Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_E13
         (487 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p pro...   206   1e-53
AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal pr...   206   1e-53
AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC...   206   1e-53
AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB...   206   1e-53
AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA...   206   1e-53
X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal prot...   206   2e-53
AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p pro...   171   3e-43
AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB...   171   3e-43

>AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p
           protein.
          Length = 156

 Score =  206 bits (503), Expect = 1e-53
 Identities = 95/135 (70%), Positives = 112/135 (82%)
 Frame = +2

Query: 14  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 193
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 194 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 373
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 374 RILTTQGRRDLDRIA 418
           R L++ G+RDLDRIA
Sbjct: 121 RKLSSIGQRDLDRIA 135


>AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal
           protein S19 protein.
          Length = 156

 Score =  206 bits (503), Expect = 1e-53
 Identities = 95/135 (70%), Positives = 112/135 (82%)
 Frame = +2

Query: 14  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 193
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 194 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 373
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 374 RILTTQGRRDLDRIA 418
           R L++ G+RDLDRIA
Sbjct: 121 RKLSSIGQRDLDRIA 135


>AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC,
           isoform C protein.
          Length = 156

 Score =  206 bits (503), Expect = 1e-53
 Identities = 95/135 (70%), Positives = 112/135 (82%)
 Frame = +2

Query: 14  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 193
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 194 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 373
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 374 RILTTQGRRDLDRIA 418
           R L++ G+RDLDRIA
Sbjct: 121 RKLSSIGQRDLDRIA 135


>AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB,
           isoform B protein.
          Length = 156

 Score =  206 bits (503), Expect = 1e-53
 Identities = 95/135 (70%), Positives = 112/135 (82%)
 Frame = +2

Query: 14  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 193
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 194 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 373
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 374 RILTTQGRRDLDRIA 418
           R L++ G+RDLDRIA
Sbjct: 121 RKLSSIGQRDLDRIA 135


>AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA,
           isoform A protein.
          Length = 156

 Score =  206 bits (503), Expect = 1e-53
 Identities = 95/135 (70%), Positives = 112/135 (82%)
 Frame = +2

Query: 14  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 193
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 194 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 373
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 374 RILTTQGRRDLDRIA 418
           R L++ G+RDLDRIA
Sbjct: 121 RKLSSIGQRDLDRIA 135


>X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal protein
           S19 protein.
          Length = 156

 Score =  206 bits (502), Expect = 2e-53
 Identities = 94/135 (69%), Positives = 112/135 (82%)
 Frame = +2

Query: 14  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 193
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD++KTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDPDWFYVRCASI 60

Query: 194 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 373
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 374 RILTTQGRRDLDRIA 418
           R L++ G+RDLDRIA
Sbjct: 121 RKLSSIGQRDLDRIA 135


>AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p
           protein.
          Length = 155

 Score =  171 bits (417), Expect = 3e-43
 Identities = 80/135 (59%), Positives = 99/135 (73%)
 Frame = +2

Query: 14  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 193
           M  VTVK+++Q  + K +AA LKK GK+ VP+    +KT +FKE AP D DWFY RCA+I
Sbjct: 1   MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60

Query: 194 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 373
           +RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS    RKALQALEA  +VE+  DGG
Sbjct: 61  MRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGG 120

Query: 374 RILTTQGRRDLDRIA 418
           R LT QG+R+LDRIA
Sbjct: 121 RKLTPQGQRNLDRIA 135


>AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB
           protein.
          Length = 155

 Score =  171 bits (417), Expect = 3e-43
 Identities = 80/135 (59%), Positives = 99/135 (73%)
 Frame = +2

Query: 14  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 193
           M  VTVK+++Q  + K +AA LKK GK+ VP+    +KT +FKE AP D DWFY RCA+I
Sbjct: 1   MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60

Query: 194 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 373
           +RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS    RKALQALEA  +VE+  DGG
Sbjct: 61  MRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGG 120

Query: 374 RILTTQGRRDLDRIA 418
           R LT QG+R+LDRIA
Sbjct: 121 RKLTPQGQRNLDRIA 135


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,337,684
Number of Sequences: 53049
Number of extensions: 432251
Number of successful extensions: 1080
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)