Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_E18
(460 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 31 0.085
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 29 0.26
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.45
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 29 0.45
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.45
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 0.79
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.79
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 28 0.79
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 28 0.79
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 0.79
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 1.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 1.4
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 27 1.4
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 27 1.8
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 27 1.8
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 1.8
SPBP22H7.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 2.4
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 26 2.4
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 26 2.4
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 26 2.4
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 26 2.4
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 26 3.2
SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyc... 26 3.2
SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces... 26 3.2
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 25 4.2
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 25 4.2
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 25 5.6
SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein Vps1|Schizo... 25 5.6
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 25 5.6
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 25 7.3
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 25 7.3
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 25 7.3
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|... 25 7.3
SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual 25 7.3
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 25 7.3
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 24 9.7
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 24 9.7
SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces pomb... 24 9.7
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 24 9.7
SPCC4B3.17 |cbp3||ubiquinol cytochrome-c reductase assembly prot... 24 9.7
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 31.1 bits (67), Expect = 0.085
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +3
Query: 51 LKAEPVR-PTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPVFRPEPKPFVEEEE 227
++ P++ P Y ++ +NP R P+ + + PLSSRP P P
Sbjct: 327 MQGTPLKLPDVYGGVNASTYNPPR-APLQRTPSGSLTPLSSRPAHTSLPPIPTVQTTSSN 385
Query: 228 IQPVRQYTRPQEPVNRAPVRSAPQQKYTPSNSRQRKPVAQI 350
+ PV RP V + + +P +S +A++
Sbjct: 386 VPPV---NRPSLKSKSPSVSNILSNQLSPISSANNDVMARL 423
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 29.5 bits (63), Expect = 0.26
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +3
Query: 72 PTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPVFRPEPKPFV-EEEEIQPVRQY 248
P+ +P +P P + P KP+PA+ +P+ + P F E+ ++ R
Sbjct: 173 PSSTKP-APDAKEPEFSSP--KPKPAKSEPVKQSKPKATETARPSSFSRNEDRVKMNRMR 229
