Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_E22
(537 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 257 3e-69
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 251 3e-67
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 227 3e-60
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 227 3e-60
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 221 3e-58
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 212 2e-55
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 212 2e-55
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 208 1e-54
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 138 3e-33
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 134 3e-32
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 122 2e-28
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 122 2e-28
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 101 3e-22
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 95 3e-20
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 67 7e-12
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 67 7e-12
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 56 1e-08
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ... 32 0.30
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ... 32 0.30
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 30 1.2
U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical pr... 29 2.8
U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z71262-7|CAA95811.2| 368|Caenorhabditis elegans Hypothetical pr... 28 4.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 257 bits (630), Expect = 3e-69
Identities = 120/149 (80%), Positives = 136/149 (91%), Gaps = 1/149 (0%)
Frame = +3
Query: 93 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 272
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 273 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 449
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 450 SSMVLTKMTETAEAYLGKTVQNAVITVPA 536
SSMVL KM ETAEA+LG TV++AV+TVPA
Sbjct: 121 SSMVLLKMKETAEAFLGTTVKDAVVTVPA 149
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 251 bits (614), Expect = 3e-67
Identities = 117/148 (79%), Positives = 134/148 (90%), Gaps = 1/148 (0%)
Frame = +3
Query: 93 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 272
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 273 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 449
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 450 SSMVLTKMTETAEAYLGKTVQNAVITVP 533
SSMVL KM +TAEA+L TV++AV+TVP
Sbjct: 121 SSMVLLKMKKTAEAFLEPTVKDAVVTVP 148
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 227 bits (556), Expect = 3e-60
Identities = 103/148 (69%), Positives = 125/148 (84%)
Frame = +3
Query: 93 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 272
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 273 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 452
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 453 SMVLTKMTETAEAYLGKTVQNAVITVPA 536
+MVL KM ETAE YLG TV++AVITVPA
Sbjct: 121 AMVLQKMKETAETYLGHTVKDAVITVPA 148
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 227 bits (556), Expect = 3e-60
Identities = 103/148 (69%), Positives = 125/148 (84%)
Frame = +3
Query: 93 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 272
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 273 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 452
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 453 SMVLTKMTETAEAYLGKTVQNAVITVPA 536
+MVL KM ETAE YLG TV++AVITVPA
Sbjct: 121 AMVLQKMKETAETYLGHTVKDAVITVPA 148
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 221 bits (539), Expect = 3e-58
Identities = 100/148 (67%), Positives = 124/148 (83%)
Frame = +3
Query: 93 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 272
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 273 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 452
NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEIS 120
Query: 453 SMVLTKMTETAEAYLGKTVQNAVITVPA 536
+MVL KM ETAEA LG +V++AVITVPA
Sbjct: 121 AMVLQKMKETAEAVLGHSVRDAVITVPA 148
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 212 bits (517), Expect = 2e-55
Identities = 98/144 (68%), Positives = 119/144 (82%), Gaps = 2/144 (1%)
Frame = +3
Query: 111 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 284
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 285 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 464
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+MVL
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 465 TKMTETAEAYLGKTVQNAVITVPA 536
KM E AE+YLGK V+NAV+TVPA
Sbjct: 156 VKMKEIAESYLGKEVKNAVVTVPA 179
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 212 bits (517), Expect = 2e-55
Identities = 98/144 (68%), Positives = 119/144 (82%), Gaps = 2/144 (1%)
Frame = +3
Query: 111 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 284
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 285 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 464
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+MVL
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 465 TKMTETAEAYLGKTVQNAVITVPA 536
KM E AE+YLGK V+NAV+TVPA
Sbjct: 156 VKMKEIAESYLGKEVKNAVVTVPA 179
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 208 bits (509), Expect = 1e-54
Identities = 98/144 (68%), Positives = 117/144 (81%), Gaps = 2/144 (1%)
Frame = +3
Query: 111 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT--ERLIGDAAKNQVAMNPN 284
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 285 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 464
NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEVS+MVL
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVL 152
Query: 465 TKMTETAEAYLGKTVQNAVITVPA 536
TKM + AE+YLG V+NAV+TVPA
Sbjct: 153 TKMKQIAESYLGHEVKNAVVTVPA 176
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 138 bits (333), Expect = 3e-33
Identities = 73/148 (49%), Positives = 96/148 (64%), Gaps = 2/148 (1%)
Frame = +3
Query: 99 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 275
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 276 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 452
N NT+F KRLIGR++ED VQ D+K P+++V + G + + + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKVYSPSQVG 145
Query: 453 SMVLTKMTETAEAYLGKTVQNAVITVPA 536
+ VL KM ETAE+YLG TV NAV+TVPA
Sbjct: 146 AFVLMKMKETAESYLGTTVNNAVVTVPA 173
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 134 bits (325), Expect = 3e-32
Identities = 72/148 (48%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
Frame = +3
Query: 99 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 275
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 276 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 452
N NT+F KRLIGR++ED VQ D+K P+++V + G + + + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKEYPPSQVG 145
Query: 453 SMVLTKMTETAEAYLGKTVQNAVITVPA 536
+ VL KM ETAE+YLG TV N V+TVPA
Sbjct: 146 AFVLMKMKETAESYLGTTVNNPVVTVPA 173
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 122 bits (293), Expect = 2e-28
Identities = 64/145 (44%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
Frame = +3
Query: 108 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 284
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 285 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 461
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 462 LTKMTETAEAYLGKTVQNAVITVPA 536
L + AE LG V++AVITVPA
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPA 145
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 122 bits (293), Expect = 2e-28
Identities = 64/145 (44%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
Frame = +3
Query: 108 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 284
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 285 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 461
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 462 LTKMTETAEAYLGKTVQNAVITVPA 536
L + AE LG V++AVITVPA
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPA 145
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 101 bits (242), Expect = 3e-22
Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Frame = +3
Query: 114 GIDLGTTYSCVGVFQH--GKVEIIANDQGNRTTPSYVAFTDTER-LIGDAAKNQVAMNPN 284
GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG A Q NP
Sbjct: 37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPK 96
Query: 285 NTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 455
TI+DAKR IGR FE + +D K +PF++ D GK ++ K +PEE+ S
Sbjct: 97 RTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEIGS 156
Query: 456 MVLTKMTETAEAYLGKTVQNAVITVPA 536
+++ + A +LG T+ VI+ PA
Sbjct: 157 LIIGYLKSAAAKHLGVTLGQVVISCPA 183
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 95.1 bits (226), Expect = 3e-20
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Frame = +3
Query: 111 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 290
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 291 IFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLT 467
+ + K LIGRKF D Q + P +VV ++V+Y GE TF PE+V + +LT
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLT 123
Query: 468 KMTETAEAYLG--KTVQNAVITVPA 536
K+ E+ L K V + V+ VP+
Sbjct: 124 KLRTIVESQLSDVKKVSDCVLAVPS 148
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 67.3 bits (157), Expect = 7e-12
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Frame = +3
Query: 96 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 272
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 8 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 67
Query: 273 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 449
+P ++ +I RK D K +PF D + + YK E+K + E +
Sbjct: 68 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETL 125
Query: 450 SSMVLTKMTETAEAYLGKTVQNAVITVP 533
+M+L + EAY +TV++ VITVP
Sbjct: 126 LAMILWNAKKVTEAYADQTVKDVVITVP 153
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 67.3 bits (157), Expect = 7e-12
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Frame = +3
Query: 96 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 272
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 24 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 83
Query: 273 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 449
+P ++ +I RK D K +PF D + + YK E+K + E +
Sbjct: 84 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETL 141
Query: 450 SSMVLTKMTETAEAYLGKTVQNAVITVP 533
+M+L + EAY +TV++ VITVP
Sbjct: 142 LAMILWNAKKVTEAYADQTVKDVVITVP 169
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 56.4 bits (130), Expect = 1e-08
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Frame = +3
Query: 108 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 284
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 285 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 464
L+G+ + + + + F V D K + +K +++ E +++M+L
Sbjct: 86 LVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAMIL 145
Query: 465 TKMTETAEAYL-GKTVQNAVITVP 533
+ E Y +++ VITVP
Sbjct: 146 ANAKKFTEEYAQAAEIKDVVITVP 169
>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
protein 6, isoform b protein.
