Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_E20
(487 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.44
Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical pr... 30 1.0
U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein. 30 1.0
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 3.1
Z50070-7|CAA90396.1| 87|Caenorhabditis elegans Hypothetical pr... 28 4.1
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 28 4.1
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 28 4.1
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 27 7.2
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 7.2
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 7.2
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 7.2
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 7.2
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 7.2
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 7.2
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 27 7.2
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 27 9.5
DQ407521-1|ABD85013.1| 870|Caenorhabditis elegans OGA-1d protein. 27 9.5
AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic ... 27 9.5
AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic ... 27 9.5
AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic ... 27 9.5
AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic ... 27 9.5
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.44
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +3
Query: 99 GQAANFAPAHTPGPPQAATQDVSRSPTGEALDVAASAIQ*HCPC 230
GQA PA G P A QD P G A A A +CPC
Sbjct: 234 GQAGPAGPAGPDGQPGQAGQDGEAGPEGNAGQPGADAA--YCPC 275
>Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical protein
F39B2.4b protein.
Length = 1589
Score = 29.9 bits (64), Expect = 1.0
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 25 GSSLLYL--VQMRASAHARETAVPAAGDRRLTLLPHTLRVPLRRRPKTCLVPQLGRLLTS 198
G+ LYL +++ AS H+ ET V AA + + PH RP +V LLT+
Sbjct: 1139 GAQTLYLACIELMASPHSPETLV-AAMINVMQMKPHA-------RPFN-IVNLTALLLTA 1189
Query: 199 PPARYSNTAH 228
PA YSN H
Sbjct: 1190 LPAAYSNALH 1199
>Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical protein
F39B2.4a protein.
Length = 1587
Score = 29.9 bits (64), Expect = 1.0
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 25 GSSLLYL--VQMRASAHARETAVPAAGDRRLTLLPHTLRVPLRRRPKTCLVPQLGRLLTS 198
G+ LYL +++ AS H+ ET V AA + + PH RP +V LLT+
Sbjct: 1137 GAQTLYLACIELMASPHSPETLV-AAMINVMQMKPHA-------RPFN-IVNLTALLLTA 1187
Query: 199 PPARYSNTAH 228
PA YSN H
Sbjct: 1188 LPAAYSNALH 1197
>U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein.
Length = 1587
Score = 29.9 bits (64), Expect = 1.0
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 25 GSSLLYL--VQMRASAHARETAVPAAGDRRLTLLPHTLRVPLRRRPKTCLVPQLGRLLTS 198
G+ LYL +++ AS H+ ET V AA + + PH RP +V LLT+
Sbjct: 1137 GAQTLYLACIELMASPHSPETLV-AAMINVMQMKPHA-------RPFN-IVNLTALLLTA 1187
Query: 199 PPARYSNTAH 228
PA YSN H
Sbjct: 1188 LPAAYSNALH 1197
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = +3
Query: 117 APAHTPGPPQAATQDVSRSPTGEA----LDVAASAIQ*HCPC 230
+PA TPGPP +D P G A D A +CPC
Sbjct: 259 SPAGTPGPPGPPGKDGEAGPDGPAGAPGTDGAPGPDAAYCPC 300
>Z50070-7|CAA90396.1| 87|Caenorhabditis elegans Hypothetical
protein F43G6.7 protein.