Query: 249 TRPQEPVNRAPVRSAPQQKYTPSNSRQRKPVAQIIRKYREE 371
R E + + R+A T N V + +KY++E
Sbjct: 230 LRIAERLKESQNRAA---SLTTFNECDMSAVVALRKKYKDE 267
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 0.45
Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 3/112 (2%)
Frame = +3
Query: 51 LKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPVFRPEPKPFVE-EEE 227
L A ++P Q SP P N + PV P +IQP P +
Sbjct: 1245 LAALGIKPRQKGTPSPAPVNSATSTPVAAPTAQQIQPGKQASAVSSNVPAVSASISTPPA 1304
Query: 228 IQPVRQYTRPQEPVNRAPVR--SAPQQKYTPSNSRQRKPVAQIIRKYREENP 377
+ P Q+ +P + + A V+ S + + Q+ P+ K E P
Sbjct: 1305 VVPTVQHPQPTKQIPTAAVKDPSTTSTSFNTAPIPQQAPLENQFSKMSLEPP 1356
Score = 26.2 bits (55), Expect = 2.4
Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 5/122 (4%)
Frame = +3
Query: 24 PYPPSTPTVLKAEPVRPTQYRPLSP-QPFNP--VRNEPVNKPQPARIQPLSSRPQRPVFR 194
P P P+ + V P ++P QP P V N P PA P+S P
Sbjct: 1433 PTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNV 1492
Query: 195 PEPK--PFVEEEEIQPVRQYTRPQEPVNRAPVRSAPQQKYTPSNSRQRKPVAQIIRKYRE 368
P P P V ++ V T P + P +S+ +P+ + P A +
Sbjct: 1493 PVPSMIPSVAQQPPSSVAPATAPSSTL--PPSQSSFAHVPSPAPPAPQHPSAAALSSAPA 1550
Query: 369 EN 374
+N
Sbjct: 1551 DN 1552
Score = 26.2 bits (55), Expect = 2.4
Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = +3
Query: 27 YPPSTPTVLKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPVFRPE-- 200
+P STP V P P P P V P P PA P + P P
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG-PPSAPPPPLPASSAPSV 1743
Query: 201 PKPFVEEEEIQPVRQYTRPQEPV 269
P P +Q + TR ++ V
Sbjct: 1744 PNPGDRSALLQQIHTGTRLKKTV 1766
Score = 25.0 bits (52), Expect = 5.6
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +3
Query: 90 LSPQPFNPVRNEPVNKPQPAR-IQPLSSRPQRPVFRPEPKPFVEEEEIQPVRQYTRPQEP 266
+ QPF P PQP +QP + P P+P +++ + P + +PQ+
Sbjct: 193 MQTQPFGAA---PSFAPQPTGFVQPQQTGVVMP---PQPTGYLQAQPTGPFASFVQPQQT 246
Query: 267 VNRAPVRS--APQQKYTPSNSR 326
+ P PQ+ NS+
Sbjct: 247 ASFMPAAQPLKPQKTGQIHNSK 268
>SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1150
Score = 28.7 bits (61), Expect = 0.45
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 246 YTRPQEPVNRAPVRSAPQQKYTPSNSRQRKPVAQIIRKYREENPDGS 386
Y R +E +++ + K+T S R+R+P+ ++ + P GS
Sbjct: 1066 YKRCEEIISQMSLDERNTPKHTASTKRKRQPIRRVTTNLTSDVPSGS 1112
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 0.45
Identities = 32/117 (27%), Positives = 43/117 (36%), Gaps = 8/117 (6%)
Frame = +3
Query: 30 PPSTPTVLKAEPVRPTQYRPLSPQPFNPVRNE--PVNKPQPARIQPLSSRPQRPVFRPEP 203
P P + P P P P P V P P P + SR P + EP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Query: 204 KPFVEE----EEIQPVRQYTRPQEPVNRAPVRSAPQQKYT--PSNSRQRKPVAQIIR 356
+P ++E EE + + R Q R+A +KYT PS KP + R
Sbjct: 802 EPKIDETSLTEEQKIQLEEARKQRKAADDAARAA-IEKYTSIPSLRDLHKPTRPLKR 857
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 0.79
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 18 PSPYPPSTPTVLKAEPVRPTQYRPLSPQPFN-PVRNEPVNKPQPARIQPLS 167
P P P L EP P + P P P P+ NEPV + + PLS
Sbjct: 108 PLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVPETNCHKESPLS 158
Score = 26.6 bits (56), Expect = 1.8
Identities = 22/95 (23%), Positives = 33/95 (34%)
Frame = +3
Query: 33 PSTPTVLKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPVFRPEPKPF 212
P ++ EP+ P P P P+ EP +P +PL P P EP P
Sbjct: 92 PLLNELVPEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP---NEPVPE 148
Query: 213 VEEEEIQPVRQYTRPQEPVNRAPVRSAPQQKYTPS 317
+ P+ T + N + + PS
Sbjct: 149 TNCHKESPLSDETVSETSKNDTSNSPTNENQAQPS 183
