Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_E17
(217 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0470 - 23183925-23184743,23184929-23185153 33 0.041
07_03_1189 + 24681067-24681588 29 0.67
03_02_0885 - 12169913-12170497,12170593-12170943 29 0.67
01_01_0784 + 6068230-6068580,6068676-6069127,6070208-6070736 29 0.67
11_02_0070 - 8004397-8004645,8004796-8004961,8005039-8005793 28 0.89
09_04_0469 + 17864265-17864789,17865648-17865854,17865936-178661... 28 0.89
05_01_0281 + 2186500-2187435,2187518-2187616,2187707-2187772,218... 28 1.2
12_02_0828 - 23502276-23503472,23503568-23504002,23504097-235042... 27 1.6
04_01_0314 - 4243928-4244361,4245178-4245415 27 1.6
03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427 27 1.6
02_04_0203 - 20888010-20888162,20888242-20888469,20888969-208890... 27 1.6
01_07_0383 - 43195095-43195322,43195408-43195638,43196134-431964... 27 1.6
09_02_0310 - 7162798-7163187 27 2.1
08_02_0081 + 12036100-12036405 27 2.1
02_05_0946 + 32995427-32996149 27 2.1
12_01_0672 + 5731288-5731356,5732032-5732117,5732634-5732724,573... 27 2.7
09_06_0316 + 22262652-22263872 27 2.7
06_03_0595 - 22605177-22605536 27 2.7
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 27 2.7
06_01_0994 + 7719974-7721323 27 2.7
01_02_0083 - 10959091-10959222,10959318-10959501,10959935-109600... 27 2.7
08_02_0092 + 12265446-12265809,12266147-12266743,12266792-122668... 26 3.6
04_03_0816 + 19992641-19993197,19994933-19995023,19997761-19998051 26 3.6
06_02_0175 - 12624608-12625297 26 4.8
05_04_0146 + 18393447-18394043 26 4.8
04_01_0037 + 444239-444667,444817-444825 26 4.8
03_01_0648 - 4749150-4749275,4749902-4749986,4750761-4750861,475... 26 4.8
01_06_1833 + 40208360-40208587,40208677-40209024,40209101-40209676 26 4.8
01_06_0941 + 33198528-33198778,33199216-33199288,33199405-331994... 26 4.8
09_02_0100 + 4285475-4285760,4286179-4286285 25 6.3
08_02_1182 + 24992256-24992708,24992942-24993238 25 6.3
08_02_0983 - 23281787-23281931,23282045-23282163,23282765-232828... 25 6.3
05_03_0281 + 11560402-11560569,11561373-11561579,11562966-115631... 25 6.3
04_04_1574 - 34536744-34537136,34541247-34541405,34541497-345424... 25 6.3
02_05_0296 + 27639981-27640766 25 6.3
01_01_0840 - 6557931-6558377 25 6.3
11_06_0573 + 25088921-25089035,25089752-25089843,25089990-25091672 25 8.3
11_04_0355 + 16705281-16706006 25 8.3
11_04_0334 - 16489768-16489796,16490588-16490936 25 8.3
08_02_0936 - 22771416-22771702,22772297-22772393,22772951-22773847 25 8.3
08_02_0159 + 13403198-13403581 25 8.3
07_03_1591 + 27967065-27967090,27967236-27968054,27984940-279850... 25 8.3
07_01_0528 - 3919291-3919556,3919623-3919686 25 8.3
06_02_0009 + 10561257-10561751 25 8.3
05_01_0557 - 4879244-4879666 25 8.3
03_05_1062 - 30043596-30043811,30044083-30044178,30044387-300444... 25 8.3
01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480 25 8.3
>02_04_0470 - 23183925-23184743,23184929-23185153
Length = 347
Score = 32.7 bits (71), Expect = 0.041
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -1
Query: 202 TSVGVARARPLRSCYTR*RAPHVLWRRAFYRRRELDSGGRRNWWGVSQRRRSVRIPQ 32
+++ R RP R T R H + RRAF R L G RR G S+ R+PQ
Sbjct: 286 STLPTVRLRPSRRPSTPCRGCHDVRRRAFARSGRLHCGRRRALAGSSRLYHGCRVPQ 342
