bits (47), Expect = 8.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 129 SSSLGPIILQGPHQVAMKSITTSLSPASDSLVFKSSKSLMSS 4
SSS + S + +LS +S SLV SS S MSS
Sbjct: 100 SSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSS 141
>SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 846
Score = 23.0 bits (47), Expect = 8.3
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 133 HLVEFGP-DHLAGSAPSRHEVNHDELVARLRQPGLQVIEVID 11
H E G DHLA + H +NH L+ ++ P LQ + +D
Sbjct: 602 HCGEAGDTDHLASAFLLSHGINHGILLRKV--PFLQYLWYLD 641
>SPCC16A11.05c |dim1||U4/U6 x U5 tri-snRNP complex subunit
Dim1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 142
Score = 23.0 bits (47), Expect = 8.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 41 LSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECED 193
LSE ++LVVI F C L +A ++ + V+ VD+DE D
Sbjct: 19 LSEQ-ERLVVIRFGRDHDEECIKQDEVLYRIAEKVVNMAVIYLVDIDEVPD 68
>SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual
Length = 353
Score = 23.0 bits (47), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 250 GRLNIHESRHRVDVTFGGDVFAFVNVDLKNNNGV 149
G L + E+ V FG + V LKNNNGV
Sbjct: 290 GSLLVEEAGGVVSDMFGKPLDFGVGRTLKNNNGV 323
>SPCC736.04c |gma12||alpha-1,2-galactosyltransferase Gma12
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 375
Score = 23.0 bits (47), Expect = 8.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 171 STLTNAKTSPPNVTSTRCRLSCMLRRPRNSK 263
+TLT T+ P VTS L+ P NSK
Sbjct: 73 ATLTETFTATPTVTSVVHALATTDPHPDNSK 103
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 23.0 bits (47), Expect = 8.3
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = -3
Query: 144 ISLAISSSLGPIILQGPHQVAMKSITTSLS----PASDSLVFKSSK 19
IS ISSS I++ P S TT+++ PA+++++ +SSK
Sbjct: 307 ISSTISSS--SFIVESPSVALSTSSTTTITNASTPAANTIISRSSK 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,061,806
Number of Sequences: 5004
Number of extensions: 18202
Number of successful extensions: 98
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 63619130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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