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 0.79
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Frame = +3
Query: 24 PYPPSTPT--VLKAEPVRP-TQYRPLSPQPFNPVR--NEPVNKP---------QPARIQP 161
P PP+ P V++ P P T+ + +PQ F+ N+PV +P +PAR+
Sbjct: 903 PAPPAAPAKEVVEKAPSPPATRPKSTTPQKFDDDAWANKPVTEPPVRASSVTVEPARVTE 962
Query: 162 ------LSSRPQRPVF--RPEPKPFVEEEEIQPVRQYTRPQEPVNRAPVRSAPQQKYTPS 317
+S ++P RP P E EE + + E +AP+ + P T
Sbjct: 963 SMNKMNISEEAKKPEAPSRPRTAPIPEPEEQKKAPVEKKDAEKSVQAPIPAQPTGNITIQ 1022
Query: 318 NS 323
N+
Sbjct: 1023 NA 1024
Score = 27.5 bits (58), Expect = 1.0
Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 3/111 (2%)
Frame = +3
Query: 9 NFNPSPYPPSTPTV--LKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQR 182
++NP P PP P V A+ P Y S + +P P P+ A PL + P
Sbjct: 186 DYNPPPPPPPPPAVEDQAADANEPDDYYS-SGRAVSP-EIPPTYTPKQA--DPLPAPPPP 241
Query: 183 PVFRPEPKPFVEEEEIQPVRQYTRPQEPVNRAPVRSAPQQ-KYTPSNSRQR 332
P P+ + P R VN P + P Q P+N+ R
Sbjct: 242 PPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPTNASTR 292
Score = 25.4 bits (53), Expect = 4.2
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Frame = +3
Query: 12 FNPSPYP-PSTPT-VLKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSR--PQ 179
F P P P PT ++ PV+ T Y+PL QP + PQ + P + PQ
Sbjct: 1048 FQPPPSALPIQPTGYMQPIPVQATGYQPLMVQPTGLQPHMTGVMPQVTGVMPQMTGVVPQ 1107
Query: 180 RPVFRPEPKPFVEEEEIQPVRQYTRPQEPVN 272
P + +Q + PQ+PVN
Sbjct: 1108 MTGVMP------QMTGVQVQKTGAMPQQPVN 1132
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 27.9 bits (59), Expect = 0.79
Identities = 22/90 (24%), Positives = 31/90 (34%)
Frame = +3
Query: 21 SPYPPSTPTVLKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPVFRPE 200
S +P S KA V +Q + +P+ P P P+P +RP P P
Sbjct: 396 SDHPSSQDNSSKASLVENSQTQSSTPRKPLPTTTSPKVNPEPHSESISDTRPSTPRKVPP 455
Query: 201 PKPFVEEEEIQPVRQYTRPQEPVNRAPVRS 290
++Q T P P P S
Sbjct: 456 STVPKMNPKLQGGNSVTAPSTPSKVLPAMS 485
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 27.9 bits (59), Expect = 0.79
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 12 FNPSPYPPSTPTVLKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPVF 191
++ +PYPP+ PT + +P + P P N KP P + +RPQ +
Sbjct: 67 YSQAPYPPARPTSQRPNSWQPGNASTMYASP-PPSSNYNTAKP-PYQTSQFYARPQSS-Y 123
Query: 192 RPEP 203
P P
Sbjct: 124 APPP 127
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 0.79
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +3
Query: 18 PSPYPPSTPTVLKAEPVRPTQYRPLSPQPFNPVRNEPVNK-----PQPARIQPLSSRPQR 182
P P P STP V K+ P+ P+ P P + + + P P P+ I P+ P+
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPV-PAPSSEIPSIPAPSGAPPVPAPSGIPPV---PKP 1097
Query: 183 PVFRPE-PKPFV 215
V P PKP V
Sbjct: 1098 SVAAPPVPKPSV 1109
Score = 25.0 bits (52), Expect = 5.6
Identities = 28/102 (27%), Positives = 34/102 (33%), Gaps = 3/102 (2%)
Frame = +3
Query: 18 PSPYPPSTPTVLKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPV--- 188
P P P P V K P+ P P+P V P P +P + P PV
Sbjct: 1084 PVPAPSGIPPVPK-----PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 189 FRPEPKPFVEEEEIQPVRQYTRPQEPVNRAPVRSAPQQKYTP 314
P PKP V + +P AP AP P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Score = 24.6 bits (51), Expect = 7.3
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +3
Query: 24 PYPPSTPTVLKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPVFRPEP 203
P P + P++ PV P S P + + P++K P+S+ P P+ R P
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSK-------PVSTSPAAPLARVPP 1013