>07_03_1189 + 24681067-24681588
Length = 173
Score = 28.7 bits (61), Expect = 0.67
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 112 RRRELDSGGRRNW-WGVSQRRRSV 44
RRRE SGG R W WG + RRS+
Sbjct: 4 RRREAASGGGRQWRWGHAGWRRSL 27
>03_02_0885 - 12169913-12170497,12170593-12170943
Length = 311
Score = 28.7 bits (61), Expect = 0.67
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 112 RRRELDSGGRRNW-WGVSQRRRSV 44
RRRE SGG R W WG + RRS+
Sbjct: 10 RRREAASGGGRQWRWGHAGWRRSL 33
>01_01_0784 + 6068230-6068580,6068676-6069127,6070208-6070736
Length = 443
Score = 28.7 bits (61), Expect = 0.67
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 112 RRRELDSGGRRNW-WGVSQRRRSV 44
RRRE SGG R W WG + RRS+
Sbjct: 10 RRREAASGGGRQWRWGHAGWRRSL 33
>11_02_0070 - 8004397-8004645,8004796-8004961,8005039-8005793
Length = 389
Score = 28.3 bits (60), Expect = 0.89
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -3
Query: 188 RARSPTAFVLHAVTSTARAVAPCVLSTSGVGQWGAAELVGGITAAAVRPDTAVWVRA 18
RA + A H + S A A +T V +GA GG+T +A R A W A
Sbjct: 4 RAHAHAAVAAHLLVSAFVAAAAAAAATYNVIDYGAVGDDGGVTDSA-RAFEAAWAAA 59
>09_04_0469 +
17864265-17864789,17865648-17865854,17865936-17866175,
17866705-17866771,17866872-17867015,17867202-17867297,
17867818-17867975,17868054-17868190,17868551-17868752
Length = 591
Score = 28.3 bits (60), Expect = 0.89
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 133 LWRRAFYRRRELDSGGRRNW 74
LWR RRREL +GG R W
Sbjct: 52 LWRLQQERRRELVAGGLRRW 71
>05_01_0281 +
2186500-2187435,2187518-2187616,2187707-2187772,
2187850-2188266
Length = 505
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 49 TAAAVIPPTSSAAPHCPTPDVDKTHGATARAVLVTACSTNAVGERARL 192
T A +PP+ + AP P P ATA A + CS N G+R +L
Sbjct: 254 TVAQRLPPSEARAPDAPPP------AATATATTSSVCSGN--GDRRQL 293
>12_02_0828 -
23502276-23503472,23503568-23504002,23504097-23504213,
23505330-23505396,23505685-23505725,23506161-23506237,
23506699-23506945
Length = 726
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 67 PPTSSAAPHCPTPDVDKTHGATARAVLVTACSTNAVGERA 186
PP S P+ PTP + A A+L CS + +R+
Sbjct: 379 PPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRS 418
>04_01_0314 - 4243928-4244361,4245178-4245415
Length = 223
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 125 APQHVRCSSPRVARTQWASARDSHRRFC 208
AP H +SPR+ T W + + + RFC
Sbjct: 46 APPH-SSASPRIEETSWKAEQQASGRFC 72
>03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427
Length = 143
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 55 AAVIPPTSSAAPHCPTPDVDKTHGATARAVLVTACSTNA-VGERARLPQTF 204
A V+PP++ A P + + +T V AC + A V R LP TF
Sbjct: 63 AEVVPPSAGATPGTSPSEAEVVPPSTGGWSCVWACPSGAEVVPRPPLPPTF 113
>02_04_0203 -
20888010-20888162,20888242-20888469,20888969-20889073,
20889148-20889225,20889308-20889382,20890037-20890123,
20890216-20890283,20890396-20890483,20890583-20890683,
20890793-20890913,20891008-20891169,20891271-20891441
Length = 478
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 55 AAVIPPTSSAAPHCPTPDVDKTHGATARAVLVTACSTNAVGERAR 189
AA + P +S +P P+P + + A A CST+A G R R
Sbjct: 6 AASLLPAASPSP-APSPPPPRPRVSAAAAASFPCCSTSAGGLRLR 49
>01_07_0383 - 43195095-43195322,43195408-43195638,43196134-43196454,
43196512-43196589,43196664-43197727,43197813-43198503,
