Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_E24
         (212 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   2.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   2.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    20   2.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    20   2.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   5.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    19   5.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    19   6.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    19   6.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    19   8.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    19   8.9  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 76  PSGSDSNSHQVATAHSS 126
           P+ + SN H+  + H+S
Sbjct: 274 PASASSNEHEAESEHTS 290


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = -2

Query: 136 FNNAKNVLWPPGANLSP 86
           +NN  N LW P     P
Sbjct: 66  YNNVNNWLWTPFIERGP 82


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = +2

Query: 41  ASCHPSRHNANVRLVRTQIRTRWPQHILRVVKYICSHC 154
           A CH +  + +       +    P H L   K++CS C
Sbjct: 76  AGCHSNLLSTSPSGQNKAVAPYPPNHPLSGSKHLCSIC 113


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = +2

Query: 41  ASCHPSRHNANVRLVRTQIRTRWPQHILRVVKYICSHC 154
           A CH +  + +       +    P H L   K++CS C
Sbjct: 76  AGCHSNLLSTSPSGQNKAVAPYPPNHPLSGSKHLCSIC 113


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 21  KNEHVSTLHVIHHGIMPM 74
           +N H STL + H  + P+
Sbjct: 239 ENRHSSTLDIDHKMLTPI 256


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 9   VLRKKNEHVSTLHVIHHGIMPMSVWFG 89
           V  ++ ++VS LH+I    +   +W G
Sbjct: 453 VSAEREKNVSLLHLIFPPDIAKRLWLG 479


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 108 GHSTFFALLNTFVHIVIYFYYMVAA 182
           GH+ F ++ +   HI      +VAA
Sbjct: 202 GHAAFISMRHRGAHITDIVVLVVAA 226


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 142 NVFNNAKNVLWPPGANLSPNQT 77
           N  NNAK       +NL+ NQT
Sbjct: 523 NKRNNAKIYTSSVNSNLTVNQT 544


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 142 NVFNNAKNVLWPPGANLSPNQTDI 71
           N+F   +N      AN  PN  DI
Sbjct: 365 NIFKALRNRARKARANRKPNLGDI 388


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +2

Query: 107 WPQHIL 124
           WPQH+L
Sbjct: 583 WPQHML 588


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,657
Number of Sequences: 438
Number of extensions: 1063
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3165825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)