Query: 204 KP 209
P
Sbjct: 1014 VP 1015
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 27.5 bits (58), Expect = 1.0
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = +3
Query: 18 PSPYPPSTPTVLKAEPVRPTQYRPLSPQPFNPV--RNEPVNK-PQPARIQPLSSRPQRPV 188
P Y P ++ A P Q+ L Q P+ N+P+ + P P + P P +
Sbjct: 113 PQQYRQLPPNMVAATNA-PQQHPQL--QRMMPILSSNQPIQQLPLPNQASPYIPVPLQQQ 169
Query: 189 FRPEPKPFVEEEEIQPVRQYTRPQEPVNRAPVRSAPQQKYTPSNSRQRKPVAQII 353
+ +P+ ++++ Q +Q PQ+P+ + QQ+ +S ++PV+ I+
Sbjct: 170 QQSQPQQQPQQQQHQQPQQPQPPQQPLQQ-------QQQQRQLHSGIQQPVSTIV 217
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 1.4
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 18 PSPYPPSTPTVLKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQP---ARIQ--PLSSRPQR 182
P P PPS TV + P P RP++P NP N P P +R+ L++ +R
Sbjct: 255 PIP-PPSNGTV-SSPPNSPP--RPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 183 PVFRPEP 203
P P P
Sbjct: 311 PPPPPPP 317
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 27.1 bits (57), Expect = 1.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 21 SPYPPSTPTVLKAEPVRPTQYRPLSPQPFNPVRNEPVNK 137
+P P S + P + PLSP F +R+ VNK
Sbjct: 49 TPEPSSNTFYAPSSPASAVRREPLSPMSFVRMRSHRVNK 87
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 26.6 bits (56), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 204 KPFVEEEEIQ-PVR-QYTRPQEPVNRAPVRSAPQQKYTP 314
KPF+E+ + P + + + QEP +++P+ P+ Y P
Sbjct: 868 KPFIEKASMHAPAKGRNSSMQEPSSKSPLLKTPKSNYFP 906
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 26.6 bits (56), Expect = 1.8
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Frame = +3
Query: 72 PTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSS-RPQRPV-----FRPEPKPFVEEEEIQ 233
P Y PLSP P P P R+ + RPQ P+ + P P+ + +I
Sbjct: 208 PEPYLPLSP------TRSPARTPSPIRLYSSDALRPQSPLSPSVEYLTPPNPYSLKSDIS 261
Query: 234 PVRQYTRPQEPV 269
RQ P+ PV
Sbjct: 262 STRQL--PKIPV 271
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.6 bits (56), Expect = 1.8
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = +3
Query: 72 PTQYRPLS--PQPFNPVRNEPVNKPQPARIQPLSSRPQRPVFRPEPKPFVEEEEIQ-PVR 242
PT Y S PF + P++ P P Q PV RP P P V +
Sbjct: 120 PTSYHACSNNQSPFPHSHHPPLHNPLPVSCQ--------PVLRPPPVPQVPSHWYPVSLP 171
Query: 243 QYTRPQEPVNRAPV 284
P +P+++ PV
Sbjct: 172 SPNLPHQPISKPPV 185
>SPBP22H7.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 181
Score = 26.2 bits (55), Expect = 2.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 216 EEEEIQPVRQYTRPQEPVNRAPVRSAPQQKYTP 314
E E+++PV +P + V+ V+ ++KY+P
Sbjct: 44 ESEDLEPVGHDIQPMDSVSDFHVKDFSEKKYSP 76
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 26.2 bits (55), Expect = 2.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 255 PQEPVNRAPVRSAPQQKYTPSNSRQRKPVAQIIRKY 362
PQ+ R +RS P PS++ QR+P A +R +
Sbjct: 276 PQQTPARPSLRSVPSY---PSSNNQRRPSASRVRSF 308
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 26.2 bits (55), Expect = 2.4
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = +3
Query: 15 NPSPYPPSTPTVLKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPVFR 194
N P P+TP K P R Q ++P+ N N P P + L S P R +F
Sbjct: 90 NKKPKLPTTPQTPKT-PKRTIQI--VTPKSLNRTCN-----PVPFATRLLQSTPHRQLFP 141
Query: 195 PEP 203
P P
Sbjct: 142 PTP 144
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 26.2 bits (55), Expect = 2.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 159 PLSSRPQRPVFRPEPKPFVEEEEIQPVR 242