43198743-43199541,43200010-43200158,43200159-43200286,
43200389-43200494,43200835-43200843,43201332-43201821,
43201896-43202554,43203759-43203851,43204044-43204196,
43205092-43205194,43205376-43205467,43206229-43206306,
43206987-43207049,43207339-43207512
Length = 1902
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 134 AVAPCVLSTSGVGQWGAAELVGGITAAAVR 45
++ PC+ S VG W A L GG+ +R
Sbjct: 1680 SLLPCIESLWPVGTWQMASLAGGLYGMMIR 1709
>09_02_0310 - 7162798-7163187
Length = 129
Score = 27.1 bits (57), Expect = 2.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 97 DSGGRRNWWGVSQRR 53
DSGGRR WW +R+
Sbjct: 102 DSGGRRQWWRERKRK 116
>08_02_0081 + 12036100-12036405
Length = 101
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 70 PTSSAAPHCPTPDVDKTH---GATARAVLVTACSTNAVGERARLP 195
P +S++P P D + ATARA + A S VGER + P
Sbjct: 8 PAASSSPSLPCYDGSRPEPRRAATARAPMPLAGSGKLVGEREKEP 52
>02_05_0946 + 32995427-32996149
Length = 240
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 52 AAAVIPPTSSAAPHCPTPDVD 114
AAA PP+S+AA H PD D
Sbjct: 20 AAAASPPSSTAAGHAGEPDDD 40
>12_01_0672 +
5731288-5731356,5732032-5732117,5732634-5732724,
5732886-5732935,5733339-5733408,5733508-5733617,
5733943-5734463,5734856-5734949,5735095-5735225,
5735241-5736274,5736383-5736457,5736615-5737104,
5737375-5738009,5738166-5738378
Length = 1222
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 49 TAAAVIPPTSSAAPHCPTPDVDKT 120
+A A PP +S AP+ PTP + T
Sbjct: 646 SAVAGCPPNNSKAPNKPTPGTETT 669
>09_06_0316 + 22262652-22263872
Length = 406
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 64 IPPTSSAAPHCPTPDVDKTHGATARAVLVTACSTNA 171
IP +++ P C TP T A+L T +TNA
Sbjct: 12 IPRSTAIRPPCATPFSRAHWQTTCAAILATTTTTNA 47
>06_03_0595 - 22605177-22605536
Length = 119
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 64 IPPTSSAAPHCPTPDVDKTHGATARAVLVTACSTNAVGE 180
+PPT+ A TP + G T R L A + + VG+
Sbjct: 22 LPPTADAGSAAGTPPMPDRRGNTRRCRLPAANAQSVVGD 60
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 43 GRTAAAVIPPTSSAAPHCPTP 105
G A +V P SS+APH PTP
Sbjct: 1712 GIPAHSVHEPVSSSAPHPPTP 1732
>06_01_0994 + 7719974-7721323
Length = 449
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 152 VTSTARAVAPCVLSTSGVGQWGAAELVGGITAAAVRPDTA 33
V + AR V VG+ A E+V G++AAA R D A
Sbjct: 106 VANRARGVERVPTPRVPVGEDDAEEVVAGVSAAARRGDAA 145
>01_02_0083 -
10959091-10959222,10959318-10959501,10959935-10960056,
10960143-10960472
Length = 255
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 134 HVRCSSPRVARTQWASARDSHRRFCDDG 217
H+RC S + W D RFC +G
Sbjct: 182 HLRCPSVGLVSASWKLMEDKDDRFCYNG 209
>08_02_0092 +
12265446-12265809,12266147-12266743,12266792-12266861,
12267325-12267427
Length = 377
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 67 PPTSSAAPHCPTPDVDKTHGATARAVLV 150
PPTS A P CP+ + G + A+ V
Sbjct: 85 PPTSPAPPQCPSRPIPPFAGPSIAAMAV 112
>04_03_0816 + 19992641-19993197,19994933-19995023,19997761-19998051
Length = 312
Score = 26.2 bits (55), Expect = 3.6
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -1
Query: 193 GVARARPLRSCYTR*RAPHVLWRRAFYRR-RELDSGGRRNWWGVSQRRRSVRIPQYGFER 17
G+A R RSC + A + WRR L GG W V +RRR R+ + R
Sbjct: 80 GMAVRRRWRSC-AKAEAQALRWRRGNEPAGTALAGGGASAGWLVGRRRRRQRVQEVRLAR 138
>06_02_0175 - 12624608-12625297
Length = 229
