BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_E18
(460 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 36 2e-04
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 36 2e-04
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 33 0.001
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 33 0.002
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 0.91
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 22 3.7
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 22 3.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 3.7
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 3.7
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 22 3.7
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 3.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 3.7
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.5
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 36.3 bits (80), Expect = 2e-04
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Frame = +3
Query: 63 PVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSR---PQ------RPVFRPEPKPFV 215
P RPT+ R + P N PV PQP P R P+ RPV+ P+P+P
Sbjct: 25 PTRPTRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP-- 82
Query: 216 EEEEIQPVRQYTRPQEPVNRAPVRSAPQQKYTPSNSRQRKPVAQ 347
++ R+ EP N PV + + P R+ +P A+
Sbjct: 83 PHPRLR--REAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAE 124
Score = 32.7 bits (71), Expect = 0.002
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Frame = +3
Query: 48 VLKAEPVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSR---PQ------RPVFRPE 200
+ + P P R P+ P N PV PQP P R P+ RPV+ P+
Sbjct: 161 ISQPRPPHPRLRREAEPEA-EPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQ 219
Query: 201 PKPFVEEEEIQPVRQYTRPQ-EPVNRAPVRSAPQQKYTPSNSRQRKPVAQ 347
P+P +R+ P+ EP N PV + P R+ KP A+
Sbjct: 220 PRP-----PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAK 264
Score = 29.9 bits (64), Expect = 0.014
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Frame = +3
Query: 18 PSPYPPSTPTVLKAE-PVRPTQYRPL---SPQPFNP-VRNEPVNKPQPARIQPLSSRPQR 182
P P PP +AE P RP+ P+P +P +R E + +P R
Sbjct: 78 PQPRPPHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEPGN--------NR 129
Query: 183 PVFRPEPKPFVEEEEIQPVRQYTRPQEPVNRAPVRSAPQQKYTPSNSRQRKPVAQ 347
PV+ P+P+P ++ R+ EP N PV + + P R+ +P A+
Sbjct: 130 PVYIPQPRP--PHPRLR--REAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAE 180
Score = 27.5 bits (58), Expect = 0.074
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Frame = +3
Query: 63 PVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQP---LSSRPQ------RPVFRPEPKP 209
P P R P+ P N PV PQP P ++P+ RPV+ P+P+P
Sbjct: 222 PPHPRLRREAEPEA-EPGNNRPVYIPQPRPPHPRLRREAKPEAKPGNNRPVYIPQPRP 278
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 36.3 bits (80), Expect = 2e-04
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Frame = +3
Query: 63 PVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSR---PQ------RPVFRPEPKPFV 215
P RPT+ R + P N PV PQP P R P+ RPV+ P+P+P
Sbjct: 26 PTRPTRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP-- 83
Query: 216 EEEEIQPVRQYTRPQ-EPVNRAPVRSAPQQKYTPSNSRQRKPVAQ 347
+R+ P+ EP N PV + P R+ +P A+
Sbjct: 84 ---PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAE 125
Score = 27.1 bits (57), Expect = 0.097
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Frame = +3
Query: 63 PVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSR---PQ------RPVFRPEPKP 209
P P R P+ P N PV PQP P R P+ RPV+ P+P+P
Sbjct: 83 PPHPRLRREAEPEA-EPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 139
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 33.1 bits (72), Expect = 0.001
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Frame = +3
Query: 63 PVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPVFRPEPKPFVEEEEIQPVR 242
P RP + R + P N P+ PQP RP P R E +P E +P+
Sbjct: 26 PTRPARLRREAKPEAEPGNNRPIYIPQP--------RPPHPRLRREAEPKAEPGNNRPI- 76
Query: 243 QYTRPQEPVNRAPVRSAPQQKYTPSNSR-----QRKPVAQIIRKYREENP 377
+P+ P R +R + + P N+R Q +P +R+ E P
Sbjct: 77 YIPQPRPPHPR--LRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEP 124
Score = 29.1 bits (62), Expect = 0.024
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 23/87 (26%)
Frame = +3
Query: 18 PSPYPPSTPTVLKAEP-VRPTQYRPLS-PQP--------------FNPVRNEPVNKPQPA 149
P P PP +AEP P RP+ PQP P N PV PQP
Sbjct: 51 PQPRPPHPRLRREAEPKAEPGNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPR 110
Query: 150 RIQP-LSSRPQ------RPVFRPEPKP 209
P L P+ RPV+ P+P+P
Sbjct: 111 PPHPRLRREPEAEPGNNRPVYIPQPRP 137
Score = 27.5 bits (58), Expect = 0.074
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
Frame = +3
