Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_E22
(537 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 243 2e-65
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 235 3e-63
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 208 5e-55
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 201 5e-53
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 148 5e-37
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 85 6e-18
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 69 4e-13
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 46 3e-06
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.19
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 29 0.58
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 2.3
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 26 4.1
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 7.2
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 25 7.2
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 7.2
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 9.5
SPCC18.15 |||WD repeat protein, human WRDR85 family|Schizosaccha... 25 9.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 243 bits (594), Expect = 2e-65
Identities = 113/143 (79%), Positives = 127/143 (88%)
Frame = +3
Query: 108 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 287
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 288 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 467
TIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 468 KMTETAEAYLGKTVQNAVITVPA 536
KM ETAEAYLG V +AV+TVPA
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPA 146
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 235 bits (575), Expect = 3e-63
Identities = 109/143 (76%), Positives = 125/143 (87%)
Frame = +3
Query: 108 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 287
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 288 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 467
TIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 468 KMTETAEAYLGKTVQNAVITVPA 536
KM E+AEA+LG V +AV+TVPA
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPA 146
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 208 bits (507), Expect = 5e-55
Identities = 96/143 (67%), Positives = 115/143 (80%)
Frame = +3
Query: 108 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 287
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 288 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 467
T+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 468 KMTETAEAYLGKTVQNAVITVPA 536
KM E +EA L K V+ AVITVPA
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPA 150
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 201 bits (491), Expect = 5e-53
Identities = 91/142 (64%), Positives = 116/142 (81%)
Frame = +3
Query: 111 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 290
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 291 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 470
IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 471 MTETAEAYLGKTVQNAVITVPA 536
M +TAEAYLGK V +AV+TVPA
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPA 179
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 148 bits (359), Expect = 5e-37
Identities = 72/151 (47%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = +3
Query: 87 NKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKN 263
N+ K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK
Sbjct: 45 NEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKR 104
Query: 264 QVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPE 443
Q +NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P
Sbjct: 105 QAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG---DAWLEARGKTYSPS 161
Query: 444 EVSSMVLTKMTETAEAYLGKTVQNAVITVPA 536
++ +L+KM ETA YLGK V+NAV+TVPA
Sbjct: 162 QIGGFILSKMRETASTYLGKDVKNAVVTVPA 192
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 85.0 bits (201), Expect = 6e-18
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Frame = +3
Query: 96 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 275
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 276 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 452
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 453 SMVLTKMTETAEAYLGKTVQNAVITVPA 536
+ TK+ AEA L +V + VI++PA
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIPA 150
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 68.9 bits (161), Expect = 4e-13
Identities = 39/147 (26%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Frame = +3
Query: 111 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 290
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 291 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGE------DKTFFPEEVS 452
+ + + L+G+ ++ T+ H+ V+ G+ K+ + + +K E S
Sbjct: 87 VTNFRDLLGKSHDELTLH--HCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEAS 144
Query: 453 SMVLTKMTETAEAYLGKTVQNAVITVP 533
L ++TE+AE +LG V V++VP
Sbjct: 145 VRHLRRLTESAEDFLGTKVNGCVMSVP 171
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 46.4 bits (105), Expect = 3e-06
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Frame = +3
Query: 111 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 287
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 288 TIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMV 461
+I + K L+ E VQ +P + + + +++ +++ + EE+ +M
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMT 144
Query: 462 LTKMTETAEAYLGKTVQNAVITVP 533
+ AE + + + V+TVP
Sbjct: 145 MEHYISLAEEMAHEKITDLVLTVP 168
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.19
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 216 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 395
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 396 KIKVAYKGEDKTFFPE 443
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 28.7 bits (61), Expect = 0.58
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = -2
Query: 395 WFTSITDNLERPVFHVGLYG---GIFKFASDKTFGIKDGVIGVHR 270
WFT + R V + LY G+F + D TFG+ HR
Sbjct: 684 WFTKKMPKIVRVVVFISLYAIIAGVFIYFKDVTFGMHGPASDFHR 728
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 2.3
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = -2
Query: 275 HRNLVLGCITDKTLSVGERN 216
H++++L C +D+T+ +GE N
Sbjct: 321 HQDIILSCSSDRTIFLGELN 340
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.8 bits (54), Expect = 4.1
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = -2
Query: 434 EGLVLTLVCHLDLWFTSITDNLERPVFHVGLYGGIFKFASDKTFGIKDGVIGVHRNLVLG 255
EGLV L L+ S DNL+ ++G++GG + + +G+ + G
Sbjct: 3 EGLVAGL---LNKILGSYVDNLDTKQLNIGVWGGHVSLHNLRIKPEALDKLGIPIEITSG 59
Query: 254 CITDKTLSVGERNVRGRS 201
I TL + N+R +S
Sbjct: 60 LIGTFTLEIPWSNLRNKS 77
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 422 LTLVCHLDLWFTSITDNLERPVFHVGLYGGIFKFASDKTFGI 297
LT + L + S+TDN+ER +F +G GI S F +
Sbjct: 141 LTNIALLLATYPSVTDNIERFIF-MGGSTGIGNITSQAEFNV 181
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 424 SSPLYATLIFGLPPSLTTSKGQCFMSACTVASSNLRPIRRLASKMVLLG 278
SSP++AT F P S T +S + A+ P RR+ + LG
Sbjct: 72 SSPMHATKGFRFPKSSTPLTLPAVLSVASFANLLQIPTRRILRDLNRLG 120
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 355 FMSACTVASSNLRPIRRLASKMVLLGFIATWFLAASPIRRSVS 227
F + C N +P S+ V GFI W +AA PI S +
Sbjct: 1543 FFTICAYTFMNSQPGLEDKSRAVN-GFIRIWIMAALPIAISTA 1584
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 114 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 200
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPCC18.15 |||WD repeat protein, human WRDR85
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 310
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 401 DLWFTSITDNLERPVFHVGLYGGIFKFASDKTFGIKDGVIGV 276
D T T N+ +P+F L GG+++ +T V+G+
Sbjct: 209 DFMHTLDTRNIGKPLFSANLGGGVWRLEHMETTENYHKVLGI 250
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,208,857
Number of Sequences: 5004
Number of extensions: 44809
Number of successful extensions: 146
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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