Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_E14
         (221 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   1.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   1.8  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    20   3.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   4.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   4.1  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    19   9.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    19   9.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    19   9.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    19   9.5  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 1.4
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -3

Query: 201 ESFIISHHNSFESSAKQTNILEHIRLKELHTVWNHMGFSSQIN 73
           E  ++  H  F SS K ++ L+  R+K    +        Q+N
Sbjct: 652 EKLMMLKHREFRSSIKASDKLKDSRIKTTEKLSTDPNTHFQVN 694


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 1.8
 Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +2

Query: 35  VLFIAIGVPVYYVFIWLEKP-MWFQTVC 115
           +LF+ +G+P      W + P  W   +C
Sbjct: 80  LLFLILGLPFELSVFWQQYPWQWGLGIC 107


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 3.1
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 61  GILRIYLARETHVVPNSVQL 120
           G+  IYL    +++PN++ +
Sbjct: 41  GVPSIYLTYAKNILPNNISI 60


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 4.1
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 50  IGVPVYYVFIWLEKPMW 100
           IG+  YY F+    P W
Sbjct: 227 IGLNTYYFFLRQAFPFW 243


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 4.1
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 50  IGVPVYYVFIWLEKPMW 100
           IG+  YY F+    P W
Sbjct: 227 IGLNTYYFFLRQAFPFW 243


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 87  RNPCGSKQCATLLI*CAPKCL 149
           R P G  QC  +   C+  CL
Sbjct: 28  RQPDGMNQCQAVNGHCSHLCL 48


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 87  RNPCGSKQCATLLI*CAPKCL 149
           R P G  QC  +   C+  CL
Sbjct: 28  RQPDGMNQCQAVNGHCSHLCL 48


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 129 RLKELHTVWNHMGFSSQINT*YTGTPIAINKTPTPTA 19
           R++ L +V       +Q+NT  T    A+NK  T  A
Sbjct: 474 RVEILDSVDRLDNLMAQVNTEMTHLTNAVNKLKTSFA 510


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -2

Query: 220 RNNQINRILYH*PS*FLRIFS*TNKHFGAH 131
           R+N +  ++      F  + S T +HF  H
Sbjct: 702 RSNSMGAVMTRNSEMFSSLLSDTEQHFRQH 731


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,984
Number of Sequences: 438
Number of extensions: 1237
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3407265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)