P+ + QR +P P+P V+ E +PVR
Sbjct: 710 PIQNVEQRATHKPLPRPPVQVETREPVR 737
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 26.2 bits (55), Expect = 2.4
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +3
Query: 18 PSPYPPSTPTVLKAEPVRPTQY---RPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPV 188
PSP PPS P+ + TQ+ + L+ Q V +P + I+ + R +
Sbjct: 835 PSPVPPSRPSANPYLLYQKTQWHVCKTLADQDKQRVTGDPEARATKNEIRAKLGKTWRAL 894
Query: 189 FRPEPKPFVEEEEIQPVRQYTRPQE 263
+P+V+E + TR +E
Sbjct: 895 DSLGKQPWVDEINARRANYSTRLEE 919
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 25.8 bits (54), Expect = 3.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 165 SSRPQRPVFRPEPKPFVEEEEIQ-PVRQYTRPQEPVNRAPVRSAPQQKY 308
SSR +RPV+R ++E EI P ++ ++P P + V S + Y
Sbjct: 104 SSRAKRPVYRDFSYTEIDEHEIPIPKKRKSKP-APKQKKSVASDDEDAY 151
>SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1050
Score = 25.8 bits (54), Expect = 3.2
Identities = 12/58 (20%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 228 IQPVRQYTRPQEPVNRA-PVRSAPQQKYTPSNSRQRKPVAQIIRKYREENPDGSITWG 398
++ R++ QE + + P+ PQQ Y ++ + P+++ + E P+ ++ G
Sbjct: 21 VRKSRRFWETQENLESSTPLLQEPQQSYRSNSFNELPPLSRSVTFAENEQPNEAVKLG 78
>SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 475
Score = 25.8 bits (54), Expect = 3.2
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Frame = +3
Query: 162 LSSRPQRPVFRPEPKPFVEEEEIQPVRQYTRPQEPVN--------RAPVRSAPQQKYTPS 317
+ ++PQ+ F+ F QPV +T +PVN A PQ + P
Sbjct: 316 IQNQPQQSAFQNLNTQFSLPNNSQPVFGHTSLTQPVNPNGFTVQPPATFMQQPQGPFVPP 375
Query: 318 NSRQRKPVAQIIRK 359
N+ P A + K
Sbjct: 376 NTTFESPFANVTSK 389
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 25.4 bits (53), Expect = 4.2
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Frame = +3
Query: 12 FNPSPYPPSTPTVLKAE----PVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQ 179
F + + P+ PT + +E P RP P PV+ +P QP+ +P
Sbjct: 336 FTANRFSPAAPTTVSSERNAPPYPSAPTRPTPPTVQTSSSAAPVDSAEPVAYQPI-KKPI 394
Query: 180 RPV 188
P+
Sbjct: 395 DPM 397
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.4 bits (53), Expect = 4.2
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +3
Query: 54 KAEPVRPTQYRPLSPQPFNPVRNEPVNKPQ---PARIQPLSSRPQRPVFRPEPKPFVEEE 224
K EP R T P +P PV +P+ P P + P S +P P P +
Sbjct: 27 KREPAR-TVSTPAFMEPA-PVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPPTHQR 84
Query: 225 EIQPVR 242
E PV+
Sbjct: 85 EASPVK 90
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 25.0 bits (52), Expect = 5.6
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +3
Query: 15 NPSPYPPSTPTVLKAEPVRPTQYRPL--SPQPFN 110
N SPYPPS +V Y P+ P+ FN
Sbjct: 203 NTSPYPPSNSSVTALPKPSKIAYIPVLSKPKSFN 236
>SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein
Vps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 25.0 bits (52), Expect = 5.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 3 TRNFNPSPYPPSTPTVLKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQP 161
++N P P P T L PV P + S Q F NK + A ++P
Sbjct: 521 SQNSKPIPVDPKTGKALTNNPVPPVETSSSSGQNFFGSFFGSKNKKRLAAMEP 573
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 25.0 bits (52), Expect = 5.6
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 282 VRSAPQ--QKYTPSNSRQRKPVAQIIRKYRE 368
VR A Q ++ SR R+PV QI+ K++E
Sbjct: 582 VRMAQQKAEQLDEERSRLREPVQQIVNKWKE 612
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 24.6 bits (51), Expect = 7.3
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 183 PVFRPEPKPFVEEEEIQPVRQYTRPQEPVNRAPVRSA 293
