Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_E16
         (288 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   1.7  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   4.0  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   4.0  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   4.0  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    20   5.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   5.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   5.3  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               20   7.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   9.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   9.2  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 63  INMIKTPRLCISAGLFYFTKIFPDLTLDVNITSLYSL 173
           +N   +P  C +    Y TKI PD+   +  T L  L
Sbjct: 16  LNATNSPHTCRTKNGDY-TKIMPDILTAIGQTPLIKL 51


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 211 NTICNYLKTKK 179
           N + NYLKTK+
Sbjct: 84  NKVVNYLKTKR 94


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 63  YS*FLFVFYENIPVFTKYSS 4
           Y  FLFV    +PVFT  SS
Sbjct: 65  YIGFLFVLGLIVPVFTIVSS 84


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 211 NTICNYLKTKK 179
           N + NYLKTK+
Sbjct: 84  NKVVNYLKTKR 94


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 73  LKHLDCVYLLDYFTLQRY 126
           L H +   LL YF LQR+
Sbjct: 195 LSHAEYSMLLVYFHLQRH 212


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 123 IFPDLTLDVNITSLYSL*FFFV 188
           ++P   L++  +S++S  FFF+
Sbjct: 362 VYPSAVLELPGSSIWSCLFFFM 383


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 123 IFPDLTLDVNITSLYSL*FFFV 188
           ++P   L++  +S++S  FFF+
Sbjct: 415 VYPSAVLELPGSSIWSCLFFFM 436


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 84  RLCISAGLFYFTKIFPDLTLDVNITSLY 167
           R CI A LF+   +  D   DV+   +Y
Sbjct: 53  RGCIEACLFHRLALMNDNVFDVSKFDVY 80


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 95  YTQSRCFNHIYILNSCSYFMKISLYSLNIPR 3
           +T+    NH Y + + +Y   +   SLN P+
Sbjct: 222 FTEDVGLNHFYFMLNHNYPPFMLSNSLNFPQ 252


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 95  YTQSRCFNHIYILNSCSYFMKISLYSLNIPR 3
           +T+    NH Y + + +Y   +   SLN P+
Sbjct: 222 FTEDVGLNHFYFMLNHNYPPFMLSNSLNFPQ 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,065
Number of Sequences: 438
Number of extensions: 1290
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)