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 91 GGRRNWWGVSQRRR 50
GGRR WWG RR
Sbjct: 125 GGRRCWWGCGNGRR 138
>05_04_0146 + 18393447-18394043
Length = 198
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 46 RTAAAVIPPTSSAAPHCPTPDVDKTHGATARAVLVTACSTNAVG 177
R AAA + S++ P P+P +T A A A + + G
Sbjct: 93 REAAAAMAAASASPPWAPSPARGRTKAAVAPAAAAAVVAAASAG 136
>04_01_0037 + 444239-444667,444817-444825
Length = 145
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 106 DVDKTHGATARAVLVTACSTNAVGERARLPQ 198
D D+ + A ARAVLV A + + ARLP+
Sbjct: 38 DADEGNAAEARAVLVPALTPVSADLVARLPK 68
>03_01_0648 -
4749150-4749275,4749902-4749986,4750761-4750861,
4750933-4751191,4751382-4751434,4752828-4752990,
4753181-4754616
Length = 740
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +1
Query: 52 AAAVIPPT---SSAAPHCPTPDVDKTHGA 129
AAA++PP +SAA + PDV HGA
Sbjct: 164 AAALMPPQGSPASAAKNVYLPDVSAVHGA 192
>01_06_1833 + 40208360-40208587,40208677-40209024,40209101-40209676
Length = 383
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 49 TAAAVIPPTSSAAPHCPTPDVDKTHGATARAVLVTACSTNAVG 177
TA V TS+A+P PTP+ +A V AC+ A G
Sbjct: 22 TALIVFVFTSTASPAWPTPEATPATRQEKKAAAV-ACAPRAKG 63
>01_06_0941 +
33198528-33198778,33199216-33199288,33199405-33199452,
33199554-33199648,33200552-33200702
Length = 205
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 161 LHAVTSTARAVAPCVLSTSGVGQWG 87
L A TST+ A A SG+G WG
Sbjct: 30 LEASTSTSDATAATATRGSGLGPWG 54
>09_02_0100 + 4285475-4285760,4286179-4286285
Length = 130
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 127 RRAFYRRRELDSGGRRNWW 71
RR RR+ S GRR WW
Sbjct: 72 RRRMRRRQSGGSRGRRRWW 90
>08_02_1182 + 24992256-24992708,24992942-24993238
Length = 249
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 119 RTAPQHVRCSSPRVARTQWASARDSHRR 202
R PQH RC + R+ Q A+AR + R
Sbjct: 30 RHRPQHCRCPAHRLLLPQAAAARAARPR 57
>08_02_0983 -
23281787-23281931,23282045-23282163,23282765-23282871,
23284392-23284470,23285054-23285143,23285259-23285531,
23285617-23285769,23285969-23286290,23286428-23286672
Length = 510
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 112 RRRELDSGGRRNWWGVSQRRRSVRIP 35
RRR++ GG R+W Q+++ +R+P
Sbjct: 31 RRRDVGQGGGRDW----QKKKKLRLP 52
>05_03_0281 +
11560402-11560569,11561373-11561579,11562966-11563174,
11563261-11563309,11563611-11563673,11563799-11565472
Length = 789
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 64 IPPTSSAAPHCPTPDVDKTHGATARAVLV 150
+PP SS+ PTPD H ++++ +V
Sbjct: 423 VPPVSSSPQMWPTPDQGLLHSSSSQLRIV 451
>04_04_1574 -
34536744-34537136,34541247-34541405,34541497-34542411,
34543642-34543731,34544324-34544390,34544483-34544676,
34544770-34545510,34545596-34545661,34545783-34545908,
34545978-34546073,34546153-34546521,34546602-34546724,
34546802-34546906,34547394-34547531,34547665-34547760,
34548018-34548275
Length = 1311
Score = 25.4 bits (53), Expect = 6.3
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Frame = -3
Query: 146 STARAVAP---CVLSTS--GVGQWGAAELVGGITAAAVRPDTAVWV-RARV 12
+ A AV P C ST GVG A+ GG A R A WV RARV
Sbjct: 7 AAAAAVVPGVACGSSTRRVGVGNGNASAHAGGGCLAGGRRGAAAWVARARV 57
>02_05_0296 + 27639981-27640766
Length = 261
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 40 SGRTAAAVIPPTSSAAPHCPTPDVDKTHGATARAVLVTACSTNAVGERA 186