P F+ + +P EE ++ R+ + Q+P R RS+
Sbjct: 87 PTFKKKQEPNTIEENLEVPRKVRKEQKPRRRRGKRSS 123
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 24.6 bits (51), Expect = 7.3
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 10/56 (17%)
Frame = +3
Query: 3 TRNFNPSPY------PPSTPTVLKAEPVRP----TQYRPLSPQPFNPVRNEPVNKP 140
T +P PY PPST E T P S + NPV N N P
Sbjct: 584 THGISPQPYAGASLIPPSTGAAFNNETASSNAGETTALPYSSRFMNPVENRSANSP 639
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 24.6 bits (51), Expect = 7.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 72 PTQYRPLSPQPFNPVRNEPVNKPQP 146
P+ P+ P PF+P RN + P P
Sbjct: 454 PSYPYPMFPAPFSPPRNAMMPIPAP 478
>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 278
Score = 24.6 bits (51), Expect = 7.3
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 12 FNPSPYPPSTPTVLKAEPVRPTQYRPLSPQPFN 110
F P P PPS P K +P P+ P N
Sbjct: 36 FTPCPVPPSFPKASKPNSNQPYPNGPVCIYPPN 68
>SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 24.6 bits (51), Expect = 7.3
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 192 RPEPKPFVEEEEIQPVRQYTRPQEPVNRAPVRSAPQQKYTPS 317
RPEP+ +++++ +P PVRSA P+
Sbjct: 20 RPEPRTSKDQQKLSISTDVKKPSHSAPVTPVRSARSSMEQPT 61
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 24.6 bits (51), Expect = 7.3
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 9 NFNPSPYPPSTPTVLKAEPVRPTQYRPLSPQPFN-PVRNEPVNKPQ 143
N +PS PP PT + + P R +P P + V E KP+
Sbjct: 582 NASPSVIPPRVPTPVPGRTLSPKPTRIPTPIPSSLNVSLESSKKPE 627
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 24.2 bits (50), Expect = 9.7
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 15 NP-SPYPPSTPTVLKAEPVRPTQYRPLSPQP 104
NP + +P S + K PV+ + + P +P P
Sbjct: 264 NPHNSFPASADRLQKNHPVQSSNFNPYTPAP 294
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 24.2 bits (50), Expect = 9.7
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +3
Query: 300 QKYTPSNSRQRKPVAQIIRKYREENPDGSITWGFENDD 413
++Y P ++ + Q Y E+ PDG+ G +D+
Sbjct: 67 EEYLPKRTKIERDGKQTKEPYDEDIPDGTEQEGLSDDE 104
>SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 202
Score = 24.2 bits (50), Expect = 9.7
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +3
Query: 213 VEEEEIQPVRQYTRPQEPVNRAPVRSAPQQKYTPSNSRQRKPVAQIIRKYREENPDGSIT 392
V +EE++ QY +P+ +RS +Q+ + + IR+ EEN +
Sbjct: 95 VAQEELRKREQYDELAKPIMSKGLRSRTEQQESIGK------LQDAIRELEEENANYVKA 148
Query: 393 WGFEND 410
W D
Sbjct: 149 WNLRKD 154
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 24.2 bits (50), Expect = 9.7
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +1
Query: 283 SEVHHNRNTHHQIPGKGNP*LKSFANTGKKILMVALPGDSRTTMARSTKRLLVLT 447
SE+ + ++++ +P + FA +K +P D+ T +TKR L T
Sbjct: 766 SEIKDSVSSNNAVPSSTFNFVSPFAAVSEKTNENNIPNDTTKTNGNATKRTLEQT 820
>SPCC4B3.17 |cbp3||ubiquinol cytochrome-c reductase assembly protein
Cbp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 283
Score = 24.2 bits (50), Expect = 9.7
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 9 NFNPSPYPPSTPTVLKA-EPVRPTQYRPLSPQPFNPVRNEPVN 134
+F+P +P+ K +PV +Y+PL+P P +P + P N
Sbjct: 33 SFSPINVINHSPSETKRRDPVEELRYKPLTP-PQDPRKVAPPN 74
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,865,473
Number of Sequences: 5004
Number of extensions: 42895
Number of successful extensions: 201
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 172312850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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