Length = 87
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 120 PAHTPGPPQAATQDVSRSPTGEALDVAASAIQ 215
P P PP AA ++ + P A VAA A +
Sbjct: 48 PGQAPDPPAAAQDELEQEPEAVAAPVAAPAAE 79
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 200 GDVKSLPSWGTRHVLG-RRLRGTRSVCGSKVSRLSPAAGTAVSRAWA 63
GD+K L G + +R+ GT+ V GS L PA+G S WA
Sbjct: 345 GDIKDLYEVGKKAAQALKRVYGTKYVVGSGADTLYPASGG--SEDWA 389
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 200 GDVKSLPSWGTRHVLG-RRLRGTRSVCGSKVSRLSPAAGTAVSRAWA 63
GD+K L G + +R+ GT+ V GS L PA+G S WA
Sbjct: 345 GDIKDLYEVGKKAAQALKRVYGTKYVVGSGADTLYPASGG--SEDWA 389
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 99 GQAANFAPAHTPGPPQAATQDVSRSPTG 182
G+A + PA PGPP A D P G
Sbjct: 223 GEAGDAGPAGPPGPPGAPGNDGPPGPPG 250
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 35 SFTSYKCVXXXXXXXXXXXXXXXXXXLCSRTHSGSPSGGDPRRVSF-PNWG 184
++ + KC +C T +G + DPR SF P+WG
Sbjct: 1294 TYGNQKCTSFTYSGCGGNRNRFATQDICENTCNGLMNSNDPRICSFSPDWG 1344
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 35 SFTSYKCVXXXXXXXXXXXXXXXXXXLCSRTHSGSPSGGDPRRVSF-PNWG 184
++ + KC +C T +G + DPR SF P+WG
Sbjct: 1508 TYGNQKCTSFTYSGCGGNRNRFATQDICENTCNGLMNSNDPRICSFSPDWG 1558
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 35 SFTSYKCVXXXXXXXXXXXXXXXXXXLCSRTHSGSPSGGDPRRVSF-PNWG 184
++ + KC +C T +G + DPR SF P+WG
Sbjct: 1644 TYGNQKCTSFTYSGCGGNRNRFATQDICENTCNGLMNSNDPRICSFSPDWG 1694
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 35 SFTSYKCVXXXXXXXXXXXXXXXXXXLCSRTHSGSPSGGDPRRVSF-PNWG 184
++ + KC +C T +G + DPR SF P+WG
Sbjct: 1685 TYGNQKCTSFTYSGCGGNRNRFATQDICENTCNGLMNSNDPRICSFSPDWG 1735
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 35 SFTSYKCVXXXXXXXXXXXXXXXXXXLCSRTHSGSPSGGDPRRVSF-PNWG 184
++ + KC +C T +G + DPR SF P+WG
Sbjct: 1696 TYGNQKCTSFTYSGCGGNRNRFATQDICENTCNGLMNSNDPRICSFSPDWG 1746
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 35 SFTSYKCVXXXXXXXXXXXXXXXXXXLCSRTHSGSPSGGDPRRVSF-PNWG 184
++ + KC +C T +G + DPR SF P+WG
Sbjct: 1697 TYGNQKCTSFTYSGCGGNRNRFATQDICENTCNGLMNSNDPRICSFSPDWG 1747
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 99 GQAANFAPAHTPGPPQAATQDVSRSPTG 182
G+A + PA PGPP A D P G
Sbjct: 223 GEAGDAGPAGPPGPPGAPGNDGPPGPPG 250
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +1
Query: 25 GSSLLYLVQMRASAHARETAVPAAGDRRLTLLPHTLRVPLRRRPKTCLVPQLG 183
G L+Y V+MR A A P AG L + + P T L P +G
Sbjct: 176 GEELIYDVEMRVMATAGLVGFPNAGKSSLLRAISRAKPKVASYPFTTLHPHIG 228
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 26.6 bits (56), Expect = 9.5
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 253 CCACNCSMHGQCYC 212
CC C+C MH +C
Sbjct: 284 CCICHCCMHACMFC 297
>DQ407521-1|ABD85013.1| 870|Caenorhabditis elegans OGA-1d protein.
Length = 870
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 108 ANFAPAHTPGPPQAATQDVSRSPTGEALDVA 200
ANF P HT AA +D+ S EAL VA
Sbjct: 277 ANFVPFHTLSDWNAADRDLRESECCEALLVA 307
>AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform b protein.
Length = 603
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 255 SIHTHA*HARYIGPIRNLFFFFYINI 332
S HT RY ++NLFFFF ++I
Sbjct: 5 SFHTPPLLRRYSSILQNLFFFFLLHI 30
>AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform c protein.
Length = 906
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 255 SIHTHA*HARYIGPIRNLFFFFYINI 332
S HT RY ++NLFFFF ++I
Sbjct: 5 SFHTPPLLRRYSSILQNLFFFFLLHI 30
>AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform a protein.
Length = 1042
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 255 SIHTHA*HARYIGPIRNLFFFFYINI 332
S HT RY ++NLFFFF ++I
Sbjct: 5 SFHTPPLLRRYSSILQNLFFFFLLHI 30
>AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform d protein.
Length = 1044
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 255 SIHTHA*HARYIGPIRNLFFFFYINI 332
S HT RY ++NLFFFF ++I
Sbjct: 5 SFHTPPLLRRYSSILQNLFFFFLLHI 30
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,172,146
Number of Sequences: 27780
Number of extensions: 223911
Number of successful extensions: 669
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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