Length = 1227
Score = 31.9 bits (69), Expect = 0.30
Identities = 20/76 (26%), Positives = 29/76 (38%)
Frame = -2
Query: 524 DDCILHSFAEVSFGSFRHFCEHHRADLLREEGLVLTLVCHLDLWFTSITDNLERPVFHVG 345
D C+ A + + +C HH L + + L L +DL + L P FHVG
Sbjct: 66 DQCVRIVIAPANLKHSKKYC-HHEGGELMDTSVTLLLEDVMDLLKNLHENGLSEPTFHVG 124
Query: 344 LYGGIFKFASDKTFGI 297
G D + I
Sbjct: 125 GMGQALNRTEDGNYKI 140
>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
protein 6, isoform d protein.
Length = 1196
Score = 31.9 bits (69), Expect = 0.30
Identities = 20/76 (26%), Positives = 29/76 (38%)
Frame = -2
Query: 524 DDCILHSFAEVSFGSFRHFCEHHRADLLREEGLVLTLVCHLDLWFTSITDNLERPVFHVG 345
D C+ A + + +C HH L + + L L +DL + L P FHVG
Sbjct: 35 DQCVRIVIAPANLKHSKKYC-HHEGGELMDTSVTLLLEDVMDLLKNLHENGLSEPTFHVG 93
Query: 344 LYGGIFKFASDKTFGI 297
G D + I
Sbjct: 94 GMGQALNRTEDGNYKI 109
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 81 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 218
K+N K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 92 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 137
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 81 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 218
K+N K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 280 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 81 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 218
K+N K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 280 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical
protein C26E6.7a protein.
Length = 633
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Frame = -2
Query: 533 WNRDDCILHSFAEVSFGSFR-HFCEHHRADLLREEGLVLTLVCHLDLWFTSI-------T 378
+ + D L S + ++ +F HF EH R LLR L+L+C+ + + T
Sbjct: 248 FQKHDDFLESTSRLTIKNFSCHFDEHQRLKLLRNND--LSLICNYQIGSENTPIFNQRST 305
Query: 377 DNLERPVFHVGL 342
D + RPVF GL
Sbjct: 306 DCMLRPVFIDGL 317
>U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical
protein C26E6.7b protein.
Length = 635
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Frame = -2
Query: 533 WNRDDCILHSFAEVSFGSFR-HFCEHHRADLLREEGLVLTLVCHLDLWFTSI-------T 378
+ + D L S + ++ +F HF EH R LLR L+L+C+ + + T
Sbjct: 250 FQKHDDFLESTSRLTIKNFSCHFDEHQRLKLLRNND--LSLICNYQIGSENTPIFNQRST 307
Query: 377 DNLERPVFHVGL 342
D + RPVF GL
Sbjct: 308 DCMLRPVFIDGL 319
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 415 RVRTRPSSLRRSARWCSQK*RKLP 486
RV RP S+RR WCS+ ++ P
Sbjct: 132 RVCIRPPSMRRRYSWCSENVKRKP 155
>Z71262-7|CAA95811.2| 368|Caenorhabditis elegans Hypothetical
protein F22D6.9 protein.
Length = 368
Score = 27.9 bits (59), Expect = 4.9
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 321 KFEDATVQADMKHWPFEVVSDGGKPKIK-VAYKG--EDKTFFPEEVSSMVLTKMTETAEA 491
+FED + DM WPF D K K + KG + K FP + S + T+
Sbjct: 83 QFEDLKMMMDMNGWPF--TEDEAKEMCKNLLLKGGKDGKQTFPAVLGSGTDRQKTQKNYL 140
Query: 492 YLGKTVQNAVITV 530
+LG V ++
Sbjct: 141 FLGDYVDRGPYSI 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,531,928
Number of Sequences: 27780
Number of extensions: 264306
Number of successful extensions: 763
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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