+G AAA P A+PH P+ DKT A A +T S+ R+
Sbjct: 19 AGLPAAASPGP---ASPHSPSEQGDKTAPGAATASTMTTASSGEPSPRS 64
>01_01_0840 - 6557931-6558377
Length = 148
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1
Query: 112 RRRELDSGGRRNWWGVSQRRRS 47
+RR D GG R W G+++RRRS
Sbjct: 123 KRRGRD-GGLRRWPGMTRRRRS 143
>11_06_0573 + 25088921-25089035,25089752-25089843,25089990-25091672
Length = 629
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 119 RTAPQHVRCSSPRVARTQWASA 184
RTA RC S RV +WASA
Sbjct: 9 RTARCRRRCRSQRVGGRRWASA 30
>11_04_0355 + 16705281-16706006
Length = 241
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 52 AAAVIPPTSSAA-PHCPTPDVDKTHGATARA 141
A A +PP +SA P P P+ ++T A A A
Sbjct: 154 AKAKVPPAASAGQPPPPPPNQEETSAAAAAA 184
>11_04_0334 - 16489768-16489796,16490588-16490936
Length = 125
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2
Query: 141 RTCCGAVRFIDV 106
R CCGAVR +DV
Sbjct: 67 RACCGAVRRVDV 78
>08_02_0936 - 22771416-22771702,22772297-22772393,22772951-22773847
Length = 426
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 128 APCVLSTSGVGQWGAAELVG 69
A C S G QWGA +VG
Sbjct: 331 AACTTSALGTRQWGAVFMVG 350
>08_02_0159 + 13403198-13403581
Length = 127
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 215 HRHKNVCGSRARSPTA 168
HRH++ C S AR P A
Sbjct: 54 HRHRSRCSSSARQPRA 69
>07_03_1591 +
27967065-27967090,27967236-27968054,27984940-27985022,
27985590-27985744,27985956-27986461,27986551-27986703,
27987146-27987485,27987558-27987822,27987897-27988634,
27989734-27989779,27989849-27990223,27991511-27991567,
27991640-27992438
Length = 1453
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 200 VCGSRARSPTAFVLHAVTSTARAVAPCVLST-SGVG 96
V ARS A V HA + A + CVL T SG G
Sbjct: 146 VMAVNARSTLAAVKHAARAMAPRCSGCVLCTSSGAG 181
>07_01_0528 - 3919291-3919556,3919623-3919686
Length = 109
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 73 WGVSQRRRSVRIPQYGFER 17
W V + R+V++P YGF R
Sbjct: 26 WMVFEVNRAVKVPSYGFFR 44
>06_02_0009 + 10561257-10561751
Length = 164
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 107 SGVGQWGAAELVGGITAAAVRPDTAVWVRAR 15
SG+G+WG + +G A VRP + V R
Sbjct: 53 SGIGEWGIGDRLGS-GALGVRPSGSTRVFGR 82
>05_01_0557 - 4879244-4879666
Length = 140
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 46 RTAAAVIPPTSSAAPHCPTP 105
R AA+++ P+SS+A PTP
Sbjct: 10 RAAASLLRPSSSSAAAAPTP 29
>03_05_1062 -
30043596-30043811,30044083-30044178,30044387-30044448,
30044990-30045023,30045220-30046173
Length = 453
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 6 RQDSRSNPYCGIRTDRRRC 62
+ S PY G+ T RRRC
Sbjct: 218 KASSEEAPYVGVETARRRC 236
>01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480
Length = 623
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 173 TAFVLHAVTSTARAVAPCVLSTSGVG 96
T+ VLH V +T AVA VL+TS +G
Sbjct: 72 TSEVLHQVYNTYGAVAVQVLTTSPLG 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,479,159
Number of Sequences: 37544
Number of extensions: 116532
Number of successful extensions: 739
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 14,793,348
effective HSP length: 51
effective length of database: 12,878,604
effective search space used: 257572080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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