Query: 69 RPTQYRPLSPQPFNPVRNEPVNKPQPARIQP-LSSRPQ------RPVFRPEPKP 209
RP R P N PV PQP P L P+ RPV+ P+P+P
Sbjct: 110 RPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRP 163
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 32.7 bits (71), Expect = 0.002
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
Frame = +3
Query: 63 PVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSR---PQ------RPVFRPEPKPFV 215
P P R P+ P N PV PQP P R P+ RPV+ P+P+P
Sbjct: 54 PPHPRLRREAEPEA-EPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP-- 110
Query: 216 EEEEIQPVRQYTRPQ-EPVNRAPVRSAPQQKYTPSNSRQRKPVAQ 347
+R+ P+ EP N PV + P R+ KP A+
Sbjct: 111 ---PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAE 152
Score = 31.9 bits (69), Expect = 0.003
Identities = 28/88 (31%), Positives = 36/88 (40%)
Frame = +3
Query: 63 PVRPTQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSRPQRPVFRPEPKPFVEEEEIQPVR 242
P P R P+ P N PV PQP RP P R E KP E +PV
Sbjct: 110 PPHPRLRREAEPEA-EPGNNRPVYIPQP--------RPPHPRLRREAKPEAEPGNNRPV- 159
Query: 243 QYTRPQEPVNRAPVRSAPQQKYTPSNSR 326
+P+ P R + P+ + P N+R
Sbjct: 160 YIPQPRPPHPRLRREAEPEAE--PGNNR 185
Score = 28.7 bits (61), Expect = 0.032
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Frame = +3
Query: 75 TQYRPLSPQPFNPVRNEPVNKPQPARIQPLSSR---PQ------RPVFRPEPKPFVEEEE 227
T+ R + P N PV PQP P R P+ RPV+ P+P+P
Sbjct: 1 TRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP-----P 55
Query: 228 IQPVRQYTRPQ-EPVNRAPVRSAPQQKYTPSNSRQRKPVAQ 347
+R+ P+ EP N PV + P R+ +P A+
Sbjct: 56 HPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAE 96
Score = 27.5 bits (58), Expect = 0.074
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 18 PSPYPPSTPTVLKAEP-VRPTQYRPLS-PQPFNPVRNEPVNKPQPARIQPLSSRPQRPVF 191
P P PP +A+P P RP+ PQP P + + + +P ++RP V+
Sbjct: 134 PQPRPPHPRLRREAKPEAEPGNNRPVYIPQPRPP--HPRLRREAEPEAEPGNNRP---VY 188
Query: 192 RPEPKP 209
P+P+P
Sbjct: 189 IPQPRP 194
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 23.8 bits (49), Expect = 0.91
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 117 RNEPVNKPQPARIQPLSSRPQRPVFRPEPKPFVEEEE 227
R+EPV P+ PL +P+ + PK EE
Sbjct: 334 RSEPVEPPRRKNNCPLHCKPELGQSQSSPKFVARREE 370
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 21.8 bits (44), Expect = 3.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 330 RKPVAQIIRKYREENPDGSITWGFEND 410
R + +RK + DG I WG +D
Sbjct: 312 RADLEATLRKITDLGADGFIIWGSSDD 338
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 21.8 bits (44), Expect = 3.7
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -2
Query: 318 LMVCISVVVHF*LELDLQVLAVLCI 244
+ VC+ + H L+ +Q L +C+
Sbjct: 10 ICVCVGAMTHEELKTGIQTLQPICV 34
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 3.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 123 EPVNKPQPARIQPLSSRPQRPVFRPEPKPF 212
E VN+ + PL+ P+R F KPF
Sbjct: 510 ELVNERADMIVAPLTINPERAEFIEFSKPF 539
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.8 bits (44), Expect = 3.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -3
Query: 215 DERLRLWSKNRPLGSTGQR 159
DE L W K P+G G R
Sbjct: 172 DELLGEWEKRAPMGFYGTR 190
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 21.8 bits (44), Expect = 3.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -3
Query: 215 DERLRLWSKNRPLGSTGQR 159
DE L W K P+G G R
Sbjct: 172 DELLGEWEKRAPMGFYGTR 190
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.8 bits (44), Expect = 3.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -3
Query: 215 DERLRLWSKNRPLGSTGQR 159
DE L W K P+G G R
Sbjct: 172 DELLGEWEKRAPMGFYGTR 190
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 3.7
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +1
Query: 286 EVHHNRNTHHQIPGKGNP 339
++HH+++TH Q + P
Sbjct: 813 QLHHHQSTHPQAQAQAQP 830
Score = 21.8 bits (44), Expect = 3.7
Identities = 17/91 (18%), Positives = 35/91 (38%)
Frame = +3
Query: 135 KPQPARIQPLSSRPQRPVFRPEPKPFVEEEEIQPVRQYTRPQEPVNRAPVRSAPQQKYTP 314
+PQ + Q +PQ+ +P+ + +++ Q +Q Q+ V Q
Sbjct: 1504 QPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEYGAVSGLVVQLQRG 1563
Query: 315 SNSRQRKPVAQIIRKYREENPDGSITWGFEN 407
NS + Q + +++ G G E+
Sbjct: 1564 YNSGNNRSGEQANSQQQQQQQSGEPVIGMED 1594
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 292 ALLTGARFTGSC 257
+L GARF GSC
Sbjct: 423 SLADGARFGGSC 434
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 292 ALLTGARFTGSC 257
+L GARF GSC
Sbjct: 423 SLADGARFGGSC 434
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,653
Number of Sequences: 438
Number of extensions: 3558
Number of successful extensions: 46
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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